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Report for CCDS43429.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43429.1 Public Homo sapiens 6 ZNF391 24 110 108 CCDS HistoryNCBI Gene:346157Re-query CCDS DB by CCDS ID:43429.1Re-query CCDS DB by GeneID:346157See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43429.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000244576.9 ENSP00000244576.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000244576.9Link to Ensembl Protein Viewer:ENSP00000244576.4Re-query CCDS DB by Nucleotide ID:ENST00000244576Re-query CCDS DB by Protein ID:ENSP00000244576
Original member Current member NCBI NM_001076781.3 NP_001070249.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001076781.3Link to Protein Sequence:NP_001070249.1Re-query CCDS DB by Nucleotide ID:NM_001076781Re-query CCDS DB by Protein ID:NP_001070249Link to BLAST:NP_001070249.1
Original member Current member NCBI NM_001322288.2 NP_001309217.1 Accepted alive Link to Nucleotide Sequence:NM_001322288.2Link to Protein Sequence:NP_001309217.1Re-query CCDS DB by Nucleotide ID:NM_001322288Re-query CCDS DB by Protein ID:NP_001309217Link to BLAST:NP_001309217.1
Original member Current member NCBI NM_001322289.2 NP_001309218.1 Accepted alive Link to Nucleotide Sequence:NM_001322289.2Link to Protein Sequence:NP_001309218.1Re-query CCDS DB by Nucleotide ID:NM_001322289Re-query CCDS DB by Protein ID:NP_001309218Link to BLAST:NP_001309218.1
Original member Current member NCBI NM_001322293.2 NP_001309222.1 Accepted alive Link to Nucleotide Sequence:NM_001322293.2Link to Protein Sequence:NP_001309222.1Re-query CCDS DB by Nucleotide ID:NM_001322293Re-query CCDS DB by Protein ID:NP_001309222Link to BLAST:NP_001309222.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001070249.1 358 Q9UJN7 358 100% 0 0
NP_001309217.1 358 Q9UJN7 358 100% 0 0
NP_001309218.1 358 Q9UJN7 358 100% 0 0
NP_001309222.1 358 Q9UJN7 358 100% 0 0

Chromosomal Locations for CCDS 43429.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 27400371 27401447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1077 nt):
ATGGAAAGCCTCAGAGGGAATACTGCTCAGGGTCCTACAAATGAAGAAGACTATAAAAACGAAGGCCAAT
TATCAAGGCAAACAAAATGTCCTGCACAGAAGAAATCCTCTTTTGAGAACACAGTGGTCAGAAAAGTGTC
AGTGACACTCAAAGAAATTTTCACAGGGGAGGAAGGCCCTGAATCCAGTGAATTTAGTCTAAGCCCAAAC
CTTGACGCACAACAGAAAATTCCAAAGGGACATGGATCCCCAATATCTAGGAAAAACTCCAAAGATAATT
CAGACTTAATTAAACACCAAAGACTTTTCTCACAAAGAAAACCTTGTAAATGCAATGAATGTGAAAAAGC
CTTTAGTTACCAATCAGACCTTCTTGTACACAGTAGAATTCATGGTGGAGAAAAGCCTTTTGAATGCAAC
AAATGTGGGAAATCTTTCAGCCGAAGTACACACCTTATTGAACATCAAAGAACTCACACTGGAGAGAAAC
CTTATGAATGCAATGAATGTGGAAAAGCTTTTAGCCGGAGCACACATCTTAGTCTACATCAGAGAATCCA
TACTGGAGAAAAACCATATGAATGTAGTGAATGTGGAAAAGCCTTTAGCCGAAGCACTAACCTTAGTCAG
CATCAGCGAACTCATACTCAAGAAAGGCCTTACAAATGTAATGAATGTGGGAAAGCCTTCGGTGACCGTT
CAACCATAATTCAGCATCAACGAATACACACTGGAGAGAATCCCTATGAATGCAGTAAATGTGGAAAAGC
TTTCAGTTGGATCTCATCGCTTACTGAACATCAGAGAACACACACTGGGGAGAACCCCTATGAGTGCAGT
GAATGTGGGAAAGTGTTCAGTCGAAGCTCGTCTCTTACAGAACATCAGAGAATCCACAGTGGAGAAAAGC
CTCACGAGTGTAGAGTGTGTGGAAAGGGCTTCAGTCGAAGCTCATCCCTTATTATTCATCAGAGAACTCA
TACCGGGGAGAAGCCGTACAAATGTAATGACTGTGGAAAAGCCTTCTGTCAGAGTTCAACTCTGATCAGA
CATCAGCACCTTCATACTAAAGAGTAA

Translation (358 aa):
MESLRGNTAQGPTNEEDYKNEGQLSRQTKCPAQKKSSFENTVVRKVSVTLKEIFTGEEGPESSEFSLSPN
LDAQQKIPKGHGSPISRKNSKDNSDLIKHQRLFSQRKPCKCNECEKAFSYQSDLLVHSRIHGGEKPFECN
KCGKSFSRSTHLIEHQRTHTGEKPYECNECGKAFSRSTHLSLHQRIHTGEKPYECSECGKAFSRSTNLSQ
HQRTHTQERPYKCNECGKAFGDRSTIIQHQRIHTGENPYECSKCGKAFSWISSLTEHQRTHTGENPYECS
ECGKVFSRSSSLTEHQRIHSGEKPHECRVCGKGFSRSSSLIIHQRTHTGEKPYKCNDCGKAFCQSSTLIR
HQHLHTKE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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