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Report for CCDS44036.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44036.1 Public Homo sapiens 1 TTLL10 24 110 108 CCDS HistoryNCBI Gene:254173Re-query CCDS DB by CCDS ID:44036.1Re-query CCDS DB by GeneID:254173See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44036.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379289.6 ENSP00000368591.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379289.6Link to Ensembl Protein Viewer:ENSP00000368591.1Re-query CCDS DB by Nucleotide ID:ENST00000379289Re-query CCDS DB by Protein ID:ENSP00000368591
Original member Current member EBI ENST00000379290.6 ENSP00000368592.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000379290.6Link to Ensembl Protein Viewer:ENSP00000368592.1Re-query CCDS DB by Nucleotide ID:ENST00000379290Re-query CCDS DB by Protein ID:ENSP00000368592
Original member Current member NCBI NM_001130045.2 NP_001123517.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001130045.2Link to Protein Sequence:NP_001123517.1Re-query CCDS DB by Nucleotide ID:NM_001130045Re-query CCDS DB by Protein ID:NP_001123517Link to BLAST:NP_001123517.1
Original member Current member NCBI NM_001371649.1 NP_001358578.1 Accepted alive Link to Nucleotide Sequence:NM_001371649.1Link to Protein Sequence:NP_001358578.1Re-query CCDS DB by Nucleotide ID:NM_001371649Re-query CCDS DB by Protein ID:NP_001358578Link to BLAST:NP_001358578.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123517.1 673 Q6ZVT0-1 673 100% 0 0
NP_001358578.1 673 Q6ZVT0-1 673 100% 0 0

Chromosomal Locations for CCDS 44036.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 1179216 1179333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1179657 1179737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1180034 1180340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1180483 1180601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1180731 1180860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1181741 1181815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1182361 1182446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1182876 1183047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1183920 1184091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1184969 1185109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1196600 1196716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1197093 1197186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1197438 1197847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2022 nt):
ATGGACCACAGCTGCACCCGGTTCATCCACCGCCGGGGACCACCCACTCGGACCCGAGCCGGCTTCAAGA
GGGGCAAGAGGCCAAGGATCCAGCAGAGGCCTCGGGCTCGAGTCTCAGGGACCATCCCTGCGTCACGTCT
GCACCCAGCACCGGCCTCACAGCCCGGCCCCTGCCCTGCACCAGGCCACTGCCCTGTTGGCCCGGCCCAC
GAGAGGCCAATGGGGAGCAGCCAGGAGGAGGGACTCCGGTGTCAGCCAAGCCAGCCAGACCACGACGCAG
ATGGACACTGTGGGCCGGACCTGGAGGGGGCAGAAAGAGCCTCTGCCACACCCGGACCCCCTGGGCTCCT
GAACAGCCACCGGCCTGCAGACTCGGATGACACTAACGCCGCCGGGCCCTCAGCTGCCCTCCTGGAGGGG
CTCCTGCTGGGGGGTGGGAAGCCATCGCCCCACAGCACCCGGCCGGGGCCCTTCTTCTACATTGGAGGCA
GCAACGGGGCCACAATCATCAGCTCCTACTGCAAAAGCAAGGGCTGGCAGCGCATCCATGACAGCCGCCG
GGACGACTACACGCTGAAGTGGTGTGAGGTCAAGAGCCGAGACAGCTACGGCAGCTTCCGGGAAGGAGAG
CAGCTGCTGTACCAGCTTCCCAACAACAAGCTCCTCACCACCAAGATCGGGCTGCTCAGCACCCTTCGGG
GACGGGCACGGGCCATGAGCAAGGCCAGCAAGGTGCCGGGGGGGGTCCAGGCCAGGCTGGAAAAGGACGC
AGCAGCGCCCGCCCTGGAGGACCTCCCGTGGACAAGCCCAGGATACCTCAGGCCACAGAGGGTCCTGAGA
ATGGAAGAGTTTTTCCCAGAGACCTACCGCCTGGACCTCAAACACGAGAGAGAGGCCTTTTTCACCTTGT
TTGATGAAACCCAGATATGGATCTGCAAGCCCACAGCCTCCAACCAGGGCAAAGGCATCTTCCTGCTCCG
GAACCAGGAGGAAGTTGCCGCCCTGCAGGCCAAGACCCGGAGCATGGAGGACGACCCCATCCACCACAAG
ACGCCGTTCCGGGGGCCTCAGGCGCGGGTGGTGCAGAGGTACATCCAGAACCCGCTGCTGGTGGACGGGA
GAAAGTTTGACGTGCGCTCCTACCTGCTCATTGCCTGCACCACACCCTACATGATCTTCTTTGGCCACGG
CTATGCTCGCCTCACCCTTAGCCTTTACGACCCCCATTCCAGCGACCTCGGCGGCCACTTGACCAACCAG
TTCATGCAGAAGAAGAGCCCTCTGTACATGCTGCTGAAGGAGCACACGGTGTGGAGCATGGAACACCTCA
ACCGCTACATCAGTGACACGTTCTGGAAGGCCCGGGGCCTCGCCAAGGACTGGGTCTTCACCACCCTCAA
GAAGCGGATGCAGCAGATCATGGCCCACTGCTTTCTGGCCGCCAAGCCCAAGCTGGACTGCAAGCTGGGT
TACTTTGACCTCATTGGCTGTGACTTCCTGATTGATGACAACTTCAAGGTATGGCTGCTGGAGATGAATT
CTAACCCAGCCCTGCACACCAACTGCGAGGTCCTGAAGGAGGTCATCCCAGGTGTGGTCATCGAGACCCT
GGACCTGGTGCTCGAGACCTTCCGGAAGAGCCTGCGCGGCCAGAAGATGTTGCCTCTGCTGTCCCAGCGC
CGCTTCGTGCTCCTGCACAACGGTGAGGCCGACCCGCGGCCGCACCTGGGGGGCTCGTGCAGCCTCCGCC
GCTGGCCGCCCCTGCCCACCCGCCAGGCCAAGTCCTCCGGGCCACCCATGCCGCATGCCCCAGACCAGCC
GGGCGCCCGCAGGCCTGCGCCACCTCCCTTGGTGCCGCAGCGTCCCCGGCCACCCGGCCCCGACCTGGAC
AGCGCCCACGATGGGGAGCCCCAGGCCCCGGGCACGGAGCAGTCGGGCACAGGCAACAGGCACCCGGCGC
AAGAGCCTTCCCCGGGGACAGCCAAGGAGGAACGCGAGGAGCCTGAGAACGCGAGGCCCTAG

Translation (673 aa):
MDHSCTRFIHRRGPPTRTRAGFKRGKRPRIQQRPRARVSGTIPASRLHPAPASQPGPCPAPGHCPVGPAH
ERPMGSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLNSHRPADSDDTNAAGPSAALLEG
LLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSKGWQRIHDSRRDDYTLKWCEVKSRDSYGSFREGE
QLLYQLPNNKLLTTKIGLLSTLRGRARAMSKASKVPGGVQARLEKDAAAPALEDLPWTSPGYLRPQRVLR
MEEFFPETYRLDLKHEREAFFTLFDETQIWICKPTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHK
TPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIFFGHGYARLTLSLYDPHSSDLGGHLTNQ
FMQKKSPLYMLLKEHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLKKRMQQIMAHCFLAAKPKLDCKLG
YFDLIGCDFLIDDNFKVWLLEMNSNPALHTNCEVLKEVIPGVVIETLDLVLETFRKSLRGQKMLPLLSQR
RFVLLHNGEADPRPHLGGSCSLRRWPPLPTRQAKSSGPPMPHAPDQPGARRPAPPPLVPQRPRPPGPDLD
SAHDGEPQAPGTEQSGTGNRHPAQEPSPGTAKEEREEPENARP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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