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Report for CCDS41651.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41651.1 Public Homo sapiens 11 MS4A3 24 110 108 CCDS HistoryNCBI Gene:932Re-query CCDS DB by CCDS ID:41651.1Re-query CCDS DB by GeneID:932See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41651.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395032.6 ENSP00000378473.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395032.6Link to Ensembl Protein Viewer:ENSP00000378473.2Re-query CCDS DB by Nucleotide ID:ENST00000395032Re-query CCDS DB by Protein ID:ENSP00000378473
Original member Current member NCBI NM_001031666.2 NP_001026836.1 Accepted alive Link to Nucleotide Sequence:NM_001031666.2Link to Protein Sequence:NP_001026836.1Re-query CCDS DB by Nucleotide ID:NM_001031666Re-query CCDS DB by Protein ID:NP_001026836Link to BLAST:NP_001026836.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026836.1 91 Q96HJ5-3 91 100% 0 0

Chromosomal Locations for CCDS 41651.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 60066969 60067112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60069574 60069675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60070204 60070233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (276 nt):
ATGAACATTGCCAGTGCTACAATTGCACTAGTGGGGACTGCTTTTCTCTCACTAAATATAGCAGTTAATA
TCCAGTCATTAAGGAGTTGTCACTCTTCATCAGAGTCACCGGACCTATGCAATTACATGGGCTCCATATC
AAATGGCATGGTGTCTCTACTGCTGATTCTCACCTTGCTGGAATTATGCGTAACCATCTCTACCATAGCC
ATGTGGTGCAATGCAAACTGCTGTAATTCAAGAGAGGAAATTTCCTCACCTCCCAATTCTGTGTAA

Translation (91 aa):
MNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSESPDLCNYMGSISNGMVSLLLILTLLELCVTISTIA
MWCNANCCNSREEISSPPNSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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