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Report for CCDS39737.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39737.1 Public Mus musculus 7 Ppp6r1 23 108 98 CCDS HistoryNCBI Gene:243819Re-query CCDS DB by CCDS ID:39737.1Re-query CCDS DB by GeneID:243819See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 39737.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064099.7 ENSMUSP00000066736.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064099.7Link to Ensembl Protein Viewer:ENSMUSP00000066736.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000064099Re-query CCDS DB by Protein ID:ENSMUSP00000066736
Original member Current member NCBI NM_172894.2 NP_766482.2 Accepted alive Link to Nucleotide Sequence:NM_172894.2Link to Protein Sequence:NP_766482.2Re-query CCDS DB by Nucleotide ID:NM_172894Re-query CCDS DB by Protein ID:NP_766482Link to BLAST:NP_766482.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766482.2 856 Q7TSI3 856 100% 0 0

Chromosomal Locations for CCDS 39737.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 4632241 4632244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4632341 4632397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4632489 4632599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4633059 4633140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4633273 4633343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4633469 4633601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4633694 4633824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4635965 4636137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4636216 4636273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4639514 4639611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4639691 4639780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4639893 4639978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4640073 4640188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4640309 4640373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4641046 4641180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4641265 4641417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4641505 4641667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4641928 4642041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4642136 4642248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4643001 4643066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4643149 4643286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4643369 4643555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4646708 4646934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2571 nt):
ATGTTTTGGAAGTTTGATCTGCACACAAGCTCTCACCTGGACACACTGCTGGAGAAGGAGGACCTGAGCC
TGCCTGAGCTGCTGGATGAGGAGGATGTGCTGCAGGAGTGCAAGGTGGTCAATCGGAAGCTCCTAGACTT
CCTGCTACAGCCGTCCCACCTGCAGGCCATGGTGGCCTGGGTTACCCAGGAGCCCCCAGCCAGTGGGGAG
GAGCGGCTACGCTACAAGTACCCTAGTGTAGCCTGTGAAATCCTGACCTCTGATGTGCCCCAGATCAACG
ATGCCCTGGGTGCAGATGAGTCCCTCCTGAACCGACTCTATGGCTTCCTGCAGAGTGGTGACAGCCTCAA
CCCGCTGCTTGCTAGCTTTTTCAGCAAAGTCATGGGCATTCTTATCAATCGCAAGACAGACCAGCTTGTG
TCCTTCCTGCGCAAGAAAGATGACTTTGTGGACCTGTTGCTGCGGCACATTGGTACCTCAGCCATCATGG
ATCTCCTGTTGCGTCTGCTGACTTGTGTGGAGCGGCCTCAGCTGCGGCAGGATGTCTTCAATTGGCTCAA
CGAAGAGAAGATTGTCCAGCGGCTAATTGAGCAGATTCACCCATCAAAGGATGACAATCAACATTCCAAT
GCATCTCAGTCCCTGTGTGACATCATCCGCCTAAGCCGCGAGCAGATGATCCAAGGCCAGGACAGCCCGG
AGCCAGACCAGCTGTTGGCCACCTTGGAGAAGCAGGAGACCATCGAGCAGCTCCTCAGTAACATGTTTGA
GGGAGAGCAGTGCCAGTCTGTCATTGTCAGTGGGATCCAGGTGTTGCTCACCCTCCTGGAACCTAGGAGG
CCAAGGTCTGACTCTGTGACCATGAACAACTTCTTTAGCAGTGTGGATGGGCAGTTGGAGCTCCTGGCTC
AGGGAGCCCTGGATGATGCACTGTCTAGTATGGGTGCCTTGCATGCCCTGCGTCCCCGGCTTGATCGCTT
CCATCAGCTCCTGCTTGAGCCTCCCAAGCTGGAGCCTCTGCAGATGACGTGGGGCAGTCTGGCGCCACCA
CTGGGTAACACGAGGTTACACGTGGTCAAGCTCCTGGCCAGTGCCCTGAGTGCCAACGCCGCTGCCTTGA
CGCAGGAGCTTTTGGTGCTGGATGTGCCCAACACCTTACTGGACCTCTTCTTCCACTATGTATTCAACAA
CTTCCTGCATGCTCAAGTGGAAGTGTGTGTGAGCGCAATGCTGAGTTCCGGGCCCCCTCCAGACAGCAGC
TCTGAGACACCTGTCCCAAACCCTATCGTGAAACATCTCCTTCAGCACTGCCGCCTGGTGGAGCGCATTC
TGGCATCCTGGGAGGAGAACGACCGTGTGCAGTCTGGAGGGGGCCCAAGGAAAGGCTACATGGGCCACCT
GACTCGGGTGGCCAATGCTGTGGTGCAGAATGCAGAACAGGGGCCCAATGCTGAACAACTGGGACAACTG
CTAAAGGAGCTGCCAGAGGAGCAGCAGCAGCGATGGGAAGCATTTGTGTCAGGACCCCTGGCCGAGACCA
ACAAGAAGAACACAGTGGATCTGGTAAACACTCACCACCTGCATTCTTCCAGTGATGATGAGGATGACCG
CCTCAAGGAGTTCAACTTCCCTGAGGAGGCTGTATTGCAACAGGCCTTCATGGACTTCCAGATGCAACGC
ATGACCTCAGCCTTCATTGACCACTTTGGCTTTAATGATGAGGAATTTGGGGAGCAGGAAGAAAGTGTGA
ATGCACCATTTGACAAGACTGCCAACATTACCTTCTCCCTAAATGCTGACGATGAAAATCCCAATGCCAA
CCTGCTTGAGATATGCTACAAGGACCGGATCCAGCAGTTTGATGATGAGGAAGAAGAGGAAGAGGAGGGC
CAAGGCTCAGCAGAGTCAGATGGAGAGTATGGTGCCTGGCAGGGCAGCCAGCCAGTGAGAGCGTCCCAGG
CAAGCCAGCCCCCTGGTGTGCGGAGTGGAGGAAGCACAGACAGCGAGGAGGAGGACGAGGAGGAGGACGA
GGAGGAGGATGAGGGGGCTGAGCAGGCAGCCTGTGGAAGAACCAGCCCTTCCTCCTTCCCCAGCCCCAGC
ACTCAGCCTCCTGGCCCAAGTTGGACTGCTACCTTTGACACAGTGCCTATGGATGCCCCAACAGGTCCCC
CAGTTTCTAAGGAGGCAGACATGTCCTCTATCCAGATCCCATCCAGCCCTCCAGCCCACGGTTCCCCACA
GCTCAGGTCTCAGGACCCCACACATCCCTCAGCACCTCAGGAAGTCACAGATAGCAGCAAAGTAGCAGAG
CCCTTGGCCCCCTGCCAGGCCTTGGTTAGTGTTGCGGATGTCCAGGCCACACTGCATGGGATGCGCTCTG
CCCCCAGCTCCTTGGACAGTGCAACCAGAGACCCCTCTACCTCTGTCCCAGACTTCAAGGCCCACCAGTC
TCCTCAGACCATGGAGGGGAAAAGGAGCCCAGAACATTTGGGGCTTCCCCAAAGCCAGAGTGCCCTTGAG
ATGCCCAATGGCTCTACCCCAGGAGGGCCTATTTCATCGGGTTCCCAGTAG

Translation (856 aa):
MFWKFDLHTSSHLDTLLEKEDLSLPELLDEEDVLQECKVVNRKLLDFLLQPSHLQAMVAWVTQEPPASGE
ERLRYKYPSVACEILTSDVPQINDALGADESLLNRLYGFLQSGDSLNPLLASFFSKVMGILINRKTDQLV
SFLRKKDDFVDLLLRHIGTSAIMDLLLRLLTCVERPQLRQDVFNWLNEEKIVQRLIEQIHPSKDDNQHSN
ASQSLCDIIRLSREQMIQGQDSPEPDQLLATLEKQETIEQLLSNMFEGEQCQSVIVSGIQVLLTLLEPRR
PRSDSVTMNNFFSSVDGQLELLAQGALDDALSSMGALHALRPRLDRFHQLLLEPPKLEPLQMTWGSLAPP
LGNTRLHVVKLLASALSANAAALTQELLVLDVPNTLLDLFFHYVFNNFLHAQVEVCVSAMLSSGPPPDSS
SETPVPNPIVKHLLQHCRLVERILASWEENDRVQSGGGPRKGYMGHLTRVANAVVQNAEQGPNAEQLGQL
LKELPEEQQQRWEAFVSGPLAETNKKNTVDLVNTHHLHSSSDDEDDRLKEFNFPEEAVLQQAFMDFQMQR
MTSAFIDHFGFNDEEFGEQEESVNAPFDKTANITFSLNADDENPNANLLEICYKDRIQQFDDEEEEEEEG
QGSAESDGEYGAWQGSQPVRASQASQPPGVRSGGSTDSEEEDEEEDEEEDEGAEQAACGRTSPSSFPSPS
TQPPGPSWTATFDTVPMDAPTGPPVSKEADMSSIQIPSSPPAHGSPQLRSQDPTHPSAPQEVTDSSKVAE
PLAPCQALVSVADVQATLHGMRSAPSSLDSATRDPSTSVPDFKAHQSPQTMEGKRSPEHLGLPQSQSALE
MPNGSTPGGPISSGSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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