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Report for CCDS41019.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41019.1 Public Mus musculus X Rpl10 23 108 98 CCDS HistoryNCBI Gene:110954Re-query CCDS DB by CCDS ID:41019.1Re-query CCDS DB by GeneID:110954See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41019.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000008826.13 ENSMUSP00000008826.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000008826.13Link to Ensembl Protein Viewer:ENSMUSP00000008826.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000008826Re-query CCDS DB by Protein ID:ENSMUSP00000008826
Original member Current member EBI ENSMUST00000074085.11 ENSMUSP00000082055.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074085.11Link to Ensembl Protein Viewer:ENSMUSP00000082055.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000074085Re-query CCDS DB by Protein ID:ENSMUSP00000082055
Original member NCBI NM_052835.3 NP_443067.1 Updated not alive Link to Nucleotide Sequence:NM_052835.3Link to Protein Sequence:NP_443067.1Re-query CCDS DB by Nucleotide ID:NM_052835Re-query CCDS DB by Protein ID:NP_443067
Current member NCBI NM_052835.4 NP_443067.1 Accepted alive Link to Nucleotide Sequence:NM_052835.4Link to Protein Sequence:NP_443067.1Re-query CCDS DB by Nucleotide ID:NM_052835Re-query CCDS DB by Protein ID:NP_443067Link to BLAST:NP_443067.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443067.1 214 Q6ZWV3 214 100% 0 0

Chromosomal Locations for CCDS 41019.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 74271002 74271024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74271660 74271718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74271800 74271907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74272179 74272317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74272672 74272834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74272915 74273067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (645 nt):
ATGGGCCGCCGCCCCGCCCGGTGTTACCGGTATTGTAAGAACAAGCCATACCCAAAGTCTCGTTTCTGCC
GTGGTGTCCCTGATGCTAAGATCCGAATCTTTGATTTGGGACGGAAGAAAGCAAAAGTTGATGAATTCCC
ACTTTGTGGCCATATGGTGTCAGATGAATATGAGCAACTCTCTTCTGAAGCACTGGAGGCTGCCCGTATT
TGTGCCAACAAATACATGGTAAAGAGTTGTGGCAAGGATGGCTTTCATATCCGAGTGAGGCTCCACCCTT
TCCATGTCATCCGTATCAACAAGATGTTGTCCTGTGCTGGGGCTGACAGGCTCCAGACAGGGATGCGTGG
TGCCTTTGGGAAGCCCCAGGGCACAGTGGCCAGGGTTCACATTGGCCAGGTCATCATGTCCATCCGAACC
AAGTTGCAGAACAAGGAACATGTGATTGAGGCTCTGCGAAGAGCCAAGTTCAAGTTCCCTGGCCGCCAGA
AGATCCACATCTCAAAGAAGTGGGGCTTCACCAAGTTTAATGCAGATGAATTTGAAGACATGGTTGCTGA
GAAGCGGCTCATTCCTGATGGCTGTGGTGTCAAATATATCCCCAATCGTGGTCCTCTGGACAAGTGGAGA
GCCCTGCATTCCTGA

Translation (214 aa):
MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARI
CANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRT
KLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPLDKWR
ALHS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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