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Report for CCDS44254.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44254.1 Public Homo sapiens 1 IGSF9 24 110 108 CCDS HistoryNCBI Gene:57549Re-query CCDS DB by CCDS ID:44254.1Re-query CCDS DB by GeneID:57549See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44254.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368094.6 ENSP00000357073.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368094.6Link to Ensembl Protein Viewer:ENSP00000357073.1Re-query CCDS DB by Nucleotide ID:ENST00000368094Re-query CCDS DB by Protein ID:ENSP00000357073
Original member Current member NCBI NM_001135050.2 NP_001128522.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135050.2Link to Protein Sequence:NP_001128522.1Re-query CCDS DB by Nucleotide ID:NM_001135050Re-query CCDS DB by Protein ID:NP_001128522Link to BLAST:NP_001128522.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128522.1 1179 Q9P2J2-1 1179 100% 0 0

Chromosomal Locations for CCDS 44254.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 159927345 159927526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159927760 159927887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159928158 159929018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159929351 159929393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159929638 159929814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159929891 159929975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159930189 159930439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159930692 159930867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159931138 159931261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159931453 159931603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159931812 159931928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159932512 159932652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159934190 159934332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159934425 159934570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159934681 159934822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159936399 159936516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159936754 159936908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159937686 159937838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159942963 159943151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159943397 159943454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3540 nt):
ATGGTGTGGTGCCTCGGCCTGGCCGTCCTCAGCCTGGTCATCAGCCAGGGGGCTGACGGTCGAGGGAAGC
CTGAGGTGGTATCGGTGGTGGGCCGGGCTGGGGAGAGTGTGGTGCTGGGCTGTGACCTGCTGCCCCCGGC
CGGCCGGCCCCCCCTGCATGTCATCGAGTGGCTGCGCTTTGGATTCCTGCTTCCCATCTTCATCCAGTTC
GGCCTCTACTCTCCCCGAATTGACCCTGATTACGTGGGACGAGTCCGGCTGCAGAAGGGGGCCTCTCTCC
AGATTGAGGGTCTCCGGGTGGAAGACCAGGGCTGGTACGAGTGCCGCGTGTTCTTCCTGGACCAGCACAT
CCCTGAAGACGATTTTGCTAACGGCTCCTGGGTGCATCTGACAGTCAATTCACCCCCTCAATTCCAGGAG
ACACCTCCTGCTGTGTTGGAAGTGCAGGAACTGGAGCCTGTGACCCTGCGTTGTGTGGCCCGTGGCAGCC
CCCTGCCTCATGTGACGTGGAAGCTCCGAGGAAAGGACCTTGGCCAGGGCCAGGGCCAGGTGCAAGTGCA
GAACGGGACGCTGCGGATCCGCCGGGTAGAGCGAGGCAGCTCTGGGGTCTACACCTGCCAAGCCTCCAGC
ACTGAGGGCAGCGCCACCCACGCCACCCAGCTGCTAGTGCTAGGACCCCCAGTCATCGTGGTGCCCCCCA
AGAACAGCACAGTCAATGCCTCCCAGGATGTTTCATTGGCCTGCCATGCTGAGGCATACCCTGCTAACCT
CACCTACAGCTGGTTCCAGGACAACATCAATGTCTTCCACATTAGCCGCCTGCAGCCCCGGGTGCGGATC
CTGGTGGACGGGAGCCTGCGGCTGCTGGCCACCCAGCCTGATGATGCCGGCTGCTACACCTGTGTGCCCA
GCAATGGCCTCCTGCATCCACCCTCAGCCTCTGCCTACCTCACTGTGCTCTACCCAGCCCAGGTGACAGC
TATGCCTCCTGAGACACCCCTGCCCATAGGCATGCCGGGGGTGATCCGCTGCCCGGTTCGTGCCAACCCC
CCACTGCTCTTTGTCAGCTGGACCAAGGATGGAAAGGCCCTGCAGCTGGACAAGTTCCCTGGCTGGTCCC
AGGGCACAGAAGGCTCACTGATCATCGCCCTGGGGAACGAGGATGCCCTGGGAGAATACTCCTGCACCCC
CTACAACAGTCTTGGTACCGCCGGGCCCTCTCCTGTGACCCGCGTGCTGCTCAAGGCTCCCCCAGCTTTT
ATAGAGCGGCCCAAGGAAGAATATTTCCAAGAAGTAGGGCGGGAGCTGCTCATCCCCTGCTCCGCCCAAG
GGGACCCTCCTCCTGTTGTCTCTTGGACCAAGGTGGGCCGGGGGCTGCAAGGCCAGGCCCAGGTGGACAG
CAACAGCAGCCTCATCCTGCGACCATTGACCAAGGAGGCCCACGGGCACTGGGAATGCAGTGCCAGCAAT
GCTGTGGCCCGAGTGGCCACCTCCACGAACGTCTACGTGCTGGGCACTAGCCCTCATGTTGTCACCAATG
TGTCCGTGGTGGCTTTGCCCAAGGGTGCCAATGTCTCCTGGGAGCCTGGCTTTGATGGTGGTTATCTGCA
GAGATTCAGTGTCTGGTACACCCCACTGGCCAAGCGTCCTGACCGAATGCACCATGACTGGGTGTCCTTG
GCAGTGCCTGTGGGGGCTGCTCACCTCCTAGTGCCAGGGCTGCAGCCCCACACCCAGTACCAGTTCAGCG
TGCTAGCTCAGAACAAGCTGGGGAGTGGTCCCTTCAGCGAAATCGTCTTGTCTGCTCCGGAAGGGCTTCC
TACCACGCCAGCTGCACCCGGGCTTCCCCCAACAGAGATACCGCCTCCCCTGTCCCCTCCGCGGGGTCTG
GTGGCAGTGAGGACACCCCGGGGGGTACTCCTGCATTGGGATCCCCCAGAGCTGGTCCCTAAGAGACTGG
ATGGCTACGTCTTGGAAGGCCGGCAAGGCTCCCAGGGCTGGGAGGTGCTGGACCCGGCTGTGGCAGGCAC
AGAAACAGAGCTGCTGGTGCCAGGCCTCATCAAGGATGTTCTCTACGAGTTCCGCCTCGTGGCCTTCGCG
GGCAGCTTCGTCAGCGACCCCAGCAACACGGCCAACGTCTCCACTTCCGGTCTGGAGGTCTACCCTTCGC
GCACGCAGCTGCCGGGCCTCCTGCCTCAGCCCGTGCTGGCCGGCGTGGTGGGCGGAGTCTGCTTTCTGGG
AGTGGCCGTCCTTGTGAGCATCCTGGCCGGCTGCCTCCTGAACCGGCGCAGGGCTGCCCGCCGCCGCCGC
AAGCGCCTCCGCCAAGATCCACCTCTTATCTTCTCTCCGACCGGGAAGTCAGCTGCACCCTCTGCTCTGG
GCTCAGGCAGTCCTGACAGCGTGGCGAAGCTGAAGCTCCAGGGATCCCCAGTCCCCAGCCTGCGCCAGAG
TCTGCTCTGGGGGGATCCTGCCGGAACTCCCAGCCCCCACCCGGATCCTCCATCTAGCCGGGGACCCTTA
CCTCTGGAGCCCATTTGCCGGGGCCCAGACGGGCGCTTTGTGATGGGGCCCACTGTGGCGGCCCCCCAGG
AAAGGTCAGGCCGGGAGCAGGCAGAACCTCGGACTCCAGCCCAGCGTCTGGCCCGGTCCTTTGACTGTAG
CAGCAGCAGCCCCAGTGGGGCACCCCAGCCCCTCTGCATTGAAGACATCAGCCCTGTGGCACCCCCTCCA
GCAGCCCCACCCAGTCCCTTGCCAGGTCCTGGACCCCTGCTCCAGTACCTGAGCCTGCCCTTCTTCCGAG
AGATGAATGTGGATGGGGACTGGCCCCCGCTTGAGGAGCCCAGCCCTGCTGCACCCCCAGATTACATGGA
TACCCGGCGCTGTCCCACCTCATCTTTCCTTCGTTCTCCAGAAACCCCTCCTGTATCCCCCAGGGAATCA
CTTCCTGGGGCTGTGGTAGGGGCTGGGGCCACTGCAGAGCCCCCTTACACAGCCCTGGCTGACTGGACAC
TGAGGGAGCGGCTGCTGCCAGGCCTTCTCCCTGCTGCCCCTCGAGGCAGCCTCACCAGCCAGAGCAGTGG
GCGAGGCAGCGCTTCGTTCCTGCGGCCCCCCTCCACAGCCCCCTCTGCAGGAGGCAGCTACCTCAGCCCT
GCTCCAGGAGACACCAGCAGCTGGGCCAGTGGCCCTGAGAGATGGCCCCGAAGGGAGCATGTGGTGACAG
TCAGCAAGAGGAGGAACACATCTGTGGACGAGAACTATGAGTGGGACTCAGAATTCCCTGGGGACATGGA
ATTGCTGGAGACTTTGCACCTGGGCTTGGCCAGCTCCCGGCTCAGACCTGAAGCTGAGCCAGAGCTAGGT
GTGAAGACTCCAGAGGAGGGCTGCCTCCTGAACACTGCCCATGTTACTGGCCCTGAGGCCCGCTGTGCTG
CCCTTCGGGAGGAATTCCTGGCCTTCCGCCGCCGCCGAGATGCTACTAGGGCTCGGCTACCAGCCTATCG
ACAGCCAGTCCCCCACCCCGAACAGGCCACTCTGCTGTGA

Translation (1179 aa):
MVWCLGLAVLSLVISQGADGRGKPEVVSVVGRAGESVVLGCDLLPPAGRPPLHVIEWLRFGFLLPIFIQF
GLYSPRIDPDYVGRVRLQKGASLQIEGLRVEDQGWYECRVFFLDQHIPEDDFANGSWVHLTVNSPPQFQE
TPPAVLEVQELEPVTLRCVARGSPLPHVTWKLRGKDLGQGQGQVQVQNGTLRIRRVERGSSGVYTCQASS
TEGSATHATQLLVLGPPVIVVPPKNSTVNASQDVSLACHAEAYPANLTYSWFQDNINVFHISRLQPRVRI
LVDGSLRLLATQPDDAGCYTCVPSNGLLHPPSASAYLTVLYPAQVTAMPPETPLPIGMPGVIRCPVRANP
PLLFVSWTKDGKALQLDKFPGWSQGTEGSLIIALGNEDALGEYSCTPYNSLGTAGPSPVTRVLLKAPPAF
IERPKEEYFQEVGRELLIPCSAQGDPPPVVSWTKVGRGLQGQAQVDSNSSLILRPLTKEAHGHWECSASN
AVARVATSTNVYVLGTSPHVVTNVSVVALPKGANVSWEPGFDGGYLQRFSVWYTPLAKRPDRMHHDWVSL
AVPVGAAHLLVPGLQPHTQYQFSVLAQNKLGSGPFSEIVLSAPEGLPTTPAAPGLPPTEIPPPLSPPRGL
VAVRTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFA
GSFVSDPSNTANVSTSGLEVYPSRTQLPGLLPQPVLAGVVGGVCFLGVAVLVSILAGCLLNRRRAARRRR
KRLRQDPPLIFSPTGKSAAPSALGSGSPDSVAKLKLQGSPVPSLRQSLLWGDPAGTPSPHPDPPSSRGPL
PLEPICRGPDGRFVMGPTVAAPQERSGREQAEPRTPAQRLARSFDCSSSSPSGAPQPLCIEDISPVAPPP
AAPPSPLPGPGPLLQYLSLPFFREMNVDGDWPPLEEPSPAAPPDYMDTRRCPTSSFLRSPETPPVSPRES
LPGAVVGAGATAEPPYTALADWTLRERLLPGLLPAAPRGSLTSQSSGRGSASFLRPPSTAPSAGGSYLSP
APGDTSSWASGPERWPRREHVVTVSKRRNTSVDENYEWDSEFPGDMELLETLHLGLASSRLRPEAEPELG
VKTPEEGCLLNTAHVTGPEARCAALREEFLAFRRRRDATRARLPAYRQPVPHPEQATLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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