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Report for CCDS41796.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41796.1 Public Homo sapiens 12 COQ10A 24 110 108 CCDS HistoryNCBI Gene:93058Re-query CCDS DB by CCDS ID:41796.1Re-query CCDS DB by GeneID:93058See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41796.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308197.10 ENSP00000312587.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308197.10Link to Ensembl Protein Viewer:ENSP00000312587.5Re-query CCDS DB by Nucleotide ID:ENST00000308197Re-query CCDS DB by Protein ID:ENSP00000312587
Original member Current member NCBI NM_144576.4 NP_653177.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144576.4Link to Protein Sequence:NP_653177.3Re-query CCDS DB by Nucleotide ID:NM_144576Re-query CCDS DB by Protein ID:NP_653177Link to BLAST:NP_653177.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653177.3 247 Q96MF6-1 247 100% 0 0

Chromosomal Locations for CCDS 41796.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 56267119 56267252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56267794 56267940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56269059 56269251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56269460 56269561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56270150 56270317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGGCCTGGGCGGGCTCGCGGCGGGTCCCAGCTGGGACGCGCGCGGCAGCCGAGCGCTGCTGCCGGCTCT
CGCTCAGCCCGGGCGCGCAACCGGCCCCGCCCCCAGGCCCTCTGCCACCGCCGCGACCAATGAGGTTTCT
GACCTCCTGCAGCCTCCTCTTGCCTCGGGCTGCCCAGATCTTGGCGGCTGAGGCTGGCTTACCTTCGAGC
CGTTCCTTCATGGGATTTGCTGCTCCCTTCACCAACAAGCGAAAGGCTTACTCGGAGCGTAGAATCATGG
GGTACTCAATGCAGGAGATGTATGAGGTGGTGTCCAACGTCCAGGAGTATCGTGAGTTTGTGCCCTGGTG
TAAGAAGTCTCTGGTGGTATCCAGCCGTAAGGGTCATTTGAAAGCCCAGCTGGAGGTTGGCTTTCCACCT
GTCATGGAACGTTACACCTCTGCAGTTTCCATGGTCAAACCTCACATGGTCAAGGCTGTTTGTACTGATG
GCAAGCTCTTCAACCACTTAGAGACTATTTGGCGATTCAGCCCTGGTATTCCTGCCTATCCTCGAACCTG
CACTGTGGACTTTTCGATTTCCTTTGAATTTCGTTCTCTGCTGCACTCCCAGCTGGCCACCATGTTTTTT
GATGAGGTTGTCAAACAGAATGTTGCTGCCTTTGAGCGTCGGGCAGCCACCAAGTTTGGTCCAGAAACAG
CCATCCCCCGTGAACTGATGTTCCATGAGGTGCACCAGACTTGA

Translation (247 aa):
MAWAGSRRVPAGTRAAAERCCRLSLSPGAQPAPPPGPLPPPRPMRFLTSCSLLLPRAAQILAAEAGLPSS
RSFMGFAAPFTNKRKAYSERRIMGYSMQEMYEVVSNVQEYREFVPWCKKSLVVSSRKGHLKAQLEVGFPP
VMERYTSAVSMVKPHMVKAVCTDGKLFNHLETIWRFSPGIPAYPRTCTVDFSISFEFRSLLHSQLATMFF
DEVVKQNVAAFERRAATKFGPETAIPRELMFHEVHQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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