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Report for CCDS44319.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44319.1 Public Homo sapiens 1 TP53BP2 24 110 108 CCDS HistoryNCBI Gene:7159Re-query CCDS DB by CCDS ID:44319.1Re-query CCDS DB by GeneID:7159See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44319.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343537.12 ENSP00000341957.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343537.12Link to Ensembl Protein Viewer:ENSP00000341957.7Re-query CCDS DB by Nucleotide ID:ENST00000343537Re-query CCDS DB by Protein ID:ENSP00000341957
Original member Current member NCBI NM_001031685.3 NP_001026855.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001031685.3Link to Protein Sequence:NP_001026855.2Re-query CCDS DB by Nucleotide ID:NM_001031685Re-query CCDS DB by Protein ID:NP_001026855Link to BLAST:NP_001026855.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026855.2 1134 Q13625-3 1134 100% 0 0

Chromosomal Locations for CCDS 44319.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 223780853 223780894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223784115 223784314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223789008 223789174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223792389 223792522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223793303 223793440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223795815 223796590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223798215 223798677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223799899 223800047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223800700 223800810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223802116 223802344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223802731 223802895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223803271 223803452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223804174 223804348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223806846 223806947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223810431 223810513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223814240 223814353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223821220 223821367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 223845654 223845680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3405 nt):
ATGCGGTTCGGGTCCAAGATGATGCCGATGTTTCTTACCGTGTATCTCAGTAACAATGAGCAGCACTTCA
CAGAAGTTCCAGTTACTCCAGAAACAATATGCAGAGACGTGGTGGATCTGTGCAAAGAACCCGGCGAGAG
TGATTGCCATTTGGCTGAAGTGTGGTGTGGCTCTGAACGTCCAGTTGCGGATAATGAGCGAATGTTTGAT
GTTCTTCAACGATTTGGAAGTCAGAGGAACGAAGTTCGCTTCTTCCTTCGTCATGAACGCCCCCCTGGCA
GGGACATTGTGAGTGGACCAAGATCTCAGGATCCAAGTTTAAAAAGAAATGGTGTAAAAGTTCCTGGTGA
ATATCGAAGAAAGGAGAACGGTGTTAATAGTCCTAGGATGGATCTGACTCTTGCTGAACTTCAGGAAATG
GCATCTCGCCAGCAGCAACAGATTGAAGCCCAGCAACAATTGCTGGCAACTAAGGAACAGCGCTTAAAGT
TTTTGAAACAACAAGATCAGCGACAACAGCAACAAGTTGCTGAGCAGGAGAAACTTAAAAGGCTAAAAGA
AATAGCTGAGAATCAGGAAGCTAAGCTAAAAAAAGTGAGAGCACTTAAAGGCCACGTGGAACAGAAGAGA
CTAAGCAATGGGAAACTTGTGGAGGAAATTGAACAGATGAATAATTTGTTCCAGCAAAAACAGAGGGAGC
TCGTCCTGGCTGTGTCAAAAGTAGAAGAACTGACCAGGCAGCTAGAGATGCTCAAGAACGGCAGGATCGA
CAGCCACCATGACAATCAGTCTGCAGTGGCTGAGCTTGATCGCCTCTATAAGGAGCTGCAGCTAAGAAAC
AAATTGAATCAAGAGCAGAATGCCAAGCTACAACAACAGAGGGAGTGTTTGAATAAGCGTAATTCAGAAG
TGGCAGTCATGGATAAGCGTGTTAATGAGCTGAGGGACCGGCTGTGGAAGAAGAAGGCAGCTCTACAGCA
AAAAGAAAATCTACCAGTTTCATCTGATGGAAATCTTCCCCAGCAAGCCGCGTCAGCCCCAAGCCGTGTG
GCTGCAGTAGGTCCCTATATCCAGTCGTCTACTATGCCTCGGATGCCCTCAAGGCCTGAATTGCTGGTGA
AGCCAGCCCTGCCGGATGGTTCCTTGGTCATTCAGGCTTCAGAGGGGCCGATGAAAATACAGACACTGCC
CAACATGAGATCTGGGGCTGCTTCACAAACTAAAGGCTCTAAAATCCATCCAGTTGGCCCTGATTGGAGT
CCTTCAAATGCAGATCTTTTCCCAAGCCAAGGCTCTGCTTCTGTACCTCAAAGCACTGGGAATGCTCTGG
ATCAAGTTGATGATGGAGAGGTTCCGCTGAGGGAGAAAGAGAAGAAAGTGCGTCCGTTCTCAATGTTTGA
TGCAGTAGACCAGTCCAATGCCCCACCTTCCTTTGGTACTCTGAGGAAGAACCAGAGCAGTGAAGATATC
TTGCGGGATGCTCAGGTTGCAAATAAAAATGTGGCTAAAGTACCACCTCCTGTTCCTACAAAACCAAAAC
AGATTAATTTGCCTTATTTTGGACAAACTAATCAGCCACCTTCAGACATTAAGCCAGACGGAAGTTCTCA
GCAGTTGTCAACAGTTGTTCCGTCCATGGGAACTAAACCAAAACCAGCAGGGCAGCAGCCGAGAGTGCTG
CTATCTCCCAGCATACCTTCGGTTGGCCAAGACCAGACCCTTTCTCCAGGTTCTAAGCAAGAAAGTCCAC
CTGCTGCTGCCGTCCGGCCCTTTACTCCCCAGCCTTCCAAAGACACCTTACTTCCACCCTTCAGAAAACC
CCAGACCGTGGCAGCAAGTTCAATATATTCCATGTATACGCAACAGCAGGCGCCAGGAAAAAACTTCCAG
CAGGCTGTGCAGAGCGCGTTGACCAAGACTCATACCAGAGGGCCACACTTTTCAAGTGTATATGGTAAGC
CTGTAATTGCTGCTGCCCAGAATCAACAGCAGCACCCAGAGAACATTTATTCCAATAGCCAGGGCAAGCC
TGGCAGTCCAGAACCTGAAACAGAGCCTGTTTCTTCAGTTCAGGAGAACCATGAAAACGAAAGAATTCCT
CGGCCACTCAGCCCAACTAAATTACTGCCTTTCTTATCTAATCCTTACCGAAACCAGAGTGATGCTGACC
TAGAAGCCTTACGAAAGAAACTGTCTAACGCACCAAGGCCTCTAAAGAAACGTAGTTCTATTACAGAGCC
AGAGGGTCCTAATGGGCCAAATATTCAGAAGCTTTTATATCAGAGGACCACCATAGCGGCCATGGAGACC
ATCTCTGTCCCATCATACCCATCCAAGTCAGCTTCTGTGACTGCCAGCTCAGAAAGCCCAGTAGAAATCC
AGAATCCATATTTACATGTGGAGCCCGAAAAGGAGGTGGTCTCTCTGGTTCCTGAATCATTGTCCCCAGA
GGATGTGGGGAATGCCAGTACAGAGAACAGTGACATGCCAGCTCCTTCTCCAGGCCTTGATTATGAGCCT
GAGGGAGTCCCAGACAACAGCCCAAATCTCCAGAATAACCCAGAAGAACCAAATCCAGAGGCTCCACATG
TGCTTGATGTGTACCTGGAGGAGTACCCTCCATACCCACCCCCACCATACCCATCTGGGGAGCCTGAAGG
GCCCGGAGAAGACTCGGTGAGCATGCGCCCGCCTGAAATCACCGGGCAGGTCTCTCTGCCTCCTGGTAAA
AGGACAAACTTGCGTAAAACTGGCTCAGAGCGTATCGCTCATGGAATGAGGGTGAAATTCAACCCCCTTG
CTTTACTGCTAGATTCGTCTTTGGAGGGAGAATTTGACCTTGTACAGAGAATTATTTATGAGGTTGATGA
CCCAAGCCTCCCCAATGATGAAGGCATCACGGCTCTTCACAATGCTGTGTGTGCAGGCCACACAGAAATC
GTTAAGTTCCTGGTACAGTTTGGTGTAAATGTAAATGCTGCTGATAGTGATGGATGGACTCCATTACATT
GTGCTGCCTCATGTAACAACGTCCAAGTGTGTAAGTTTTTGGTGGAGTCAGGAGCCGCTGTGTTTGCCAT
GACCTACAGTGACATGCAGACTGCTGCAGATAAGTGCGAGGAAATGGAGGAAGGCTACACTCAGTGCTCC
CAATTTCTTTATGGAGTTCAGGAGAAGATGGGCATAATGAATAAAGGAGTCATTTATGCGCTTTGGGATT
ATGAACCTCAGAATGATGATGAGCTGCCCATGAAAGAAGGAGACTGCATGACAATCATCCACAGGGAAGA
CGAAGATGAAATCGAATGGTGGTGGGCGCGCCTTAATGATAAGGAGGGATATGTTCCACGTAACTTGCTG
GGACTGTACCCAAGAATTAAACCAAGACAAAGGAGCTTGGCCTGA

Translation (1134 aa):
MRFGSKMMPMFLTVYLSNNEQHFTEVPVTPETICRDVVDLCKEPGESDCHLAEVWCGSERPVADNERMFD
VLQRFGSQRNEVRFFLRHERPPGRDIVSGPRSQDPSLKRNGVKVPGEYRRKENGVNSPRMDLTLAELQEM
ASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQEAKLKKVRALKGHVEQKR
LSNGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQSAVAELDRLYKELQLRN
KLNQEQNAKLQQQRECLNKRNSEVAVMDKRVNELRDRLWKKKAALQQKENLPVSSDGNLPQQAASAPSRV
AAVGPYIQSSTMPRMPSRPELLVKPALPDGSLVIQASEGPMKIQTLPNMRSGAASQTKGSKIHPVGPDWS
PSNADLFPSQGSASVPQSTGNALDQVDDGEVPLREKEKKVRPFSMFDAVDQSNAPPSFGTLRKNQSSEDI
LRDAQVANKNVAKVPPPVPTKPKQINLPYFGQTNQPPSDIKPDGSSQQLSTVVPSMGTKPKPAGQQPRVL
LSPSIPSVGQDQTLSPGSKQESPPAAAVRPFTPQPSKDTLLPPFRKPQTVAASSIYSMYTQQQAPGKNFQ
QAVQSALTKTHTRGPHFSSVYGKPVIAAAQNQQQHPENIYSNSQGKPGSPEPETEPVSSVQENHENERIP
RPLSPTKLLPFLSNPYRNQSDADLEALRKKLSNAPRPLKKRSSITEPEGPNGPNIQKLLYQRTTIAAMET
ISVPSYPSKSASVTASSESPVEIQNPYLHVEPEKEVVSLVPESLSPEDVGNASTENSDMPAPSPGLDYEP
EGVPDNSPNLQNNPEEPNPEAPHVLDVYLEEYPPYPPPPYPSGEPEGPGEDSVSMRPPEITGQVSLPPGK
RTNLRKTGSERIAHGMRVKFNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEI
VKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS
QFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLL
GLYPRIKPRQRSLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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