NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS41926.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41926.1 Public Homo sapiens 14 NGDN 24 110 108 CCDS HistoryNCBI Gene:25983Re-query CCDS DB by CCDS ID:41926.1Re-query CCDS DB by GeneID:25983See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41926.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000408901.8 ENSP00000386134.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000408901.8Link to Ensembl Protein Viewer:ENSP00000386134.3Re-query CCDS DB by Nucleotide ID:ENST00000408901Re-query CCDS DB by Protein ID:ENSP00000386134
Original member Current member NCBI NM_001042635.2 NP_001036100.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001042635.2Link to Protein Sequence:NP_001036100.1Re-query CCDS DB by Nucleotide ID:NM_001042635Re-query CCDS DB by Protein ID:NP_001036100Link to BLAST:NP_001036100.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036100.1 315 Q8NEJ9-1 315 100% 0 0

Chromosomal Locations for CCDS 41926.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 23469716 23469727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23470042 23470101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23470906 23470977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23475171 23475308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23475558 23475642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23475726 23475778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23476029 23476152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23476239 23476407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23477200 23477356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23477503 23477560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23478007 23478026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGGCGGCGCTGGGGGTGCTGGAGTCCGACCTGCCAAGTGCCGTGACACTTCTGAAAAATCTCCAGGAGC
AAGTGATGGCTGTAACTGCACAAGTGAAATCACTGACACAAAAAGTTCAAGCTGGTGCCTATCCTACAGA
AAAGGGTCTCAGCTTCTTGGAAGTGAAAGACCAGCTGCTGCTCATGTACCTTATGGATTTGACCCACCTC
ATTCTGGACAAAGCCTCAGGAGGATCTCTTCAGGGACATGATGCAGTTTTGAGACTGGTGGAGATTCGCA
CGGTTTTGGAAAAGCTTCGTCCCTTGGACCAAAAGCTGAAGTATCAAATTGACAAGCTGATCAAGACTGC
AGTGACAGGCAGCCTTAGTGAGAATGACCCACTTCGTTTTAAGCCTCATCCCAGCAATATGATGAGCAAG
TTGAGCTCTGAGGATGAGGAGGAAGATGAAGCAGAAGATGACCAGTCTGAGGCTTCAGGGAAGAAATCTG
TGAAGGGAGTGTCTAAGAAATATGTTCCTCCACGCTTGGTTCCAGTACATTATGATGAAACAGAAGCTGA
GCGGGAGAAGAAGCGTCTAGAACGAGCCAAGAGACGGGCATTGAGCAGCTCTGTCATTCGTGAACTTAAG
GAGCAGTACTCAGATGCTCCAGAGGAAATCCGTGATGCTCGGCATCCCCATGTTACCCGCCAGAGTCAGG
AGGACCAACACAGGATTAACTATGAGGAGAGCATGATGGTGCGTTTGAGCGTCAGTAAGCGAGAGAAAGG
ACGGCGAAAACGAGCAAATGTCATGAGCTCACAACTTCATTCCCTTACACACTTCAGTGACATCAGTGCT
TTGACAGGGGGAACTGTTCATCTTGATGAGGATCAGAATCCTATTAAGAAGCGGAAGAAGATACCTCAGA
AAGGTCGGAAGAAAAAAGGTTTTCGGAGGCGGCGGTGA

Translation (315 aa):
MAALGVLESDLPSAVTLLKNLQEQVMAVTAQVKSLTQKVQAGAYPTEKGLSFLEVKDQLLLMYLMDLTHL
ILDKASGGSLQGHDAVLRLVEIRTVLEKLRPLDQKLKYQIDKLIKTAVTGSLSENDPLRFKPHPSNMMSK
LSSEDEEEDEAEDDQSEASGKKSVKGVSKKYVPPRLVPVHYDETEAEREKKRLERAKRRALSSSVIRELK
EQYSDAPEEIRDARHPHVTRQSQEDQHRINYEESMMVRLSVSKREKGRRKRANVMSSQLHSLTHFSDISA
LTGGTVHLDEDQNPIKKRKKIPQKGRKKKGFRRRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH