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Report for CCDS41802.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41802.1 Public Homo sapiens 12 ATP23 24 110 108 CCDS HistoryNCBI Gene:91419Re-query CCDS DB by CCDS ID:41802.1Re-query CCDS DB by GeneID:91419See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41802.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300145.4 ENSP00000300145.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300145.4Link to Ensembl Protein Viewer:ENSP00000300145.3Re-query CCDS DB by Nucleotide ID:ENST00000300145Re-query CCDS DB by Protein ID:ENSP00000300145
Original member Current member NCBI NM_033276.4 NP_150592.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033276.4Link to Protein Sequence:NP_150592.1Re-query CCDS DB by Nucleotide ID:NM_033276Re-query CCDS DB by Protein ID:NP_150592Link to BLAST:NP_150592.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_150592.1 246 Q9Y6H3 246 100% 0 0

Chromosomal Locations for CCDS 41802.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 57941702 57941888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57945628 57945673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57946995 57947076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57951758 57951895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57953606 57953689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57956687 57956890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (741 nt):
ATGGCGGGAGCTCCGGACGAGCGCCGGCGGGGCCCCGCGGCAGGGGAGCAGCTGCAGCAGCAACACGTCT
CTTGCCAGGTCTTCCCCGAGCGTCTGGCCCAGGGGAATCCCCAGCAAGGGTTCTTCTCCAGCTTCTTCAC
CAGCAACCAGAAGTGCCAGCTTAGGCTCCTGAAGACGCTGGAGACAAATCCATATGTCAAACTTCTGCTT
GATGCTATGAAACACTCAGGTTGTGCTGTTAACAAAGATAGACACTTTTCTTGCGAAGACTGTAATGGAA
ATGTCAGTGGAGGTTTTGATGCTTCAACATCTCAGATAGTTTTGTGCCAGAATAATATCCATAATCAGGC
CCATATGAACAGAGTGGTCACACACGAGCTTATTCATGCATTTGATCATTGTCGTGCCCATGTCGACTGG
TTCACCAACATCAGACATTTGGCGTGCTCAGAGGTTCGAGCTGCTAACCTTAGTGGAGACTGCTCACTTG
TCAATGAAATATTCAGGTTACATTTTGGATTAAAACAACACCACCAGACTTGTGTGCGAGACAGAGCCAC
TCTTTCTATCCTGGCTGTTAGGAATATCAGCAAAGAAGTAGCTAAAAAGGCTGTTGATGAAGTTTTTGAA
TCTTGTTTCAATGACCATGAACCTTTTGGAAGGATCCCACATAACAAGACTTATGCAAGATATGCTCACA
GAGACTTTGAAAACCGTGATCGGTATTATTCAAATATATGA

Translation (246 aa):
MAGAPDERRRGPAAGEQLQQQHVSCQVFPERLAQGNPQQGFFSSFFTSNQKCQLRLLKTLETNPYVKLLL
DAMKHSGCAVNKDRHFSCEDCNGNVSGGFDASTSQIVLCQNNIHNQAHMNRVVTHELIHAFDHCRAHVDW
FTNIRHLACSEVRAANLSGDCSLVNEIFRLHFGLKQHHQTCVRDRATLSILAVRNISKEVAKKAVDEVFE
SCFNDHEPFGRIPHNKTYARYAHRDFENRDRYYSNI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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