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Report for CCDS41214.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41214.1 Public Mus musculus X Amelx 23 108 98 CCDS HistoryNCBI Gene:11704Re-query CCDS DB by CCDS ID:41214.1Re-query CCDS DB by GeneID:11704See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41214.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112118.7 ENSMUSP00000107746.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112118.7Link to Ensembl Protein Viewer:ENSMUSP00000107746.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112118Re-query CCDS DB by Protein ID:ENSMUSP00000107746
Original member Current member NCBI NM_009666.4 NP_033796.1 Accepted alive Link to Nucleotide Sequence:NM_009666.4Link to Protein Sequence:NP_033796.1Re-query CCDS DB by Nucleotide ID:NM_009666Re-query CCDS DB by Protein ID:NP_033796Link to BLAST:NP_033796.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033796.1 196 P63277-1 196 100% 0 0

Chromosomal Locations for CCDS 41214.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 169180171 169180176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 169181778 169182215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 169182485 169182529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 169183900 169183947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 169185811 169185864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (591 nt):
ATGGGGACCTGGATTTTGTTTGCCTGCCTCCTGGGAGCAGCTTTTGCTATGCCCCTACCACCTCATCCTG
GAAGCCCTGGTTATATCAACTTAAGCTATGAGGTGCTTACCCCTTTGAAGTGGTACCAGAGCATGATAAG
GCAGCCGTATCCTTCCTATGGTTACGAACCCATGGGTGGATGGCTGCACCACCAAATCATCCCTGTGCTG
TCTCAACAGCATCCCCCGAGTCACACCCTTCAGCCTCATCACCACCTTCCCGTGGTGCCAGCTCAACAGC
CCGTGGCCCCCCAGCAACCAATGATGCCAGTTCCTGGCCACCACTCCATGACTCCAACCCAACACCATCA
GCCAAACATCCCTCCATCCGCCCAGCAGCCCTTCCAGCAGCCCTTCCAGCCCCAGGCCATTCCACCCCAG
TCTCATCAGCCCATGCAGCCCCAGTCACCTCTGCATCCCATGCAGCCCCTGGCACCACAGCCACCTCTGC
CTCCACTGTTCTCCATGCAGCCCCTGTCCCCCATTCTTCCTGAGCTGCCTCTGGAAGCTTGGCCAGCGAC
AGACAAGACCAAGCGGGAAGAAGTGGATTAA

Translation (196 aa):
MGTWILFACLLGAAFAMPLPPHPGSPGYINLSYEVLTPLKWYQSMIRQPYPSYGYEPMGGWLHHQIIPVL
SQQHPPSHTLQPHHHLPVVPAQQPVAPQQPMMPVPGHHSMTPTQHHQPNIPPSAQQPFQQPFQPQAIPPQ
SHQPMQPQSPLHPMQPLAPQPPLPPLFSMQPLSPILPELPLEAWPATDKTKREEVD


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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