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Report for CCDS44841.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44841.1 Public Homo sapiens 12 AEBP2 24 110 108 CCDS HistoryNCBI Gene:121536Re-query CCDS DB by CCDS ID:44841.1Re-query CCDS DB by GeneID:121536See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44841.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398864.7 ENSP00000381840.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398864.7Link to Ensembl Protein Viewer:ENSP00000381840.3Re-query CCDS DB by Nucleotide ID:ENST00000398864Re-query CCDS DB by Protein ID:ENSP00000381840
Original member Current member NCBI NM_001114176.2 NP_001107648.1 Accepted alive Link to Nucleotide Sequence:NM_001114176.2Link to Protein Sequence:NP_001107648.1Re-query CCDS DB by Nucleotide ID:NM_001114176Re-query CCDS DB by Protein ID:NP_001107648Link to BLAST:NP_001107648.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001107648.1 517 Q6ZN18-1 517 100% 0 0

Chromosomal Locations for CCDS 44841.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 19439700 19440370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19462510 19462717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19473248 19473355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19493800 19493986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19500097 19500221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19512398 19512465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19514671 19514784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19518087 19518113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19518675 19518720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1554 nt):
ATGGCCGCCGCTATCACCGACATGGCCGACCTGGAGGAGCTCTCCCGCCTGAGCCCTCTGCCCCCCGGCA
GCCCGGGTTCGGCGGCGCGGGGCCGGGCTGAGCCCCCCGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGA
GGAGGCGGAGGCCGAGGCGGTGGCGGCGCTGCTGCTGAACGGCGGCAGCGGTGGGGGCGGCGGAGGCGGC
GGCGGAGGAGTGGGGGGCGGCGAGGCAGAGACGATGTCGGAGCCGAGCCCCGAGAGCGCCAGCCAGGCCG
GGGAGGACGAAGACGAGGAGGAGGACGACGAGGAGGAGGAAGATGAGAGCAGCAGCAGCGGCGGGGGTGA
GGAGGAGAGTAGCGCCGAGAGCCTGGTGGGCAGCAGCGGCGGGAGCAGCAGCGACGAGACCCGCTCGTTG
AGCCCCGGCGCCGCCAGCAGCAGCAGCGGGGATGGGGACGGCAAGGAGGGCCTGGAGGAGCCCAAGGGAC
CGCGGGGCAGCCAGGGCGGCGGCGGGGGCGGCAGCAGTAGCAGCAGCGTAGTCTCCAGCGGCGGCGACGA
GGGCTACGGGACTGGGGGAGGCGGAAGCAGCGCGACCTCCGGGGGCCGGCGGGGCAGCTTGGAGATGTCG
TCGGATGGGGAACCCCTGAGCCGCATGGACTCGGAGGACAGCATAAGCAGTACTATAATGGATGTAGACA
GCACAATTTCCAGTGGGCGTTCAACTCCAGCAATGATGAATGGACAAGGAAGCACTACTTCTTCAAGCAA
AAATATTGCCTATAATTGTTGTTGGGACCAGTGCCAGGCTTGCTTCAACTCTAGCCCAGATCTGGCAGAT
CACATCCGTTCCATACATGTAGATGGTCAGCGAGGAGGGGTATTTGTTTGCTTATGGAAAGGTTGTAAAG
TATATAACACTCCATCTACCAGTCAAAGTTGGTTACAAAGGCATATGCTGACACACAGTGGAGACAAACC
TTTCAAGTGTGTTGTTGGTGGCTGCAATGCCAGCTTTGCTTCTCAGGGAGGGCTAGCTCGTCATGTACCC
ACACACTTCAGTCAGCAGAACTCCTCAAAAGTTTCTAGCCAGCCAAAGGCCAAAGAAGAATCTCCTTCTA
AAGCTGGAATGAACAAAAGGAGGAAATTAAAGAACAAAAGACGACGCTCATTACCACGGCCACATGATTT
CTTCGATGCACAAACACTGGATGCGATAAGACATCGAGCCATATGCTTTAACCTCTCAGCTCATATAGAA
AGTTTAGGGAAGGGACACAGTGTTGTTTTTCATAGTACTGTAATAGCTAAGAGAAAAGAAGATTCTGGGA
AGATCAAACTTTTGCTTCATTGGATGCCTGAAGACATTCTGCCTGATGTGTGGGTGAATGAAAGTGAACG
ACATCAGTTAAAAACTAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTTTTGGACCCA
AACATATACAGAACAATGCCGCAGAAGAGGTTGAAGAGAACTCTGATAAGAAAAGTGTTCAATTTGTATT
TAAGCAAACAGTGA

Translation (517 aa):
MAAAITDMADLEELSRLSPLPPGSPGSAARGRAEPPEEEEEEEEEEEEAEAEAVAALLLNGGSGGGGGGG
GGGVGGGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEESSAESLVGSSGGSSSDETRSL
SPGAASSSSGDGDGKEGLEEPKGPRGSQGGGGGGSSSSSVVSSGGDEGYGTGGGGSSATSGGRRGSLEMS
SDGEPLSRMDSEDSISSTIMDVDSTISSGRSTPAMMNGQGSTTSSSKNIAYNCCWDQCQACFNSSPDLAD
HIRSIHVDGQRGGVFVCLWKGCKVYNTPSTSQSWLQRHMLTHSGDKPFKCVVGGCNASFASQGGLARHVP
THFSQQNSSKVSSQPKAKEESPSKAGMNKRRKLKNKRRRSLPRPHDFFDAQTLDAIRHRAICFNLSAHIE
SLGKGHSVVFHSTVIAKRKEDSGKIKLLLHWMPEDILPDVWVNESERHQLKTKVVHLSKLPKDTALLLDP
NIYRTMPQKRLKRTLIRKVFNLYLSKQ


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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