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Report for CCDS42492.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42492.1 Public Homo sapiens 19 NDUFA7 24 110 108 CCDS HistoryNCBI Gene:4701Re-query CCDS DB by CCDS ID:42492.1Re-query CCDS DB by GeneID:4701See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42492.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301457.3 ENSP00000301457.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301457.3Link to Ensembl Protein Viewer:ENSP00000301457.1Re-query CCDS DB by Nucleotide ID:ENST00000301457Re-query CCDS DB by Protein ID:ENSP00000301457
Original member Current member EBI ENST00000598884.1 ENSP00000470609.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000598884.1Link to Ensembl Protein Viewer:ENSP00000470609.1Re-query CCDS DB by Nucleotide ID:ENST00000598884Re-query CCDS DB by Protein ID:ENSP00000470609
Original member Current member EBI ENST00000593729.5 ENSP00000470962.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000593729.5Link to Ensembl Protein Viewer:ENSP00000470962.1Re-query CCDS DB by Nucleotide ID:ENST00000593729Re-query CCDS DB by Protein ID:ENSP00000470962
Original member Current member NCBI NM_005001.5 NP_004992.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005001.5Link to Protein Sequence:NP_004992.2Re-query CCDS DB by Nucleotide ID:NM_005001Re-query CCDS DB by Protein ID:NP_004992Link to BLAST:NP_004992.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004992.2 113 O95182 113 100% 0 0

Chromosomal Locations for CCDS 42492.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 8311505 8311595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8316496 8316645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8320857 8320906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8321308 8321358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (342 nt):
ATGGCGTCCGCCACCCGTCTCATCCAGCGGCTGCGGAACTGGGCGTCCGGGCATGACCTGCAGGGGAAGC
TGCAGCTACGCTACCAGGAGATCTCCAAGCGAACTCAGCCTCCTCCCAAGCTCCCTGTGGGTCCTAGCCA
CAAGCTCTCCAACAATTACTATTGCACTCGCGATGGCCGCCGGGAATCTGTGCCCCCTTCCATCATCATG
TCGTCGCAGAAGGCGCTGGTGTCAGGCAAGCCAGCAGAGAGCTCTGCTGTAGCTGCCACTGAGAAGAAGG
CGGTGACTCCAGCTCCTCCCATAAAGAGGTGGGAGCTGTCCTCGGACCAGCCTTACCTGTGA

Translation (113 aa):
MASATRLIQRLRNWASGHDLQGKLQLRYQEISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRESVPPSIIM
SSQKALVSGKPAESSAVAATEKKAVTPAPPIKRWELSSDQPYL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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