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Report for CCDS41972.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41972.1 Public Homo sapiens 14 ZC2HC1C 24 110 108 CCDS HistoryNCBI Gene:79696Re-query CCDS DB by CCDS ID:41972.1Re-query CCDS DB by GeneID:79696See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41972.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000524913.3 ENSP00000435550.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000524913.3Link to Ensembl Protein Viewer:ENSP00000435550.1Re-query CCDS DB by Nucleotide ID:ENST00000524913Re-query CCDS DB by Protein ID:ENSP00000435550
Original member Current member EBI ENST00000674086.1 ENSP00000501056.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674086.1Link to Ensembl Protein Viewer:ENSP00000501056.1Re-query CCDS DB by Nucleotide ID:ENST00000674086Re-query CCDS DB by Protein ID:ENSP00000501056
Original member Current member NCBI NM_024643.4 NP_078919.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024643.4Link to Protein Sequence:NP_078919.2Re-query CCDS DB by Nucleotide ID:NM_024643Re-query CCDS DB by Protein ID:NP_078919Link to BLAST:NP_078919.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078919.2 456 Q53FD0-1 456 100% 0 0

Chromosomal Locations for CCDS 41972.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 75070574 75071911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75077532 75077564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1371 nt):
ATGGCTGGTCTCCAGCGGTTGGCGTCACATCTGCCTGTGGGCGTTATGCTCCCACATAATACAACGGAAG
CTCCAGGGCCCCACTCAGCCAAGCAAGACTCTTACGAACAAGGTGACTCTTCCCAGCAGTCCTTGAAGGG
GCACCTGAGGAACAATTTCCAGAAGCAGCTTTTGAGCAACAAAGAGTTGATTCTGGATAAAGTCTATACT
CACCCCAAATGGAACACCCAAACAAAAGCCCGGAGCTACTCCTATCCCCACTGTACTGGAATCAGCCAGC
AAGATCCAGAAAGTGATTCCCAGGGCCAAGGAAATGGTTTGTTTTACTCGTCAGGCCCTCAATCCTGGTA
TCCCAAAGCCAATAACCAGGACTTTATCCCCTTTACAAAGAAACGAGTTGGAGTGGACCGGGCGTTCCCA
TTGAAACCCATGGTCCACAGGAAGTCGTGCAGTACAGGTGAGGCTGGCACTGATGGGGACCATAATGTCT
ACCCAAGGCCCCCTGAGCCGAGAGAGTTTTCATCTAGGAACTTTGGTGTGAGGAACCAGGGCAACTTTTC
TGTGGTTGGTACTGTTCTTGCTGCCACGCAGGCGGAGAAGGCCGTGGCAAACTTTGACAGGACGGAGTGG
GTGCAGATCCGAAGACTAGAAGCTGCAGGGGAGAGCTTAGAGGAGGAAATCCGAAGAAAGCAGATTCTCC
TGAGGGGAAAGCTGAAGAAGACAGAGGAGGAACTCAGAAGGATCCAGACGCAAAAGGAACAGGCCAAGGA
AAATGAAAACGGAGAGCTACAGAAAATTATACTCCCCAGGAGCAGAGTTAAAGGTAATAAAAGCAACACC
ATGTACAAACCTATCTTCTCCCCAGAATTTGAGTTTGAGGAAGAATTTAGTAGAGACAGGAGAGAGGATG
AAACTTGGGGACGGTCTCAACAAAATTCAGGTCCATTCCAGTTCTCTGATTATAGAATCCAGAGGCTCAA
AAGGGAAAGGCTGGTAGCAAGCAATAATAAAATTCGAGACCCAGTCTCAGAGCCATCGGTGGAGAAATTC
TCCCCGCCTTCAGAAACACCAGTCGGTGCTTTGCAGGGATCCGCCAGAAATTCCAGCCTGTCCATGGCAC
CAGACTCCTCAGGTTCCAGCGGCTCCATTGAAGAGCCACAGCTGGGTGAGTGCAGCCACTGTGGGCGCAA
ATTCCTCTCGTTCAGGCTGGAGAGACACTCCAACATCTGCAGCAGGATGCGGGGTTCCAAGAGGAAAGTG
TTTGACTCCTCCAGGGCCCGGGCTAAGGGCACAGAACTAGAGCAGTACTTGAACTGGAAGGGGCCAGCTT
CAGCCAAGGCTGAACCTCCTCAGAAGAGCAACTGGAGATAG

Translation (456 aa):
MAGLQRLASHLPVGVMLPHNTTEAPGPHSAKQDSYEQGDSSQQSLKGHLRNNFQKQLLSNKELILDKVYT
HPKWNTQTKARSYSYPHCTGISQQDPESDSQGQGNGLFYSSGPQSWYPKANNQDFIPFTKKRVGVDRAFP
LKPMVHRKSCSTGEAGTDGDHNVYPRPPEPREFSSRNFGVRNQGNFSVVGTVLAATQAEKAVANFDRTEW
VQIRRLEAAGESLEEEIRRKQILLRGKLKKTEEELRRIQTQKEQAKENENGELQKIILPRSRVKGNKSNT
MYKPIFSPEFEFEEEFSRDRREDETWGRSQQNSGPFQFSDYRIQRLKRERLVASNNKIRDPVSEPSVEKF
SPPSETPVGALQGSARNSSLSMAPDSSGSSGSIEEPQLGECSHCGRKFLSFRLERHSNICSRMRGSKRKV
FDSSRARAKGTELEQYLNWKGPASAKAEPPQKSNWR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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