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Report for CCDS43565.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43565.1 Public Homo sapiens 7 MINDY4 24 110 108 CCDS HistoryNCBI Gene:84182Re-query CCDS DB by CCDS ID:43565.1Re-query CCDS DB by GeneID:84182See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43565.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265299.6 ENSP00000265299.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000265299.6Link to Ensembl Protein Viewer:ENSP00000265299.6Re-query CCDS DB by Nucleotide ID:ENST00000265299Re-query CCDS DB by Protein ID:ENSP00000265299
Original member Current member NCBI NM_032222.3 NP_115598.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032222.3Link to Protein Sequence:NP_115598.2Re-query CCDS DB by Nucleotide ID:NM_032222Re-query CCDS DB by Protein ID:NP_115598Link to BLAST:NP_115598.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115598.2 757 Q4G0A6 757 100% 0 0

Chromosomal Locations for CCDS 43565.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 30771494 30771556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30778432 30778551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30781977 30782212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30785749 30785992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30791165 30791574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30828679 30828737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30836658 30836764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30839200 30839316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30840760 30840848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30850454 30850555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30852216 30852279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30853394 30853459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30859257 30859324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30872243 30872306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30875495 30875656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30882181 30882361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30882921 30882993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30891957 30892005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2274 nt):
ATGGACAGCCTCTTCGTGGAGGAGGTGGCCGCCTCCTTGGTCAGGGAGTTCCTCAGCAGAAAGGGCTTAA
AGAAGACATGTGTGACCATGGACCAGGAACGCCCACGCTCTGACCTCAGCATAAACAACAGAAATGATCT
TCGAAAGGTTTTGCATCTTGAATTTCTCTATAAGGAGAACAAGGCAAAGGAAAATCCTCTAAAAACAAGC
CTTGAACTCATCACCAGATACTTTCTGGATCACTTTGGAAATACGGCTAACAATTTCACTCAAGATACCC
CAATCCCTGCACTCTCAGTTCCAAAGAAAAATAACAAAGTGCCATCAAGATGCTCAGAGACTACACTGGT
AAATATATATGACCTTTCAGATGAAGATGCAGGATGGAGAACATCATTGTCAGAAACAAGCAAAGCCAGA
CATGACAATCTTGATGGAGATGTACTTGGTAATTTTGTATCATCTAAAAGGCCCCCGCACAAAAGTAAGC
CCATGCAGACGGTCCCGGGTGAAACTCCTGTGTTGACTTCTGCATGGGAGAAGATAGACAAGCTTCACTC
GGAGCCTTCCTTGGATGTGAAGAGGATGGGAGAGAATTCCAGGCCAAAGTCTGGTCTGATTGTGCGAGGC
ATGATGTCTGGGCCCATCGCCAGCTCCCCACAGGATTCTTTTCACAGACACTATCTGAGACGGTCCTCAC
CGTCAAGCAGCTCCACCCAACCCCAAGAAGAGAGCCGGAAGGTCCCTGAGCTCTTTGTCTGCACCCAACA
GGACATTCTGGCTTCGAGCAACAGCTCCCCCTCCAGGACCTCCCTGGGTCAGCTTAGTGAACTGACCGTA
GAAAGGCAGAAAACCACTGCCAGCAGCCCTCCCCATCTGCCCAGCAAACGGCTGCCCCCATGGGACAGGG
CCAGGCCGAGGGATCCCTCCGAGGACACCCCAGCAGTGGACGGCAGCACAGACACGGACAGGATGCCCTT
GAAGCTCTACTTGCCTGGTGGTAATTCCAGGATGACCCAGGAGAGGCTGGAAAGAGCGTTCAAACGGCAG
GGCAGCCAGCCCGCACCTGTCAGGAAAAATCAGTTGCTGCCGTCTGACAAGGTGGATGGTGAGCTGGGTG
CCCTGCGGCTCGAGGATGTGGAGGATGAGTTGATAAGGGAAGAGGTCATCCTGTCGCCAGTCCCATCAGT
GCTCAAGTTGCAGACAGCATCAAAACCAATTGACCTCTCAGTAGCAAAGGAAATAAAGACCCTTCTGTTT
GGTTCCAGCTTTTGCTGTTTCAATGAAGAATGGAAACTTCAGAGTTTTTCCTTTAGTAACACAGCCTCAT
TAAAATACGGCATAGTGCAGAACAAGGGTGGTCCTTGCGGAGTCCTGGCAGCTGTCCAAGGCTGTGTCCT
ACAGAAACTCCTGTTTGAAGGAGATAGCAAAGCCGACTGTGCTCAGGGACTGCAGCCTTCAGATGCCCAC
CGGACCCGCTGCCTCGTCCTGGCCCTCGCAGACATTGTGTGGCGGGCAGGGGGCCGAGAGAGAGCCGTTG
TTGCACTGGCTTCGAGAACACAGCAGTTCAGTCCAACAGGGAAATACAAAGCAGATGGAGTCTTAGAAAC
ACTTACGCTTCACAGTTTGACCTGCTATGAGGACCTGGTGACTTTTCTTCAACAAAGCATTCATCAGTTT
GAAGTGGGCCCCTATGGCTGCATCCTGCTCACCCTTTCTGCCATCCTGTCCAGGTCTACAGAGCTCATCC
GCCAGGACTTTGATGTCCCCACCAGCCACCTGATTGGAGCACATGGCTACTGTACACAGGAACTTGTCAA
TCTGCTCCTGACTGGGAAAGCTGTGTCCAACGTTTTCAACGATGTGGTTGAGCTGGATTCTGGGGATGGG
AACATCACACTTCTCAGAGGCATTGCTGCACGCAGTGATATTGGCTTCTTATCTCTCTTTGAGCATTACA
ACATGTGCCAGGTTGGCTGCTTCCTGAAGACCCCGAGGTTCCCCATCTGGGTGGTTTGCAGTGAGAGCCA
CTTCAGCATCCTCTTTAGCCTGCAGCCGGGGCTCCTGCGTGACTGGAGGACTGAGAGGCTCTTTGACTTG
TACTACTACGATGGCCTGGCCAACCAGCAGGAGCAGATCCGGCTGACCATTGACACCACCCAAACCATCT
CTGAGGACACAGACAACGACCTTGTCCCACCCCTCGAGCTCTGCATCAGAACCAAGTGGAAGGGGGCATC
AGTGAACTGGAACGGCTCAGACCCCATCCTGTGA

Translation (757 aa):
MDSLFVEEVAASLVREFLSRKGLKKTCVTMDQERPRSDLSINNRNDLRKVLHLEFLYKENKAKENPLKTS
LELITRYFLDHFGNTANNFTQDTPIPALSVPKKNNKVPSRCSETTLVNIYDLSDEDAGWRTSLSETSKAR
HDNLDGDVLGNFVSSKRPPHKSKPMQTVPGETPVLTSAWEKIDKLHSEPSLDVKRMGENSRPKSGLIVRG
MMSGPIASSPQDSFHRHYLRRSSPSSSSTQPQEESRKVPELFVCTQQDILASSNSSPSRTSLGQLSELTV
ERQKTTASSPPHLPSKRLPPWDRARPRDPSEDTPAVDGSTDTDRMPLKLYLPGGNSRMTQERLERAFKRQ
GSQPAPVRKNQLLPSDKVDGELGALRLEDVEDELIREEVILSPVPSVLKLQTASKPIDLSVAKEIKTLLF
GSSFCCFNEEWKLQSFSFSNTASLKYGIVQNKGGPCGVLAAVQGCVLQKLLFEGDSKADCAQGLQPSDAH
RTRCLVLALADIVWRAGGRERAVVALASRTQQFSPTGKYKADGVLETLTLHSLTCYEDLVTFLQQSIHQF
EVGPYGCILLTLSAILSRSTELIRQDFDVPTSHLIGAHGYCTQELVNLLLTGKAVSNVFNDVVELDSGDG
NITLLRGIAARSDIGFLSLFEHYNMCQVGCFLKTPRFPIWVVCSESHFSILFSLQPGLLRDWRTERLFDL
YYYDGLANQQEQIRLTIDTTQTISEDTDNDLVPPLELCIRTKWKGASVNWNGSDPIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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