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Report for CCDS41315.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41315.1 Public Homo sapiens 1 ATP6V0B 24 110 108 CCDS HistoryNCBI Gene:533Re-query CCDS DB by CCDS ID:41315.1Re-query CCDS DB by GeneID:533See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41315.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000236067.8 ENSP00000236067.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000236067.8Link to Ensembl Protein Viewer:ENSP00000236067.4Re-query CCDS DB by Nucleotide ID:ENST00000236067Re-query CCDS DB by Protein ID:ENSP00000236067
Original member Current member EBI ENST00000498664.1 ENSP00000434094.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000498664.1Link to Ensembl Protein Viewer:ENSP00000434094.1Re-query CCDS DB by Nucleotide ID:ENST00000498664Re-query CCDS DB by Protein ID:ENSP00000434094
Original member Current member NCBI NM_001039457.3 NP_001034546.1 Accepted alive Link to Nucleotide Sequence:NM_001039457.3Link to Protein Sequence:NP_001034546.1Re-query CCDS DB by Nucleotide ID:NM_001039457Re-query CCDS DB by Protein ID:NP_001034546Link to BLAST:NP_001034546.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034546.1 158 Q99437-2 158 100% 0 0

Chromosomal Locations for CCDS 41315.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 43976115 43976173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43976302 43976379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43976590 43976659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43976773 43976824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43977026 43977216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43977981 43978007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (477 nt):
ATGTGGTCCAACCTGGGCATTGGCCTAGCTATCTCCCTGTCTGTGGTTGGGGCAGCCTGGGGCATCTATA
TTACCGGCTCCTCCATCATTGGTGGAGGAGTGAAGGCCCCCAGGATCAAGACCAAGAACCTGGTCAGCAT
CATCTTCTGTGAGGCTGTGGCCATCTACGGCATCATCATGGCAATTGTCATTAGCAACATGGCTGAGCCT
TTCAGTGCCACAGACCCCAAGGCCATCGGCCATCGGAACTACCATGCAGGCTACTCCATGTTTGGGGCTG
GCCTCACCGTAGGCCTGTCTAACCTCTTCTGTGGAGTCTGCGTGGGCATCGTGGGCAGTGGGGCTGCCCT
GGCCGATGCTCAGAACCCCAGCCTCTTTGTAAAGATTCTCATCGTGGAGATCTTTGGCAGCGCCATTGGC
CTCTTTGGGGTCATCGTCGCAATTCTTCAGACCTCCAGAGTGAAGATGGGTGACTAG

Translation (158 aa):
MWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEP
FSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIG
LFGVIVAILQTSRVKMGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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