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Report for CCDS43933.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43933.1 Public Homo sapiens X ZNF81 24 110 108 CCDS HistoryNCBI Gene:347344Re-query CCDS DB by CCDS ID:43933.1Re-query CCDS DB by GeneID:347344See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43933.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338637.13 ENSP00000341151.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338637.13Link to Ensembl Protein Viewer:ENSP00000341151.7Re-query CCDS DB by Nucleotide ID:ENST00000338637Re-query CCDS DB by Protein ID:ENSP00000341151
Original member Current member EBI ENST00000376954.6 ENSP00000366153.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376954.6Link to Ensembl Protein Viewer:ENSP00000366153.1Re-query CCDS DB by Nucleotide ID:ENST00000376954Re-query CCDS DB by Protein ID:ENSP00000366153
Original member Current member NCBI NM_001378152.1 NP_001365081.1 Accepted alive Link to Nucleotide Sequence:NM_001378152.1Link to Protein Sequence:NP_001365081.1Re-query CCDS DB by Nucleotide ID:NM_001378152Re-query CCDS DB by Protein ID:NP_001365081Link to BLAST:NP_001365081.1
Original member Current member NCBI NM_001378153.1 NP_001365082.1 Accepted alive Link to Nucleotide Sequence:NM_001378153.1Link to Protein Sequence:NP_001365082.1Re-query CCDS DB by Nucleotide ID:NM_001378153Re-query CCDS DB by Protein ID:NP_001365082Link to BLAST:NP_001365082.1
Original member Current member NCBI NM_007137.5 NP_009068.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007137.5Link to Protein Sequence:NP_009068.2Re-query CCDS DB by Nucleotide ID:NM_007137Re-query CCDS DB by Protein ID:NP_009068Link to BLAST:NP_009068.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001365081.1 661 P51508 661 100% 0 0
NP_001365082.1 661 P51508 661 100% 0 0
NP_009068.2 661 P51508 661 100% 0 0

Chromosomal Locations for CCDS 43933.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 47846268 47846321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47887999 47888125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47895845 47895940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47914924 47916632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1986 nt):
ATGCCAGCTAACGAGGACGCTCCCCAGCCAGGGGAACATGGCAGTGCCTGTGAGGTATCAGTGTCATTTG
AGGATGTGACTGTGGACTTCAGTAGAGAGGAGTGGCAGCAACTGGACTCTACTCAAAGACGCCTGTACCA
GGATGTAATGTTGGAGAACTACAGCCACCTGCTCTCAGTGGGGTTCGAAGTTCCTAAACCAGAGGTCATC
TTCAAGTTGGAGCAAGGAGAGGGGCCATGGACATTGGAAGGGGAAGCCCCACATCAGAGCTGTTCAGATG
GGAAATTTGGAATTAAGCCTTCCCAGAGGAGAATTTCTGGGAAATCTACATTTCATAGTGAAATGGAGGG
TGAAGACACAAGAGATGATTCATTATACTCTATTTTAGAAGAATTGTGGCAAGATGCTGAACAGATAAAG
AGATGTCAGGAAAAACACAACAAACTTCTGAGTCGCACTACTTTCCTCAATAAGAAAATATTGAATACAG
AGTGGGATTATGAATATAAAGACTTTGGAAAATTTGTTCATCCAAGCCCAAATCTCATTCTTTCACAGAA
AAGACCCCATAAACGTGATTCATTTGGGAAGAGTTTTAAGCATAATTTAGACTTACATATTCATAATAAA
AGCAATGCAGCAAAGAACCTGGATAAAACTATTGGGCATGGTCAAGTTTTTACCCAGAACTCTTCTTATA
GTCACCACGAAAATACACATACAGGAGTGAAGTTCTGTGAACGTAATCAATGTGGAAAAGTCCTCAGCCT
CAAACACTCACTCAGTCAAAATGTGAAATTTCCCATTGGAGAGAAAGCAAACACATGTACTGAATTTGGG
AAGATCTTCACCCAGAGGTCACATTTCTTTGCTCCTCAAAAAATTCATACTGTGGAAAAACCTCATGAGC
TTAGCAAATGTGTAAATGTTTTTACACAGAAGCCACTACTCAGTATATATCTGAGAGTTCATAGAGATGA
AAAACTCTACATATGTACTAAATGTGGGAAGGCCTTCATCCAGAATTCAGAATTAATTATGCATGAGAAA
ACTCATACTAGAGAGAAACCCTATAAATGCAATGAATGTGGGAAATCATTTTTCCAGGTGTCATCTCTAC
TCAGGCATCAGACAACTCATACTGGAGAAAAACTCTTTGAATGCAGTGAATGTGGTAAAGGCTTCTCCCT
GAACTCAGCCCTCAATATACATCAGAAAATTCACACTGGAGAGAGACATCACAAATGCAGTGAGTGTGGG
AAAGCCTTTACCCAAAAATCAACACTCAGGATGCATCAGAGAATTCATACAGGAGAGAGGTCCTATATCT
GTACTCAATGTGGGCAGGCCTTCATCCAGAAGGCACACTTGATTGCACATCAAAGAATTCATACTGGAGA
GAAGCCTTATGAATGCAGTGACTGTGGGAAATCTTTCCCTTCTAAGTCACAACTCCAGATGCATAAGAGA
ATTCATACAGGAGAGAAACCCTATATATGCACTGAATGTGGGAAGGCTTTCACCAACAGGTCAAATCTCA
ATACTCACCAGAAGTCTCATACTGGAGAAAAGTCTTATATATGTGCTGAATGTGGGAAGGCCTTCACCGA
CAGGTCAAATTTCAATAAACACCAGACCATTCACACTGGAGAGAAACCCTATGTTTGTGCTGATTGTGGG
AGGGCCTTCATCCAGAAGTCAGAGTTGATTACACATCAGAGAATTCATACTACAGAGAAGCCTTATAAAT
GTCCTGACTGTGAGAAATCCTTCTCCAAGAAACCACATCTCAAAGTACATCAACGAATTCACACAGGGGA
GAAACCATATATATGTGCAGAATGTGGGAAAGCCTTCACTGATAGGTCAAATTTCAATAAACATCAGACA
ATTCATACTGGAGATAAACCGTATAAATGCAGCGACTGTGGAAAGGGGTTCACCCAGAAATCAGTTCTCA
GTATGCATCGCAATATTCATACATGA

Translation (661 aa):
MPANEDAPQPGEHGSACEVSVSFEDVTVDFSREEWQQLDSTQRRLYQDVMLENYSHLLSVGFEVPKPEVI
FKLEQGEGPWTLEGEAPHQSCSDGKFGIKPSQRRISGKSTFHSEMEGEDTRDDSLYSILEELWQDAEQIK
RCQEKHNKLLSRTTFLNKKILNTEWDYEYKDFGKFVHPSPNLILSQKRPHKRDSFGKSFKHNLDLHIHNK
SNAAKNLDKTIGHGQVFTQNSSYSHHENTHTGVKFCERNQCGKVLSLKHSLSQNVKFPIGEKANTCTEFG
KIFTQRSHFFAPQKIHTVEKPHELSKCVNVFTQKPLLSIYLRVHRDEKLYICTKCGKAFIQNSELIMHEK
THTREKPYKCNECGKSFFQVSSLLRHQTTHTGEKLFECSECGKGFSLNSALNIHQKIHTGERHHKCSECG
KAFTQKSTLRMHQRIHTGERSYICTQCGQAFIQKAHLIAHQRIHTGEKPYECSDCGKSFPSKSQLQMHKR
IHTGEKPYICTECGKAFTNRSNLNTHQKSHTGEKSYICAECGKAFTDRSNFNKHQTIHTGEKPYVCADCG
RAFIQKSELITHQRIHTTEKPYKCPDCEKSFSKKPHLKVHQRIHTGEKPYICAECGKAFTDRSNFNKHQT
IHTGDKPYKCSDCGKGFTQKSVLSMHRNIHT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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