NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Tuesday, December 17, 2024, starting at 8:00 a.m. EST for up to 60 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS42082.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42082.1 Public Homo sapiens 15 UNC45A 24 110 108 CCDS HistoryNCBI Gene:55898Re-query CCDS DB by CCDS ID:42082.1Re-query CCDS DB by GeneID:55898See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 42082.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394275.7 ENSP00000377816.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394275.7Link to Ensembl Protein Viewer:ENSP00000377816.2Re-query CCDS DB by Nucleotide ID:ENST00000394275Re-query CCDS DB by Protein ID:ENSP00000377816
Original member Current member NCBI NM_001039675.2 NP_001034764.1 Accepted alive Link to Nucleotide Sequence:NM_001039675.2Link to Protein Sequence:NP_001034764.1Re-query CCDS DB by Nucleotide ID:NM_001039675Re-query CCDS DB by Protein ID:NP_001034764Link to BLAST:NP_001034764.1
Original member Current member NCBI NM_001323621.2 NP_001310550.1 Accepted alive Link to Nucleotide Sequence:NM_001323621.2Link to Protein Sequence:NP_001310550.1Re-query CCDS DB by Nucleotide ID:NM_001323621Re-query CCDS DB by Protein ID:NP_001310550Link to BLAST:NP_001310550.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034764.1 929 Q9H3U1-2 929 100% 0 0
NP_001310550.1 929 Q9H3U1-2 929 100% 0 0

Chromosomal Locations for CCDS 42082.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 90935325 90935330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90935544 90935705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90935946 90935982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90936285 90936460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90939731 90939823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90940306 90940473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90942437 90942605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90942912 90943082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90944892 90945063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90946614 90946914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90947796 90947890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90948142 90948283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90948654 90948794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90949316 90949443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90949654 90949720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90950154 90950267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90950500 90950615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90952929 90953046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90953155 90953310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90953459 90953716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2790 nt):
ATGACTGCCAGCTCAGTGGAGCAGCTGCGGAAGGAGGGCAATGAGCTGTTCAAATGTGGAGACTACGGGG
GCGCCCTGGCGGCCTACACTCAGGCCCTGGGTCTGGACGCGACGCCCCAGGACCAGGCCGTTCTGCACCG
GAACCGGGCCGCCTGCCACCTCAAGCTGGAAGATTACGACAAAGCAGAAACAGAGGCATCCAAAGCCATT
GAAAAGGATGGTGGGGATGTCAAAGCACTCTACCGGCGGAGCCAAGCCCTAGAGAAGCTGGGCCGCCTGG
ACCAGGCTGTCCTTGACCTGCAGAGATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCCAGGAGGCCTT
GCGGAACATCGGGGGCCAGATTCAGGAGAAGGTGCGATACATGTCCTCGACGGATGCCAAAGTGGAACAG
ATGTTTCAGATACTGTTGGACCCAGAAGAGAAGGGCACTGAGAAAAAGCAAAAGGCTTCTCAGAACCTGG
TGGTGCTGGCCAGGGAGGATGCTGGAGCGGAGAAGATCTTCCGGAGTAATGGGGTTCAGCTCTTGCAACG
TTTACTGGACATGGGAGAGACTGACCTCATGCTGGCGGCTCTGCGTACGCTGGTTGGCATTTGCTCTGAG
CATCAGTCACGGACAGTGGCAACCCTGAGCATACTGGGAACTCGGCGAGTAGTCTCCATCCTGGGCGTGG
AAAGCCAGGCTGTGTCCCTGGCTGCCTGCCACCTGCTGCAGGTTATGTTTGATGCCCTCAAGGAAGGTGT
CAAAAAAGGCTTCCGAGGCAAAGAAGGTGCCATCATTGTGGATCCTGCCCGGGAGCTGAAGGTCCTCATC
AGTAACCTCTTAGATCTGCTGACAGAGGTGGGGGTCTCTGGCCAAGGCCGAGACAATGCCCTGACCCTCC
TGATTAAAGCGGTGCCCCGGAAGTCTCTCAAGGACCCCAACAACAGCCTCACCCTCTGGGTCATCGACCA
AGGTCTGAAAAAGATTTTGGAAGTGGGGGGCTCTCTACAGGACCCTCCTGGGGAGCTCGCAGTGACCGCA
AACAGCCGCATGAGCGCCTCTATTCTCCTCAGCAAGCTCTTTGATGACCTCAAGTGTGATGCGGAGAGGG
AGAATTTCCACAGACTTTGTGAAAACTACATCAAGAGCTGGTTTGAGGGCCAAGGGCTGGCCGGGAAGCT
ACGGGCCATCCAGACGGTGTCCTGCCTCCTGCAGGGCCCATGTGACGCTGGCAACCGGGCCTTGGAGCTG
AGCGGTGTCATGGAGAGTGTGATTGCTCTGTGTGCCTCTGAGCAGGAGGAGGAGCAGCTGGTGGCCGTGG
AGGCTCTGATCCATGCAGCCGGCAAGGCTAAGCGGGCCTCATTCATCACTGCCAATGGTGTCTCGCTGCT
GAAGGACCTATATAAGTGCAGCGAGAAGGACAGCATCCGCATCCGGGCGCTAGTGGGACTCTGTAAGCTC
GGTTCGGCTGGAGGGACTGACTTCAGCATGAAGCAGTTTGCTGAAGGCTCCACTCTCAAACTGGCTAAGC
AGTGTCGAAAGTGGCTGTGCAATGACCAGATCGACGCAGGCACTCGGCGCTGGGCAGTGGAGGGCCTGGC
TTACCTGACCTTTGATGCCGACGTGAAGGAAGAGTTTGTGGAGGATGCGGCTGCTCTGAAAGCTCTGTTC
CAGCTCAGCAGGTTGGAGGAGAGGTCAGTGCTCTTTGCGGTGGCCTCAGCGCTGGTGAACTGCACCAACA
GCTATGACTACGAGGAGCCCGACCCCAAGATGGTGGAGCTGGCCAAGTATGCCAAGCAGCATGTGCCCGA
GCAGCACCCCAAGGACAAGCCAAGCTTCGTGCGGGCTCGGGTGAAGAAGCTGCTGGCAGCGGGTGTGGTG
TCGGCCATGGTGTGCATGGTGAAGACGGAGAGCCCTGTGCTGACCAGTTCCTGCAGAGAGCTGCTCTCCA
GGGTCTTCTTGGCTTTAGTGGAAGAGGTAGAGGACCGAGGCACTGTGGTTGCCCAGGGAGGCGGCAGGGC
GCTGATCCCGCTGGCCCTGGAAGGCACGGACGTGGGGCAGACAAAGGCAGCCCAGGCCCTTGCCAAGCTC
ACCATCACCTCCAACCCGGAGATGACCTTCCCTGGCGAGCGGATCTATGAGGTGGTCCGGCCCCTCGTCT
CCCTGTTGCACCTCAACTGCTCAGGCCTGCAGAACTTCGAGGCGCTCATGGCCCTAACAAACCTGGCTGG
GATCAGCGAGAGGCTCCGGCAGAAGATCCTGAAGGAGAAGGCTGTGCCCATGATAGAAGGCTACATGTTT
GAGGAGCATGAGATGATCCGCCGGGCAGCCACGGAGTGCATGTGTAACTTGGCCATGAGCAAGGAGGTGC
AGGACCTCTTCGAAGCCCAGGGCAATGACCGACTGAAGCTGCTGGTGCTGTACAGTGGAGAGGATGATGA
GCTGCTACAGCGGGCAGCTGCCGGGGGCTTGGCCATGCTTACCTCCATGCGGCCCACGCTCTGCAGCCGC
ATTCCCCAAGTGACCACACACTGGCTGGAGATCCTGCAGGCCCTGCTTCTGAGCTCCAACCAGGAGCTGC
AGCACCGGGGTGCTGTGGTGGTGCTGAACATGGTGGAGGCCTCGAGGGAGATTGCCAGCACCCTGATGGA
GAGTGAGATGATGGAGATCTTGTCAGTGCTAGCTAAGGGTGACCACAGCCCTGTCACAAGGGCTGCTGCA
GCCTGCCTGGACAAAGCAGTGGAATATGGGCTTATCCAACCCAACCAAGATGGAGAGTGA

Translation (929 aa):
MTASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAI
EKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIGGQIQEKVRYMSSTDAKVEQ
MFQILLDPEEKGTEKKQKASQNLVVLAREDAGAEKIFRSNGVQLLQRLLDMGETDLMLAALRTLVGICSE
HQSRTVATLSILGTRRVVSILGVESQAVSLAACHLLQVMFDALKEGVKKGFRGKEGAIIVDPARELKVLI
SNLLDLLTEVGVSGQGRDNALTLLIKAVPRKSLKDPNNSLTLWVIDQGLKKILEVGGSLQDPPGELAVTA
NSRMSASILLSKLFDDLKCDAERENFHRLCENYIKSWFEGQGLAGKLRAIQTVSCLLQGPCDAGNRALEL
SGVMESVIALCASEQEEEQLVAVEALIHAAGKAKRASFITANGVSLLKDLYKCSEKDSIRIRALVGLCKL
GSAGGTDFSMKQFAEGSTLKLAKQCRKWLCNDQIDAGTRRWAVEGLAYLTFDADVKEEFVEDAAALKALF
QLSRLEERSVLFAVASALVNCTNSYDYEEPDPKMVELAKYAKQHVPEQHPKDKPSFVRARVKKLLAAGVV
SAMVCMVKTESPVLTSSCRELLSRVFLALVEEVEDRGTVVAQGGGRALIPLALEGTDVGQTKAAQALAKL
TITSNPEMTFPGERIYEVVRPLVSLLHLNCSGLQNFEALMALTNLAGISERLRQKILKEKAVPMIEGYMF
EEHEMIRRAATECMCNLAMSKEVQDLFEAQGNDRLKLLVLYSGEDDELLQRAAAGGLAMLTSMRPTLCSR
IPQVTTHWLEILQALLLSSNQELQHRGAVVVLNMVEASREIASTLMESEMMEILSVLAKGDHSPVTRAAA
ACLDKAVEYGLIQPNQDGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH