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Report for CCDS39282.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39282.1 Public Mus musculus 5 Eif2b1 23 108 98 CCDS HistoryNCBI Gene:209354Re-query CCDS DB by CCDS ID:39282.1Re-query CCDS DB by GeneID:209354See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39282.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031334.14 ENSMUSP00000031334.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031334.14Link to Ensembl Protein Viewer:ENSMUSP00000031334.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000031334Re-query CCDS DB by Protein ID:ENSMUSP00000031334
Original member Current member NCBI NM_145371.4 NP_663346.1 Accepted alive Link to Nucleotide Sequence:NM_145371.4Link to Protein Sequence:NP_663346.1Re-query CCDS DB by Nucleotide ID:NM_145371Re-query CCDS DB by Protein ID:NP_663346Link to BLAST:NP_663346.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663346.1 305 Q99LC8 305 100% 0 0

Chromosomal Locations for CCDS 39282.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 124571190 124571354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124571761 124571886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124573078 124573153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124573686 124573754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124574598 124574710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124576798 124576914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124577016 124577152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124578437 124578538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 124579001 124579013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGGAGGACGGTGAGTTAATTGAATACTTTAAGTCTCAGATGAAAGGAGATCCTAAAATGGCCTCAGCTG
TGGCTGCCATCCAGACTTTGTTGGAATTCTTGAAGAGAGATAAAGGAGAAACACTCCAGGGCCTGAGAGC
AAATCTCACCTATGCCATAAAAACCCTCTGTGGTGTGGACTCCTCAGTGGCCGTGTCATCTGGCGGGGAG
CTCTTCCTTCGCTTCATCAGCCTCACCTCCCTGGAATACTCTGACTACTCCAAATGTAAGAAGATCATGA
TTGAGAGAGGAGAGCTGTTCCTGAGAAGAATATCCCTGTCGAGAAATAAGATTGCCAATCTGTGTCATAC
ATTCATCAAAGACGGGGCGAGAATTTTGACTCACGCCTACTCCAGAGTTGTCTTAAGAGTCCTGGAAGAA
GCCGTGGCAGCCAAGAAACGGTTCAGTGTGTATATCACGGAGTCGCAGCCTGATTTATCTGGTAAGAAAA
TGGCCAAAGCCCTCTCCCACCTCAACGTCCCTGTCACTGTGGTGCTGGATGCTGCTGTCGGCTATATCAT
GGAGAAAGCAGATCTTGTCATAGTTGGTGCTGAAGGAGTGGTAGAGAACGGAGGCATTATTAACAAGATT
GGAACCAACCAGATGGCCGTGTGTGCCAAAGCCCAGAATAAGCCCTTCTATGTGGTTGCAGAAAGCTTCA
AGTTCGTACGCCTCTTTCCACTCAACCAGGAGGACGTCCCAGATAAGTTTAAGTACAAGGCAGACACTCT
GAAGTCTGTGCAGACTGGGCAGGATCTCAAAGAGGAACACCCATGGGTGGACTACACCTCCCCATCCCTC
ATCACCCTGCTGTTTACGGACCTGGGTGTGTTGACGCCATCTGCTGTAAGCGATGAGCTCATCAAGCTGT
ACCTATGA

Translation (305 aa):
MEDGELIEYFKSQMKGDPKMASAVAAIQTLLEFLKRDKGETLQGLRANLTYAIKTLCGVDSSVAVSSGGE
LFLRFISLTSLEYSDYSKCKKIMIERGELFLRRISLSRNKIANLCHTFIKDGARILTHAYSRVVLRVLEE
AVAAKKRFSVYITESQPDLSGKKMAKALSHLNVPVTVVLDAAVGYIMEKADLVIVGAEGVVENGGIINKI
GTNQMAVCAKAQNKPFYVVAESFKFVRLFPLNQEDVPDKFKYKADTLKSVQTGQDLKEEHPWVDYTSPSL
ITLLFTDLGVLTPSAVSDELIKLYL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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