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Report for CCDS3917.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3917.1 Public Homo sapiens 5 NADK2 24 110 108 CCDS HistoryNCBI Gene:133686Re-query CCDS DB by CCDS ID:3917.1Re-query CCDS DB by GeneID:133686See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3917.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000282512.7 ENSP00000282512.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000282512.7Link to Ensembl Protein Viewer:ENSP00000282512.3Re-query CCDS DB by Nucleotide ID:ENST00000282512Re-query CCDS DB by Protein ID:ENSP00000282512
Original member Current member EBI ENST00000397338.5 ENSP00000380499.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397338.5Link to Ensembl Protein Viewer:ENSP00000380499.1Re-query CCDS DB by Nucleotide ID:ENST00000397338Re-query CCDS DB by Protein ID:ENSP00000380499
Original member Current member NCBI NM_001287340.2 NP_001274269.1 Accepted alive Link to Nucleotide Sequence:NM_001287340.2Link to Protein Sequence:NP_001274269.1Re-query CCDS DB by Nucleotide ID:NM_001287340Re-query CCDS DB by Protein ID:NP_001274269Link to BLAST:NP_001274269.1
Original member Current member NCBI NM_153013.5 NP_694558.1 Accepted alive Link to Nucleotide Sequence:NM_153013.5Link to Protein Sequence:NP_694558.1Re-query CCDS DB by Nucleotide ID:NM_153013Re-query CCDS DB by Protein ID:NP_694558Link to BLAST:NP_694558.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001274269.1 279 Q4G0N4-3 279 100% 0 0
NP_694558.1 279 Q4G0N4-3 279 100% 0 0

Chromosomal Locations for CCDS 3917.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 36195144 36195282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36197541 36197664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36200227 36200280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36201106 36201161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36207170 36207265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36211844 36211922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36217748 36217884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36219596 36219679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36225542 36225612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (840 nt):
ATGCTGCTGGCAGCGAGTAAAGTCTTGGACAGACTTAAACCAGTTATAGGGGTAAACACTGATCCAGAAC
GGTCTGAGGGTCATTTATGCCTGCCCGTTCGATATACACATTCCTTTCCAGAAGCCTTACAGAAGTTCTA
TCGTGGTGAGTTCAGGTGGTTGTGGAGGCAGAGAATCAGGTTATACCTTGAAGGGACTGGCATAAACCCT
GTACCTGTGGACCTTCACGAGCAGCAGCTAAGCTTGAATCAGCACAATAGAGCCCTTAACATTGAAAGAG
CTCATGATGAAAGGTCTGAGGCTTCAGGACCCCAACTTCTGCCAGTGAGAGCACTAAATGAAGTCTTCAT
TGGGGAGAGTCTGTCATCCAGGGCTTCCTACTATGAGATTTCAGTTGATGATGGTCCATGGGAAAAACAG
AAGAGTTCAGGGCTCAATTTGTGTACTGGAACAGGATCAAAGGCCTGGTCATTCAATATTAACAGGGTTG
CAACTCAGGCTGTAGAAGATGTTTTAAATATTGCAAAACGACAAGGAAATTTGAGTCTTCCATTGAACAG
AGAATTGGTAGAGAAAGTAACAAATGAATATAATGAATCACTGCTCTACAGTCCGGAAGAACCAAAAATA
CTTTTCAGTATTCGAGAACCAATAGCAAATAGAGTTTTCTCAAGCAGTCGTCAGCGTTGTTTCTCCTCAA
AGGTTTGTGTTCGTTCTCGTTGTTGGGATGCCTGTATGGTTGTGGATGGAGGAACTTCTTTTGAGTTTAA
TGATGGTGCAATTGCTTCGATGATGATCAATAAAGAAGATGAGCTTCGAACTGTGCTTCTTGAACAGTGA

Translation (279 aa):
MLLAASKVLDRLKPVIGVNTDPERSEGHLCLPVRYTHSFPEALQKFYRGEFRWLWRQRIRLYLEGTGINP
VPVDLHEQQLSLNQHNRALNIERAHDERSEASGPQLLPVRALNEVFIGESLSSRASYYEISVDDGPWEKQ
KSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQGNLSLPLNRELVEKVTNEYNESLLYSPEEPKI
LFSIREPIANRVFSSSRQRCFSSKVCVRSRCWDACMVVDGGTSFEFNDGAIASMMINKEDELRTVLLEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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