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Report for CCDS40209.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40209.1 Public Mus musculus 8 Map2k7 23 108 98 CCDS HistoryNCBI Gene:26400Re-query CCDS DB by CCDS ID:40209.1Re-query CCDS DB by GeneID:26400See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40209.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000110998.8 ENSMUSP00000106626.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110998.8Link to Ensembl Protein Viewer:ENSMUSP00000106626.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000110998Re-query CCDS DB by Protein ID:ENSMUSP00000106626
Original member Current member NCBI NM_011944.3 NP_036074.2 Accepted alive Link to Nucleotide Sequence:NM_011944.3Link to Protein Sequence:NP_036074.2Re-query CCDS DB by Nucleotide ID:NM_011944Re-query CCDS DB by Protein ID:NP_036074Link to BLAST:NP_036074.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036074.2 419 Q8CE90-2 419 100% 0 0

Chromosomal Locations for CCDS 40209.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 4238910 4239033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4243304 4243445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4243553 4243619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4243743 4243856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4243951 4244070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4244229 4244336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4244427 4244606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4244695 4244775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4244861 4245003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4245543 4245588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4245695 4245829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1260 nt):
ATGGCGGCGTCCTCCCTGGAGCAGAAGCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGAACCGTGAGG
CC
CGCAGGAGGATCGACCTCAACTTGGATATCAGCCCACAGCGGCCCAGGCCCACCCTGCAACTCCCACT
G
GCCAACGATGGGGGCAGCCGCTCACCATCCTCAGAGAGCTCCCCACAGCACCCTACACCCCCCACCCGG
CCC
CGCCACATGCTGGGGCTCCCATCAACCTTGTTCACACCGCGCAGTATGGAGAGCATCGAGATTGACC
AG
AAGCTGCAGGAGATCATGAAGCAGACAGGGTACCTGACTATCGGGGGCCAGCGTTATCAGGCAGAAAT
C
AATGACTTGGAGAACTTGGGTGAGATGGGCAGTGGTACCTGTGGTCAGGTGTGGAAGATGCGGTTCCGG
AAG
ACAGGCCACATCATTGCTGTTAAGCAAATGCGGCGCTCTGGGAACAAGGAAGAGAATAAGCGCATTT
TG
ATGGACCTGGATGTAGTACTCAAGAGCCATGACTGCCCTTACATCGTTCAGTGCTTTGGCACCTTCAT
C
ACCAACACAGACGTCTTTATTGCCATGGAGCTCATGGGCACATGTGCAGAGAAGCTGAAGAAACGAATG
CAG
GGCCCCATTCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGATTGTGAAAGCACTGTACTATCTGA
AG
GAGAAGCATGGCGTCATCCATCGCGATGTCAAACCCTCCAACATCCTGCTAGATGAGCGGGGCCAGAT
C
AAGCTCTGTGACTTTGGCATCAGTGGCCGCCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTGGCTGT
GCT
GCCTATATGGCTCCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCTGACTATGACATCCGAGCTG
AT
GTGTGGAGCCTGGGCATCTCACTGGTGGAGCTGGCAACAGGACAGTTCCCCTATAAGAACTGCAAGAC
G
GACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGAGCCCCCACTCCTGCCTGGTCACATGGGCTTCTCA
GGG
GACTTCCAGTCATTTGTCAAAGACTGCCTTACTAAAGATCACAGGAAGAGACCAAAGTATAATAAGC
TA
CTTGAACACAGCTTCATCAAGCACTATGAGATACTCGAGGTGGATGTCGCGTCCTGGTTTAAGGATGT
C
ATGGCGAAGACCGAGTCCCCAAGGACTAGTGGAGTCCTGAGTCAGCACCATCTGCCCTTCTTCAGGTAG


Translation (419 aa):
MAASSLEQKLSRLEAKLKQENREARRRIDLNLDISPQRPRPTLQLPLANDGGSRSPSSESSPQHPTPPTR
P
RHMLGLPSTLFTPRSME
SIEIDQKLQEIMKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFR
K
TGHIIAVK
QMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRM
Q
GPIPERILGKMTVA
IVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDSKAKTRSAGC
A
AYMA
PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFS
G
DFQSFVKD
CLTKDHRKRPKYNKLLEHSFIKHYEILEVDVASWFKDVMAKTESPRTSGVLSQHHLPFFR



Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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