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Report for CCDS39128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39128.1 Public Mus musculus 5 Ugt2b35 23 108 98 CCDS HistoryNCBI Gene:243085Re-query CCDS DB by CCDS ID:39128.1Re-query CCDS DB by GeneID:243085See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39128.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031186.8 ENSMUSP00000031186.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031186.8Link to Ensembl Protein Viewer:ENSMUSP00000031186.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000031186Re-query CCDS DB by Protein ID:ENSMUSP00000031186
Original member Current member NCBI NM_172881.3 NP_766469.1 Accepted alive Link to Nucleotide Sequence:NM_172881.3Link to Protein Sequence:NP_766469.1Re-query CCDS DB by Nucleotide ID:NM_172881Re-query CCDS DB by Protein ID:NP_766469Link to BLAST:NP_766469.1

Chromosomal Locations for CCDS 39128.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 87000892 87001612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87003258 87003406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87004843 87004974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87007310 87007397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87008141 87008360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87011259 87011538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1590 nt):
ATGCCTGTGAAGTGGATTTCTGCTCTGCTCCTGCTGCAGATGAGTTGCTGCTTCAGATCCACCAGCTGTG
GGAAGGTGTTAGTGTGGCCACTGGAATTCAGTCACTGGATGAATTTAAAGATAATACTGGATGAACTTGT
ACAGAGGGGCCATGAAGTCACTGTTCTGAGACCTTCAGCTTCCATTTTTGTTGATCCCAAATATTCGCCG
GGCCTTAAGTTTGAAACTTTTCCTACAGCTTTCAGTAAAGATTATCTGGAAACTTTTTTGACCAAGTTAG
TGGATGAATGGACTTTTGAGGTCCCAAGAGATACATGCTTATCATATTCTCTGCTTCAAACACTGTTTGG
TAAATTATCTGATTATTCTCTAAGTCTTTGTAAGGAAGCTGTTTCAAACAAACAGCTCATGACAAAATTC
CAGGAATCCAAGTTTGATGTCCTTATTTTAGATGCCATGGCTTCCTGTGGGGAGCTCATAGCTCAACTGC
TCCAGATTCCTTTTCTGTACAGTCTTCGCTTCTCTCCTGGCTACCAAGTTGAAAAGAACAGTGGAGGATT
TGTACTCCCTCCCTCTTATGTACCTGTGATTTTGTCAGGATTAGGTGGCCAAATGACATTCACAGAGAGG
GTCAAAAATATGATATGTATGCTTTATTTTGACTTTTGGTTCCAGACATTTACAGAGAAGGAATGGGATC
AATTTTACAGTGAAACTTTGGGAAGGCCCACCACCTTAATTGAGACAATGGGCAAAGCAGAAATGTGGTT
CATAAGATCCTACTGGGATCTGGAGTTTCCTCACCCAACCTTACCAAATGTTGAATATGTTGGAGGACTC
CATTGCAAACCTGCTAAGCCCTTGCCTAAGGAAATGGAAGACTTTGTTCAGAGCTCTGGAGTCCATGGTG
TGGTGGTGTTTTCTCTAGGGTCGATGGTCAGTAACATGACAGAAGAAAGGGCCAACGCAATTTCTTGGGC
CCTTGCCCAGATTCCACAAAAGGTTCTTTGGCGATTTGATGGCAAAACCCCAGCTTCCTTAGGACCCAAT
ACCAGAATCTACAAGTGGCTCCCCCAGAATGACCTTCTCGGTCATCCAAAAACCAAAGCCTTTGTAACTC
ATGGTGGCGCGAATGGACTCTATGAGGCAATCCATCATGGAATCCCTATGATTGGCATTCCTTTGTTTTC
AGAACAACATGATAACATTGCACACATGGTGGCCAAAGGCACAGCTGTTGCATTAAATATCAGAACAATG
TCAAGGTCAGATTTGCTCAATGCACTGGAAGAAGTAATTAATAATCCTTCTTATAAAGAGAATGTGATGT
GGTTGTCAACCATTCACCATGACCAGCCTATGAAGCCACTGAACAGGACTATATTTTGGATTGAGTTTGT
CATGCGCCACAAAGGAGCCAAGCACCTGAGACCACTTGCACACAACCTCACCTGGTACCAGTACCACTCT
CTGGATGTGATTGGATTCCTACTAGTCTGTGTGGTGGCCACTGCAGTCCTTCCTGTAAAGTGCTGCTTGT
TTGTTTATCAATTCTTTGTAAAGAAGGCAAAGAAAAGGAAGAATGAGTAG

Translation (529 aa):
MPVKWISALLLLQMSCCFRSTSCGKVLVWPLEFSHWMNLKIILDELVQRGHEVTVLRPSASIFVDPKYSP
GLKFETFPTAFSKDYLETFLTKLVDEWTFEVPRDTCLSYSLLQTLFGKLSDYSLSLCKEAVSNKQLMTKF
QESKFDVLILDAMASCGELIAQLLQIPFLYSLRFSPGYQVEKNSGGFVLPPSYVPVILSGLGGQMTFTER
VKNMICMLYFDFWFQTFTEKEWDQFYSETLGRPTTLIETMGKAEMWFIRSYWDLEFPHPTLPNVEYVGGL
HCKPAKPLPKEMEDFVQSSGVHGVVVFSLGSMVSNMTEERANAISWALAQIPQKVLWRFDGKTPASLGPN
TRIYKWLPQNDLLGHPKTKAFVTHGGANGLYEAIHHGIPMIGIPLFSEQHDNIAHMVAKGTAVALNIRTM
SRSDLLNALEEVINNPSYKENVMWLSTIHHDQPMKPLNRTIFWIEFVMRHKGAKHLRPLAHNLTWYQYHS
LDVIGFLLVCVVATAVLPVKCCLFVYQFFVKKAKKRKNE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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