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Report for CCDS43753.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43753.1 Public Homo sapiens 8 NBN 24 110 108 CCDS HistoryNCBI Gene:4683Re-query CCDS DB by CCDS ID:43753.1Re-query CCDS DB by GeneID:4683See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 43753.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409330.5 ENSP00000386924.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409330.5Link to Ensembl Protein Viewer:ENSP00000386924.1Re-query CCDS DB by Nucleotide ID:ENST00000409330Re-query CCDS DB by Protein ID:ENSP00000386924
Original member Current member EBI ENST00000523444.2 ENSP00000428252.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523444.2Link to Ensembl Protein Viewer:ENSP00000428252.2Re-query CCDS DB by Nucleotide ID:ENST00000523444Re-query CCDS DB by Protein ID:ENSP00000428252
Original member Current member EBI ENST00000517337.2 ENSP00000429971.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000517337.2Link to Ensembl Protein Viewer:ENSP00000429971.2Re-query CCDS DB by Nucleotide ID:ENST00000517337Re-query CCDS DB by Protein ID:ENSP00000429971
Original member Current member EBI ENST00000697298.1 ENSP00000513234.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000697298.1Link to Ensembl Protein Viewer:ENSP00000513234.1Re-query CCDS DB by Nucleotide ID:ENST00000697298Re-query CCDS DB by Protein ID:ENSP00000513234
Original member Current member EBI ENST00000697299.1 ENSP00000513235.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000697299.1Link to Ensembl Protein Viewer:ENSP00000513235.1Re-query CCDS DB by Nucleotide ID:ENST00000697299Re-query CCDS DB by Protein ID:ENSP00000513235
Original member Current member NCBI NM_001024688.3 NP_001019859.1 Accepted alive Link to Nucleotide Sequence:NM_001024688.3Link to Protein Sequence:NP_001019859.1Re-query CCDS DB by Nucleotide ID:NM_001024688Re-query CCDS DB by Protein ID:NP_001019859Link to BLAST:NP_001019859.1

Chromosomal Locations for CCDS 43753.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 89935582 89935612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89937026 89937075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89943253 89943366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89946140 89946295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89947824 89947892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89953244 89953691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89955283 89955555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89958725 89958854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89964410 89964507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89970364 89970557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89971173 89971290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89978220 89978323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89980734 89980893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 89981375 89981448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2019 nt):
ATGCAGAATGGCTTTTCCCGAACTTTGAAGTCGGGGGATGGTATTACTTTTGGAGTGTTTGGAAGTAAAT
TCAGAATAGAGTATGAGCCTTTGGTTGCATGCTCTTCTTGTTTAGATGTCTCTGGGAAAACTGCTTTAAA
TCAAGCTATATTGCAACTTGGAGGATTTACTGTAAACAATTGGACAGAAGAATGCACTCACCTTGTCATG
GTATCAGTGAAAGTTACCATTAAAACAATATGTGCACTCATTTGTGGACGTCCAATTGTAAAGCCAGAAT
ATTTTACTGAATTCCTGAAAGCAGTTGAGTCCAAGAAGCAGCCTCCACAAATTGAAAGTTTTTACCCACC
TCTTGATGAACCATCTATTGGAAGTAAAAATGTTGATCTGTCAGGACGGCAGGAAAGAAAACAAATCTTC
AAAGGGAAAACATTTATATTTTTGAATGCCAAACAGCATAAGAAATTGAGTTCCGCAGTTGTCTTTGGAG
GTGGGGAAGCTAGGTTGATAACAGAAGAGAATGAAGAAGAACATAATTTCTTTTTGGCTCCGGGAACGTG
TGTTGTTGATACAGGAATAACAAACTCACAGACCTTAATTCCTGACTGTCAGAAGAAATGGATTCAGTCA
ATAATGGATATGCTCCAAAGGCAAGGTCTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCGGTGATTT
TCATGACTACAAAGAATTACTGTGATCCTCAGGGCCATCCCAGTACAGGATTAAAGACAACAACTCCAGG
ACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAAAACTAATGCCAAGCGCCCCAGTGAACACTACAACA
TACGTAGCTGACACAGAATCAGAGCAAGCAGATACATGGGATTTGAGTGAAAGGCCAAAAGAAATCAAAG
TCTCCAAAATGGAACAAAAATTCAGAATGCTTTCACAAGATGCACCCACTGTAAAGGAGTCCTGCAAAAC
AAGCTCTAATAATAATAGTATGGTATCAAATACTTTGGCTAAGATGAGAATCCCAAACTATCAGCTTTCA
CCAACTAAATTGCCAAGTATAAATAAAAGTAAAGATAGGGCTTCTCAGCAGCAGCAGACCAACTCCATCA
GAAACTACTTTCAGCCGTCTACCAAAAAAAGGGAAAGGGATGAAGAAAATCAAGAAATGTCTTCATGCAA
ATCAGCAAGAATAGAAACGTCTTGTTCTCTTTTAGAACAAACACAACCTGCTACACCCTCATTGTGGAAA
AATAAGGAGCAGCATCTATCTGAGAATGAGCCTGTGGACACAAACTCAGACAATAACTTATTTACAGATA
CAGATTTAAAATCTATTGTGAAAAATTCTGCCAGTAAATCTCATGCTGCAGAAAAGCTAAGATCAAATAA
AAAAAGGGAAATGGATGATGTGGCCATAGAAGATGAAGTATTGGAACAGTTATTCAAGGACACAAAACCA
GAGTTAGAAATTGATGTGAAAGTTCAAAAACAGGAGGAAGATGTCAATGTTAGAAAAAGGCCAAGGATGG
ATATAGAAACAAATGACACTTTCAGTGATGAAGCAGTACCAGAAAGTAGCAAAATATCTCAAGAAAATGA
AATTGGGAAGAAACGTGAACTCAAGGAAGACTCACTATGGTCAGCTAAAGAAATATCTAACAATGACAAA
CTTCAGGATGATAGTGAGATGCTTCCAAAAAAGCTGTTATTGACTGAATTTAGATCACTGGTGATTAAAA
ACTCTACTTCCAGAAATCCATCTGGCATAAATGATGATTATGGTCAACTAAAAAATTTCAAGAAATTCAA
AAAGGTCACATATCCTGGAGCAGGAAAACTTCCACACATCATTGGAGGATCAGATCTAATAGCTCATCAT
GCTCGAAAGAATACAGAACTAGAAGAGTGGCTAAGGCAGGAAATGGAGGTACAAAATCAACATGCAAAAG
AAGAGTCTCTTGCTGATGATCTTTTTAGATACAATCCTTATTTAAAAAGGAGAAGATAA

Translation (672 aa):
MQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVM
VSVKVTIKTICALICGRPIVKPEYFTEFLKAVESKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIF
KGKTFIFLNAKQHKKLSSAVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQS
IMDMLQRQGLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNTTT
YVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLS
PTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPSLWK
NKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKP
ELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDK
LQDDSEMLPKKLLLTEFRSLVIKNSTSRNPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHH
ARKNTELEEWLRQEMEVQNQHAKEESLADDLFRYNPYLKRRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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