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Report for CCDS41205.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41205.1 Public Mus musculus X Zrsr2 23 108 98 CCDS HistoryNCBI Gene:22184Re-query CCDS DB by CCDS ID:41205.1Re-query CCDS DB by GeneID:22184See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41205.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000090840.9 ENSMUSP00000088350.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000090840.9Link to Ensembl Protein Viewer:ENSMUSP00000088350.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000090840Re-query CCDS DB by Protein ID:ENSMUSP00000088350
Original member Current member NCBI NM_178794.4 NP_848909.2 Accepted alive Link to Nucleotide Sequence:NM_178794.4Link to Protein Sequence:NP_848909.2Re-query CCDS DB by Nucleotide ID:NM_178794Re-query CCDS DB by Protein ID:NP_848909Link to BLAST:NP_848909.2

Chromosomal Locations for CCDS 41205.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 163953546 163953656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 163954374 163954482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 163956472 163956553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 163957916 163957995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 163958274 163958326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (435 nt):
ATGGAAACGGCGGGGGCTACGGCGGACGCTACGGCGGGGCCGCAGAAACTGAGCCGTAAGAAGTACTTGG
CCCTCCGGAAGAAGGAGAGACGTAAGAGGCGACGGCAGGCGCTCGCTCGGCTCAGAGAGGCAGAATTGGC
ACAGAAAGAGGAGGAAGAAGATCCTCTTGCTGAAGAAAAACGACTAGAAGAAGAAAGGTTGTTAGAGGAA
GAGAGGCAGAGACTGCATGAAGAATGGTTACTGAGGGAAGAAAAGGCACAAGAAGAATTCAGGGCAAAGA
AGAAAAAAGAAGAGGAAGCTCGAAAACGGAAGGAAGAACTAGAGAGAAAGTTAAAGGCAGAATGGGAAGA
ACAGCAGAGAAAAGAGCGAGAGGAAGAGGAGCAGAAACGACAAGAGAAGAGAGAAAGAGAGGTGACTTCT
GTCATAGGAGGATAG

Translation (144 aa):
METAGATADATAGPQKLSRKKYLALRKKERRKRRRQALARLREAELAQKEEEEDPLAEEKRLEEERLLEE
ERQRLHEEWLLREEKAQEEFRAKKKKEEEARKRKEELERKLKAEWEEQQRKEREEEEQKRQEKREREVTS
VIGG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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