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Report for CCDS43768.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43768.2 Public Homo sapiens 8 ZFAT 24 110 108 CCDS HistoryNCBI Gene:57623Re-query CCDS DB by CCDS ID:43768.2Re-query CCDS DB by GeneID:57623See the combined annotation on chromosome 8 in Sequence Viewer

Public Note for CCDS 43768.1
The coding region has been updated to represent an alternative splicing pattern that is more supported by the available transcript and protein data.

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 43768.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000520727.5 ENSP00000427831.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520727.5Link to Ensembl Protein Viewer:ENSP00000427831.1Re-query CCDS DB by Nucleotide ID:ENST00000520727Re-query CCDS DB by Protein ID:ENSP00000427831
Original member Current member EBI ENST00000520214.5 ENSP00000428483.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520214.5Link to Ensembl Protein Viewer:ENSP00000428483.1Re-query CCDS DB by Nucleotide ID:ENST00000520214Re-query CCDS DB by Protein ID:ENSP00000428483
Original member Current member NCBI NM_001029939.4 NP_001025110.2 Accepted alive Link to Nucleotide Sequence:NM_001029939.4Link to Protein Sequence:NP_001025110.2Re-query CCDS DB by Nucleotide ID:NM_001029939Re-query CCDS DB by Protein ID:NP_001025110Link to BLAST:NP_001025110.2
Original member Current member NCBI NM_001167583.3 NP_001161055.1 Accepted alive Link to Nucleotide Sequence:NM_001167583.3Link to Protein Sequence:NP_001161055.1Re-query CCDS DB by Nucleotide ID:NM_001167583Re-query CCDS DB by Protein ID:NP_001161055Link to BLAST:NP_001161055.1
Original member Current member NCBI NM_001289394.2 NP_001276323.1 Accepted alive Link to Nucleotide Sequence:NM_001289394.2Link to Protein Sequence:NP_001276323.1Re-query CCDS DB by Nucleotide ID:NM_001289394Re-query CCDS DB by Protein ID:NP_001276323Link to BLAST:NP_001276323.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025110.2 1231 Q9P243-2 1231 100% 0 0
NP_001161055.1 1231 Q9P243-2 1231 100% 0 0
NP_001276323.1 1231 Q9P243-2 1231 100% 0 0

Chromosomal Locations for CCDS 43768.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 134478482 134478721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134509619 134509749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134512475 134512601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134520883 134521001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134532834 134532972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134565333 134565421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134583832 134584005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134588246 134588395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134590268 134590355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134600436 134600668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134601477 134602933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134608729 134608879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134610470 134610655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134637461 134637712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134657561 134657720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3696 nt):
ATGTGTAAATGTTGTAACCTCTTCTCACCAAATCAGTCGGAACTCCTCTCCCACGTTTCAGAGAAGCACA
TG
GAAGAAGGGGTTAATGTTGATGAGATTATTATTCCCCTTAGGCCTCTGAGTACACCTGAACCCCCCAA
C
TCAAGCAAAACCGGAGATGAGTTTTTGGTCATGAAGAGGAAGAGAGGCAGGCCTAAGGGGTCCACGAAG
AAG
TCCAGCACAGAAGAGGAGCTGGCAGAAAACATCGTGAGTCCGACTGAGGACAGCCCGCTGGCTCCGG
AG
GAAGGGAACAGCCTGCCTCCAAGCAGCTTGGAGTGTAGCAAGTGCTGTCGGAAGTTCTCCAACACGCG
C
CAGCTGCGGAAGCACATCTGCATTATCGTGCTGAATTTGGGTGAGGAGGAAGGAGAAGCAGGTAACGAG
TCT
GACCTTGAACTAGAAAAGAAGTGTAAGGAAGATGATCGGGAAAAAGCCTCGAAAAGACCACGGTCAC
AG
AAAACAGAGAAAGTCCAGAAGATCTCAGGAAAGGAGGCCAGACAGCTTTCTGGGGCGAAGAAACCCAT
C
ATAAGTGTGGTTTTAACTGCACACGAAGCAATTCCAGGTGCTACCAAGATTGTGCCAGTGGAGGCTGGG
CCC
CCTGAAACAGGAGCTACAAATTCTGAGACCACTTCAGCAGACCTGGTGCCTCGGAGAGGCTACCAGG
AA
TACGCCATTCAGCAGACACCTTATGAGCAACCAATGAAGTCAAGCAGGCTAGGTCCCACTCAGCTCAA
A
ATCTTCACTTGTGAATACTGCAACAAGGTCTTCAAGTTCAAGCACTCGCTGCAGGCCCACCTGAGGATC
CAC
ACCAATGAAAAGCCATACAAGTGCCCCCAGTGCAGCTATGCCAGTGCCATCAAGGCCAACCTCAATG
TG
CACCTGCGCAAGCACACTGGAGAGAAGTTCGCCTGCGACTATTGCTCGTTCACCTGCCTGAGCAAGGG
C
CACCTCAAGGTGCACATCGAGCGAGTGCACAAGAAGATCAAGCAGCACTGCCGCTTCTGCAAGAAGAAG
TAC
TCTGACGTCAAGAACCTCATCAAGCACATCCGAGACGCGCATGACCCACAGGACAAGAAGGTCAAAG
AG
GCCTTGGACGAGCTCTGCCTGATGACGAGGGAGGGCAAGCGGCAGCTGCTCTATGACTGCCACATCTG
T
GAGCGCAAGTTCAAGAACGAGCTGGACCGTGACCGCCATATGCTGGTCCACGGAGACAAGTGGCCTTTT
GCC
TGTGAGCTCTGTGGCCATGGGGCCACCAAGTACCAGGCGCTGGAACTGCATGTCAGGAAGCACCCCT
TC
GTGTACGTCTGTGCCGTCTGCCGCAAGAAGTTCGTCAGCTCCATCAGGCTGCGCACCCACATCAAAGA
G
GTGCACGGGGCTGCCCAGGAGGCCTTGGTCTTCACCAGTTCCATCAACCAGAGCTTCTGCCTCCTGGAA
CCT
GGTGGGGACATCCAGCAAGAAGCTCTGGGGGACCAGCTACAGCTGGTGGAAGAGGAGTTTGCCCTCC
AG
GGCGTGAATGCACTCAAGGAAGAGGCCTGTCCTGGGGACACTCAGCTGGAGGAGGGCCGGAAGGAGCC
G
GAGGCCCCTGGGGAAATGCCTGCCCCAGCTGTGCACCTGGCCTCCCCGCAGGCCGAAAGCACAGCCCTG
CCA
CCCTGTGAGCTGGAAACCACCGTGGTCTCCTCCTCAGACCTGCATTCTCAAGAGGTGGTTTCAGATG
AT
TTTTTGTTGAAAAATGATACCTCCTCCGCAGAGGCTCATGCTGCTCCTGAGAAGCCCCCAGACATGCA
G
CACAGAAGCTCAGTCCAGACGCAAGGTGAAGTGATCACACTACTGCTGTCCAAGGCCCAGAGTGCTGGG
TCA
GATCAGGAAAGCCATGGCGCCCAGAGCCCCCTAGGGGAAGGGCAGAACATGGCTGTGCTTTCAGCTG
GT
GACCCAGATCCCAGCAGGTGTCTCAGGTCAAACCCAGCTGAGGCCTCAGACCTCCTCCCTCCAGTAGC
T
GGTGGTGGGGACACCATCACACATCAGCCTGACTCTTGCAAAGCTGCCCCTGAGCACCGGTCAGGCATC
ACC
GCTTTCATGAAGGTCCTGAACAGTTTACAGAAGAAGCAAATGAACACCAGCTTGTGTGAGCGGATCC
GG
AAGGTTTATGGAGACCTGGAGTGTGAATACTGTGGCAAACTTTTTTGGTACCAAGTGCATTTTGATAT
G
CATGTCCGCACCCACACCCGGGAACATCTGTATTATTGCTCTCAGTGTCATTATTCTTCCATCACCAAA
AAC
TGCCTTAAACGCCACGTAATTCAGAAACACAGTAACATCTTGCTGAAGTGTCCCACCGATGGCTGTG
AC
TACTCAACTCCAGATAAATATAAGCTACAGGCACATCTTAAAGTTCACACAGCACTGGACAAAAGGAG
T
TATTCTTGTCCTGTTTGTGAAAAGTCTTTTTCAGAGGATCGATTGATAAAGTCACATATCAAGACCAAC
CAT
CCTGAGGTCTCCATGAGCACCATTTCTGAGGTTCTCGGGAGGAGGGTTCAGCTGAAAGGGCTAATTG
GA
AAGAGAGCCATGAAATGCCCATATTGTGACTTTTATTTCATGAAGAATGGCTCAGACCTTCAGCGTCA
T
ATTTGGGCTCATGAAGGTGTGAAGCCCTTCAAGTGTTCTTTGTGTGAGTATGCAACTCGTAGCAAGAGT
AAC
CTCAAGGCTCATATGAATCGTCACAGCACTGAGAAAACCCACCTATGTGACATGTGTGGCAAGAAAT
TC
AAATCAAAAGGGACACTGAAAAGTCACAAACTCCTTCACACTGCAGATGGGAAGCAGTTTAAGTGCAC
G
GTGTGTGACTACACAGCGGCCCAGAAGCCACAGCTGCTGCGGCACATGGAACAGCATGTCTCCTTCAAG
CCT
TTCCGCTGTGCCCATTGCCATTACTCCTGCAACATATCTGGCTCTCTGAAGCGGCACTACAACAGGA
AG
CACCCTAATGAGGAGTATGCCAACGTGGGCACCGGGGAGCTGGCAGCGGAGGTGCTCATCCAGCAAGG
T
GGTTTGAAGTGTCCTGTTTGCAGCTTTGTATATGGCACCAAATGGGAGTTCAATAGGCACTTGAAGAAC
AAA
CATGGCTTGAAGGTGGTGGAAATTGATGGAGACCCCAAGTGGGAGACAGCAACAGAAGCTCCTGAGG
AG
CCCTCCACCCAGTATCTCCACATCACAGAGGCCGAAGAAGACGTTCAAGGGACACAGGCAGCGGTGGC
C
GCGCTCCAGGACCTGAGATACACCTCTGAGAGTGGCGACCGACTGGACCCCACGGCCGTGAACATCCTG
CAG
CAGATCATTGAGCTGGGCGCCGAGACCCATGACGCCACTGCCCTTGCCTCGGTGGTTGCCATGGCAC
CA
GGGACGGTGACTGTGGTTAAGCAGGTCACCGAGGAGGAGCCCAGCTCCAACCACACGGTCATGATCCA
G
GAGACGGTCCAGCAAGCGTCCGTGGAGCTTGCCGAGCAGCACCACCTGGTGGTGTCCTCCGACGACGTG
GAG
GGCATTGAGACGGTGACTGTCTACACGCAGGGCGGGGAGGCCTCGGAGTTCATCGTCTACGTGCAGG
AG
GCCATGCAGCCTGTGGAGGAGCAGGCTGTGGAGCAGCCGGCCCAGGAACTCTAG


Translation (1231 aa):
MCKCCNLFSPNQSELLSHVSEKHMEEGVNVDEIIIPLRPLSTPEPPNSSKTGDEFLVMKRKRGRPKGSTK
K
SSTEEELAENIVSPTEDSPLAPEEGNSLPPSSLECSKCCRKFSNTRQLRKHICIIVLNLGEEEGEA
GNE
S
DLELEKKCKEDDREKASKRPRSQKTEKVQKISGKEARQLSGAKKPIISVVLTAHEAIP
GATKIVPVEAG
P
PETGATNSETTSADLVPRRGYQEYAIQQTPYEQPMKSS
RLGPTQLKIFTCEYCNKVFKFKHSLQAHLRI
H
TNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCLSKGHLKVHIERVHKKIKQHCRFCKKK
Y
SDVKNLIKHIRDAHDPQDKKVKEALDELCLMTREGKRQLLYDCHICERKFKNELDRDRHMLVHGDKWPF
A
CELCGHGATKYQALELHVRKHPFVYVCAVCRKKFVSSIRLRTHIKEVHGAAQEALVFTSSINQSFCLLE
P
GGDIQQEALGDQLQLVEEEFALQGVNALKEEACPGDTQLEEGRKEPEAPGEMPAPAVHLASPQAESTAL
P
PCELETTVVSSSDLHSQEVVSDDFLLKNDTSSAEAHAAPEKPPDMQHRSSVQTQGEVITLLLSKAQSAG
S
DQESHGAQSPLGEGQNMAVLSAGDPDPSRCLRSNPAEASDLLPPVAGGGDTITHQPDSCKAAPEHRSGI
T
AFMKVLNSLQKKQMNTSLCERIRKVYGDLECEYC
GKLFWYQVHFDMHVRTHTREHLYYCSQCHYSSITK
N
CLKRHVIQKHSNILLKCPTDGCDYSTPDKYKLQAHLKVHTAL
DKRSYSCPVCEKSFSEDRLIKSHIKTN
H
P
EVSMSTISEVLGRRVQLKGLIGKRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKS
N
LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTAD
GKQFKCTVCDYTAAQKPQLLRHMEQHVSFK
P
FRCAHCHYSCNISGSLKRHYNRKHPNEEYANVGTGELAAEVLIQQ
GGLKCPVCSFVYGTKWEFNRHLKN
K
HGLKVVEIDGDPKWE
TATEAPEEPSTQYLHITEAEEDVQGTQAAVAALQDLRYTSESGDRLDPTAVNIL
Q
QIIELGAETHDATALASVVAMAPGTVTVVKQ
VTEEEPSSNHTVMIQETVQQASVELAEQHHLVVSSDDV
E
GIETVTVYTQGGEASEFIVYVQEAMQPVEEQAVEQPAQEL




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser