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Report for CCDS42411.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42411.1 Public Homo sapiens 18 ANKRD12 24 110 108 CCDS HistoryNCBI Gene:23253Re-query CCDS DB by CCDS ID:42411.1Re-query CCDS DB by GeneID:23253See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42411.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400020.7 ENSP00000382897.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400020.7Link to Ensembl Protein Viewer:ENSP00000382897.3Re-query CCDS DB by Nucleotide ID:ENST00000400020Re-query CCDS DB by Protein ID:ENSP00000382897
Original member Current member NCBI NM_001083625.3 NP_001077094.1 Accepted alive Link to Nucleotide Sequence:NM_001083625.3Link to Protein Sequence:NP_001077094.1Re-query CCDS DB by Nucleotide ID:NM_001083625Re-query CCDS DB by Protein ID:NP_001077094Link to BLAST:NP_001077094.1
Original member Current member NCBI NM_001204056.1 NP_001190985.1 Accepted alive Link to Nucleotide Sequence:NM_001204056.1Link to Protein Sequence:NP_001190985.1Re-query CCDS DB by Nucleotide ID:NM_001204056Re-query CCDS DB by Protein ID:NP_001190985Link to BLAST:NP_001190985.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001077094.1 2039 Q6UB98-2 2039 100% 0 0
NP_001190985.1 2039 Q6UB98-2 2039 100% 0 0

Chromosomal Locations for CCDS 42411.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 9182433 9182519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9195551 9195698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9208657 9208803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9211584 9211784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9216758 9216900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9221852 9221999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9254211 9258931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9263790 9263888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9275524 9275667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9279549 9279644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9280941 9281126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6120 nt):
ATGCCCAAATCTGGGTTCACAAAACCAATTCAGAGTGAAAATTCTGACAGTGACAGCAATATGGTAGAGA
AACCATATGGAAGAAAGAGTAAAGACAAGATTGCATCCTACAGCAAAACTCCAAAAATTGAACGAAGTGA
TGTGAGCAAGGAGATGAAAGAGAAATCATCCATGAAACGTAAACTTCCTTTTACTATTAGCCCATCAAGA
AATGAAGAACGAGATTCAGACACAGAGAAAGAAGGTCCAGAAAAGAAGAAGACAAAAAAGGAAGCTGGAA
ATAAGAAATCCACACCAGTTAGCATTCTTTTTGGTTATCCACTCTCTGAGCGAAAACAGATGGCACTTCT
TATGCAGATGACAGCAAGAGACAACAGTCCAGATTCCACACCAAATCATCCATCACAAACAACGCCTGCC
CAAAAGAAAACTCCCAGTTCTTCATCTCGACAGAAAGATAAAGTTAATAAAAGAAATGAACGTGGTGAAA
CTCCTTTACACATGGCTGCTATTCGAGGAGATGTGAAACAAGTTAAAGAATTAATAAGTTTAGGGGCAAA
TGTGAATGTGAAAGATTTTGCAGGTTGGACACCACTGCATGAAGCTTGCAATGTTGGATATTACGATGTT
GCTAAGATACTTATAGCAGCTGGAGCAGATGTTAACACACAAGGATTAGATGATGACACTCCACTCCATG
ATTCTGCTAGTAGTGGGCACAGAGATATAGTAAAGCTGTTACTTCGTCACGGTGGAAATCCATTTCAAGC
TAATAAACATGGGGAGCGTCCAGTGGATGTAGCAGAAACAGAGGAGTTGGAGTTGCTACTAAAAAGAGAG
GTGCCTTTATCTGATGATGATGAAAGTTACACAGATTCCGAAGAGGCTCAATCTGTAAATCCTTCTAGTG
TTGATGAAAATATTGACTCTGAAACAGAGAAAGACTCTCTCATCTGTGAAAGTAAACAGATACTTCCCAG
TAAAACACCTCTTCCATCTGCCCTTGATGAGTATGAGTTCAAAGATGATGATGATGAAGAAATTAATAAG
ATGATTGATGATAGGCATATTCTTAGGAAAGAACAACGAAAAGAAAATGAACCTGAAGCAGAAAAAACTC
ATTTATTTGCAAAACAGGAGAAAGCCTTCTATCCTAAATCATTTAAAAGTAAAAAACAAAAGCCATCTAG
GGTCTTATATTCAAGTACTGAAAGTTCTGATGAAGAAGCTCTTCAGAATAAAAAGATTTCTACTTCATGT
TCCGTCATCCCTGAAACATCAAATTCTGATATGCAAACCAAAAAGGAATATGTAGTTTCAGGTGAACACA
AACAGAAAGGCAAAGTTAAAAGAAAATTGAAAAATCAGAATAAAAATAAAGAGAACCAAGAGCTAAAGCA
AGAAAAGGAAGGAAAAGAAAATACAAGAATAACAAACTTGACAGTAAATACTGGACTAGATTGTTCAGAA
AAGACCAGAGAGGAGGGGAACTTTAGGAAATCTTTTAGCCCAAAAGATGATACTTCATTACATTTATTTC
ATATTTCCACTGGTAAATCTCCCAAACATTCTTGTGGATTAAGTGAAAAACAGTCAACACCACTAAAACA
AGAACATACTAAAACATGTTTATCACCAGGAAGTTCTGAAATGTCATTACAGCCTGATCTTGTTCGGTAT
GATAATACAGAATCTGAATTCTTGCCAGAAAGTTCAAGTGTAAAATCTTGTAAGCATAAGGAAAAAAGCA
AACATCAGAAAGATTTCCACTTAGAATTTGGTGAAAAATCAAATGCCAAAATAAAGGATGAAGATCATAG
TCCAACATTTGAAAATTCAGATTGCACACTGAAAAAAATGGATAAAGAAGGTAAAACATTAAAAAAACAT
AAATTGAAGCATAAAGAGAGGGAAAAAGAAAAGCATAAAAAAGAAATTGAAGGTGAAAAGGAAAAATACA
AAACTAAGGATAGTGCCAAAGAACTGCAGAGGAGTGTGGAATTTGATAGAGAATTTTGGAAAGAGAATTT
TTTTAAAAGTGATGAAACTGAAGATCTCTTTTTAAATATGGAACATGAATCCTTAACATTAGAAAAAAAA
TCAAAATTGGAAAAAAACATCAAAGATGATAAATCAACCAAGGAAAAGCATGTGTCAAAAGAGAGGAACT
TTAAAGAGGAACGAGACAAGATTAAAAAGGAAAGCGAGAAATCTTTTAGGGAGGAAAAAATAAAAGATCT
AAAAGAAGAGAGAGAAAACATACCCACAGATAAAGACTCAGAATTTACTTCTTTGGGTATGAGTGCCATT
GAGGAATCTATAGGGCTTCATTTAGTGGAAAAGGAAATAGACATTGAAAAACAAGAAAAGCATATAAAGG
AAAGTAAAGAAAAACCTGAGAAGCGATCTCAAATTAAAGAAAAGGACATTGAGAAGATGGAAAGAAAAAC
CTTTGAAAAAGAAAAGAAGATAAAACATGAGCATAAGTCAGAAAAAGACAAATTAGATCTTAGTGAATGT
GTTGATAAAATAAAAGAAAAGGACAAGCTATATTCGCATCACACAGAAAAATGCCATAAAGAAGGTGAGA
AGAGCAAAAATACTGCTGCTATTAAAAAAACTGACGACAGAGAGAAAAGTAGAGAAAAGATGGATAGGAA
ACATGACAAAGAAAAGCCTGAAAAAGAGAGGCATCTAGCAGAAAGCAAAGAAAAGCACTTGATGGAGAAA
AAAAATAAACAATCAGATAATAGTGAATACAGTAAATCAGAAAAAGGCAAAAATAAAGAAAAAGACAGGG
AGCTAGATAAAAAGGAAAAATCTAGAGATAAAGAAAGTATAAATATAACTAACTCCAAACACATACAGGA
AGAAAAAAAATCAAGTATAGTAGACGGTAATAAAGCACAACATGAAAAACCCTTATCCCTTAAAGAAAAA
ACAAAAGATGAACCTTTGAAAACTCCAGATGGAAAAGAAAAAGATAAAAAAGATAAAGATATAGATAGAT
ACAAAGAACGAGACAAACATAAAGATAAAATTCAAATAAATAGCTTACTCAAACTAAAATCTGAAGCAGA
TAAGCCTAAACCTAAGTCATCACCAGCATCAAAAGATACCCGACCTAAAGAAAAGAGGTTAGTGAATGAT
GATTTAATGCAGACAAGTTTTGAACGAATGCTAAGCCTTAAAGACCTAGAAATAGAACAGTGGCACAAAA
AACATAAGGAAAAAATTAAGCAAAAAGAAAAGGAACGGTTGAGAAACCGAAACTGTTTAGAACTTAAAAT
AAAAGATAAAGAAAAAACAAAGCATACACCAACTGAATCCAAAAATAAAGAACTTACTAGGTCAAAGAGT
TCAGAAGTGACTGATGCATATACCAAGGAGAAACAACCTAAAGATGCTGTAAGTAACAGATCACAATCTG
TTGACACCAAAAATGTAATGACTTTAGGGAAGTCATCTTTTGTTTCAGATAATAGCTTAAACAGGTCTCC
TAGATCAGAAAATGAAAAGCCGGGTCTCAGCTCCAGATCTGTATCCATGATTTCTGTTGCTAGTTCAGAA
GATTCCTGCCATACTACAGTGACAACCCCAAGGCCTCCAGTTGAGTATGACTCTGACTTTATGTTAGAGA
GTTCAGAATCCCAAATGTCCTTTTCCCAGTCACCTTTTTTGTCAATTGCCAAATCTCCTGCTCTTCATGA
AAGGGAATTGGACAGCCTGGCTGACTTGCCGGAGCGGATTAAACCACCATATGCAAACAGACTTTCAACA
TCCCATCTTAGGTCATCTTCTGTAGAAGATGTTAAACTAATTATAAGCGAGGGGAGACCTACCATAGAAG
TTCGAAGATGTAGCATGCCTTCTGTCATTTGTGAACATACCAAACAATTCCAAACAATATCAGAAGAGAG
CAATCAAGGTAGCTTATTAACTGTGCCAGGAGATACTAGTCCTTCTCCCAAACCTGAGGTATTCTCAAAT
GTGCCTGAAAGAGACCTTTCAAATGTATCTAACATACATTCCAGTTTTGCAACTTCTCCAACTGGAGCTT
CAAACAGCAAGTATGTTTCAGCTGATAGAAATCTCATCAAGAATACTGCCCCAGTGAACACTGTAATGGA
CAGTCCAGTGCATTTAGAGCCATCTAGTCAGGTTGGTGTGATCCAGAATAAATCATGGGAGATGCCTGTT
GATAGACTAGAGACATTAAGCACCAGAGACTTTATCTGCCCAAATTCTAACATACCTGATCAAGAATCCT
CTCTTCAGAGTTTTTGTAATTCTGAAAATAAGGTATTGAAAGAAAATGCTGATTTTTTATCCCTGCGCCA
GACTGAACTGCCAGGAAACTCTTGTGCTCAGGATCCGGCATCCTTTATGCCTCCACAGCAGCCTTGCTCT
TTCCCCAGCCAATCACTTTCAGATGCTGAATCGATTTCTAAACATATGTCTTTGTCATATGTTGCTAATC
AAGAGCCAGGTATTTTACAACAAAAAAATGCAGTTCAGATTATTAGTTCTGCTTTAGATACTGATAATGA
ATCTACAAAAGATACAGAAAATACTTTTGTCCTAGGAGATGTTCAAAAAACAGATGCCTTTGTCCCAGTG
TACTCTGACAGCACTATTCAAGAAGCATCACCAAACTTTGAGAAAGCTTATACTTTACCTGTGTTACCAT
CAGAAAAGGACTTTAATGGAAGTGATGCCTCTACCCAGCTAAATACACATTATGCATTTAGCAAACTAAC
TTACAAGTCTTCCAGTGGCCATGAAGTTGAGAATAGCACAACTGATACTCAGGTCATTTCACATGAAAAA
GAAAACAAACTGGAGAGTTTGGTTTTAACTCATTTGAGTAGGTGTGATTCTGATTTATGTGAAATGAATG
CAGGGATGCCAAAAGGAAACCTAAATGAACAAGATCCAAAACATTGTCCTGAAAGTGAAAAGTGTTTGCT
TTCCATAGAAGATGAGGAATCTCAACAAAGCATTTTATCAAGTCTGGAAAACCATTCACAGCAGTCAACT
CAACCAGAAATGCATAAATATGGTCAGTTAGTTAAAGTAGAATTAGAAGAAAATGCCGAAGATGATAAAA
CTGAAAACCAAATCCCTCAAAGAATGACTAGAAACAAAGCAAATACAATGGCAAATCAAAGCAAACAGAT
TCTTGCTAGCTGTACACTATTATCAGAAAAAGACAGTGAATCCTCATCTCCTAGAGGAAGAATAAGATTA
ACTGAAGATGACGATCCTCAAATTCACCATCCACGGAAAAGGAAAGTGTCACGTGTACCTCAGCCTGTGC
AAGTGAGTCCCTCTTTACTACAAGCAAAAGAGAAAACTCAGCAATCTCTGGCAGCCATTGTAGATTCTCT
AAAACTAGATGAGATTCAGCCATACAGTTCAGAGAGAGCAAATCCATATTTTGAATACTTGCACATAAGG
AAAAAAATAGAAGAAAAACGCAAATTACTGTGTAGTGTGATTCCTCAAGCACCTCAGTACTATGACGAAT
ATGTAACATTTAACGGATCATATCTCCTGGATGGAAACCCCTTAAGCAAGATTTGTATTCCCACAATTAC
ACCACCACCTTCACTGTCAGATCCACTTAAAGAGCTTTTTCGACAACAGGAAGTTGTAAGGATGAAACTA
CGTTTGCAACACAGTATTGAAAGGGAAAAACTCATTGTATCCAACGAACAAGAAGTTTTGCGAGTTCATT
ACAGAGCTGCAAGAACATTGGCAAATCAAACACTGCCATTTAGTGCTTGTACTGTTTTGCTGGATGCCGA
AGTATACAATGTACCATTGGACTCTCAGTCTGATGACAGTAAAACTTCTGTGAGGGATCGCTTTAATGCA
AGACAATTCATGTCTTGGTTACAAGATGTGGATGATAAATTTGACAAATTAAAGACCTGTCTTTTAATGA
GGCAACAACATGAAGCTGCGGCTTTAAATGCTGTCCAGAGGTTAGAATGGCAGCTCAAACTCCAGGAACT
TGATCCTGCCACCTATAAATCTATCAGCATTTACGAAATCCAGGAGTTTTATGTTCCCCTTGTTGATGTT
AACGACGACTTTGAATTGACTCCTATATAG

Translation (2039 aa):
MPKSGFTKPIQSENSDSDSNMVEKPYGRKSKDKIASYSKTPKIERSDVSKEMKEKSSMKRKLPFTISPSR
NEERDSDTEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHPSQTTPA
QKKTPSSSSRQKDKVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDV
AKILIAAGADVNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETEELELLLKRE
VPLSDDDESYTDSEEAQSVNPSSVDENIDSETEKDSLICESKQILPSKTPLPSALDEYEFKDDDDEEINK
MIDDRHILRKEQRKENEPEAEKTHLFAKQEKAFYPKSFKSKKQKPSRVLYSSTESSDEEALQNKKISTSC
SVIPETSNSDMQTKKEYVVSGEHKQKGKVKRKLKNQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSE
KTREEGNFRKSFSPKDDTSLHLFHISTGKSPKHSCGLSEKQSTPLKQEHTKTCLSPGSSEMSLQPDLVRY
DNTESEFLPESSSVKSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLKKMDKEGKTLKKH
KLKHKEREKEKHKKEIEGEKEKYKTKDSAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLEKK
SKLEKNIKDDKSTKEKHVSKERNFKEERDKIKKESEKSFREEKIKDLKEERENIPTDKDSEFTSLGMSAI
EESIGLHLVEKEIDIEKQEKHIKESKEKPEKRSQIKEKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSEC
VDKIKEKDKLYSHHTEKCHKEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERHLAESKEKHLMEK
KNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQHEKPLSLKEK
TKDEPLKTPDGKEKDKKDKDIDRYKERDKHKDKIQINSLLKLKSEADKPKPKSSPASKDTRPKEKRLVND
DLMQTSFERMLSLKDLEIEQWHKKHKEKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKNKELTRSKS
SEVTDAYTKEKQPKDAVSNRSQSVDTKNVMTLGKSSFVSDNSLNRSPRSENEKPGLSSRSVSMISVASSE
DSCHTTVTTPRPPVEYDSDFMLESSESQMSFSQSPFLSIAKSPALHERELDSLADLPERIKPPYANRLST
SHLRSSSVEDVKLIISEGRPTIEVRRCSMPSVICEHTKQFQTISEESNQGSLLTVPGDTSPSPKPEVFSN
VPERDLSNVSNIHSSFATSPTGASNSKYVSADRNLIKNTAPVNTVMDSPVHLEPSSQVGVIQNKSWEMPV
DRLETLSTRDFICPNSNIPDQESSLQSFCNSENKVLKENADFLSLRQTELPGNSCAQDPASFMPPQQPCS
FPSQSLSDAESISKHMSLSYVANQEPGILQQKNAVQIISSALDTDNESTKDTENTFVLGDVQKTDAFVPV
YSDSTIQEASPNFEKAYTLPVLPSEKDFNGSDASTQLNTHYAFSKLTYKSSSGHEVENSTTDTQVISHEK
ENKLESLVLTHLSRCDSDLCEMNAGMPKGNLNEQDPKHCPESEKCLLSIEDEESQQSILSSLENHSQQST
QPEMHKYGQLVKVELEENAEDDKTENQIPQRMTRNKANTMANQSKQILASCTLLSEKDSESSSPRGRIRL
TEDDDPQIHHPRKRKVSRVPQPVQVSPSLLQAKEKTQQSLAAIVDSLKLDEIQPYSSERANPYFEYLHIR
KKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDGNPLSKICIPTITPPPSLSDPLKELFRQQEVVRMKL
RLQHSIEREKLIVSNEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYNVPLDSQSDDSKTSVRDRFNA
RQFMSWLQDVDDKFDKLKTCLLMRQQHEAAALNAVQRLEWQLKLQELDPATYKSISIYEIQEFYVPLVDV
NDDFELTPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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