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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS38617.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
38617.1 |
Public |
Mus musculus |
3 |
Abca4 |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 38617.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000013995.12 |
ENSMUSP00000013995.8 |
Accepted |
alive |
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NCBI |
NM_007378.1 |
NP_031404.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_031404.1 |
2310 |
O35600 |
2310 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 38617.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6933 nt): ATGGGCTTCCTCAGACAGATACAGCTTTTGCTTTGGAAGAACTGGACTCTGAGGAAAAGGCAGAAGATTC GCTTTGTAGTGGAACTCGTGTGGCCTTTGTCTTTGTTTTTGGTGTTAATCTGGCTGAGGAATGCCAACCC ACTCTATAGTCAGCATGAATGCCATTTTCCCAACAAGGCGATGCCTTCAGCAGGACTGTTACCGTGGCTC CAGGGGATTTTCTGCAATATGAACAACCCTTGTTTTCAAAACCCCACCCCTGGAGAGTCTCCTGGAACTG TCTCAAACTATAACAACTCCATCTTGGCAAGAGTATATCGAGATTTTCAAGAACTCTTCATGGACACCCC GGAGGTCCAGCACCTTGGCCAGGTTTGGGCCGAGCTCCGCACCTTGTCGCAGTTCATGGACACCCTGAGG ACTCACCCTGAGAGATTTGCAGGAAGAGGATTACAAATCCGAGACATCCTAAAAGATGAAGAGGCGCTGA CCCTATTTCTCATGAGAAACATTGGCCTGTCTGACTCGGTTGCCCATCTTCTGGTCAACTCCCAAGTTCG TGTGGAGCAGTTTGCTTATGGAGTCCCAGACTTGGAACTGACAGACATTGCCTGCAGCGAGGCCCTCCTG CAGCGCTTCATCATCTTCAGCCAGCGTCGGGGGGCACAGACGGTACGCGATGCCCTGTGTCCCCTCTCCC AGGTCACCCTACAGTGGATAGAAGACACTCTGTATGCCGATGTGGACTTCTTCAAACTCTTCCATGTGCT CCCCACACTCCTGGACAGCAGTTCTCAAGGAATCAACTTGAGATTTTGGGGAGGAATATTATCTGATCTG TCACCAAGAATGCAAAAGTTTATCCATCGGCCAAGTGTTCAAGACTTGCTATGGGTGAGCAGACCTCTCC TGCAGAACGGTGGTCCTGAGACCTTCACACAGCTGATGAGCATCCTGTCTGACCTCCTGTGTGGGTACCC AGAGGGAGGAGGCTCCCGAGTGTTCTCCTTTAACTGGTATGAAGACAATAACTATAAAGCCTTCCTGGGG ATTGATTCCACAAGGAAAGACCCCGCCTATTCTTACGACAAAAGAACAACATCCTTTTGTAATTCATTGA TCCAGAGCCTGGAGTCAAACCCTTTAACCAAAATAGCCTGGAGGGCGGCAAAGCCATTGCTGATGGGAAA AATCCTCTTTACTCCAGATTCCCCTGCTGCTCGAAGGATAATGAAGAATGCCAACTCAACTTTTGAAGAA CTGGATCGAGTTAGGAAGTTGGTAAAAGCCTGGGAGGAAGTGGGGCCCCAGATCTGGTACTTCTTTGAGA AGAGCACACAGATGACCGTGATCCGAGACACCCTGCAGCACCCAACCGTCAAAGACTTCATAAATAGGCA GCTCGGAGAAGAAGGCATTACCACCGAAGCCGTATTAAACTTCTTCTCTAACGGTCCCCAAGAGAAGCAG GCTGATGATATGACCAGCTTTGACTGGAGGGACATATTCAACATCACTGACCGATTCCTACGCTTGGCTA ATCAATACCTGGAGTGTCTGGTCCTGGATAAGTTTGAAAGTTATGATGATGAAGTGCAGCTCACCCAACG AGCCCTGTCTCTCCTGGAGGAGAACAGGTTCTGGGCCGGAGTGGTGTTCCCTGGCATGTATCCCTGGGCC AGCTCCTTACCTCCTCATGTGAAGTACAAGATTCGGATGGACATAGATGTGGTGGAGAAGACCAATAAGA TCAAAGACAGGTACTGGGATTCTGGTCCCAGGGCGGATCCTGTCGAAGATTTCCGGTACATCTGGGGAGG TTTTGCCTATCTACAGGACATGGTGGAGCAAGGAATCGTGAAGAGTCAGATGCAGGCAGAGCCTCCAATT GGAGTCTATCTCCAACAGATGCCTTATCCCTGCTTTGTGGATGACTCCTTCATGATCATCCTGAATCGCT GTTTCCCTATCTTCATGGTGCTGGCGTGGATCTACTCTGTCTCCATGACCGTTAAGGGCATTGTTTTGGA GAAGGAGCTGAGGCTGAAGGAGACCTTGAAAAACCAAGGCGTCTCTAATGCTGTCATCTGGTGTACCTGG TTCCTGGATAGCTTCTCCATCATGGCGCTGAGTATCTTCCTCCTGACGCTGTTCATCATGCATGGAAGGA TCCTCCATTACAGCGATCCCTTCATTCTCTTCCTGTTCTTGTTGGCCTTTGCCACTGCGACCATCATGCA GAGCTTCCTGCTCAGTACTTTGTTTTCCAAGGCCAGCCTTGCAGCAGCCTGCAGTGGGGTCATCTACTTC ACCCTCTACCTACCACACGTTCTGTGCTTTGCCTGGCAGGACCGGATGACGGCCGACCTGAAGACGACTG TGAGCCTACTTTCTTCCGTGGCATTTGGGTTTGGCACCGAGTACCTGGTCCGCTTTGAGGAGCAAGGCCT GGGGCTGCAATGGAGCAACATTGGGAAGAGTCCCCTGGAAGGGGATGAGTTCAGTTTCCTGCTGTCTATG AAGATGATGCTTCTCGATGCTGCTCTCTACGGCTTGCTTGCTTGGTATCTTGACCAGGTTTTCCCAGGAG ACTATGGGACCCCACTTCCCTGGTACTTCCTTCTGCAGGAGTCCTACTGGCTTGGTGGTGAAGGTTGTTC GACCAGAGAAGAAAGGGCTCTGGAAAAGACTGAACCCTTAACAGAGGAGATGGAGGATCCAGAGCACCCA GAAGGAATGAATGACTCCTTTTTTGAACGCGAGCTTCCAGGGCTGGTGCCTGGTGTGTGTGTGAAGAACC TGGTGAAGGTTTTTGAGCCCAGTGGCCGGCCAGCTGTGGACCGTCTGAACATCACTTTCTATGAGAACCA AATCACGGCGTTCCTGGGTCACAACGGAGCGGGAAAGACCACCACCTTGTCCATCCTGACAGGACTGTTG CCACCGACGTCAGGAACTGTGCTCATTGGGGGAAAAGACATTGAAACCAACCTGGATGTAGTACGGCAGA GCCTGGGCATGTGTCCACAACACAACATCCTGTTTCATCACCTCACGGTGGCTGAGCACATCTTGTTCTA TGCCCAGCTGAAAGGGAGATCCTGGGAGGAGGCCCAGCTTGAGATGGAAGCCATGCTAGAAGACACGGGC CTCCACCATAAGAGGAATGAAGAAGCTCAGGACCTTTCAGGTGGCATGCAGAGGAAGCTGTCTGTTGCCA TTGCTTTTGTGGGAGATTCTAAGGTGGTGGTCCTGGATGAGCCCACCTCTGGGGTGGACCCCTACTCCAG ACGCTCCATCTGGGACCTGCTCCTGAAGTATCGCTCAGGCAGAACCATCATCATGTCCACTCACCACATG GACGAGGCAGACCTCCTTGGGGACCGCATTGCCATCATTTCTCAGGGAAGGCTCTACTGCTCTGGAACCC CGCTCTTCCTCAAGAACTGCTTTGGCACAGGCTTCTACTTGACCTTAGTTCGCAAGATGAAAAACATCCA GAGCCAAAGAGGTGGCTGTGAGGGGGTCTGCAGCTGTACATCAAAGGGTTTCTCTACCAGGTGTCCAACC CGAGTCGATGAGATAACAGAAGAACAAGTCCTGGATGGAGATGTGCAGGAGCTGATGGATTTGGTATACC ACCATGTCCCAGAGGCAAAGCTGGTGGAATGCATTGGTCAAGAACTTATCTTCCTCCTTCCAAACAAGAA TTTCAAGCAGAGAGCATATGCCAGCCTTTTCCGAGAGCTGGAGGAGACTCTGGCTGACCTGGGGCTCAGC AGCTTTGGAATTTCTGACACTCCCCTGGAAGAGATTTTCCTGAAGGTCACAGAGGATGCTGGAGCGGGCT CTATGTTTGTAGGTGGCGCTCAGCAGAAAAGAGAACAAGCCGGTCTCCGGCACCCTTGTTCGGCTCCCAC TGAGAAGCTCAGGCAGTATGCCCAGGCCCCACATACCTGTTCCCCAGGACAAGTGGATCCTCCCAAGGGC CAACCTTCCCCAGAGCCAGAGGACCCCGGTGTCCCATTCAACACAGGTGCTCGGCTGATTCTTCAACATG TGCAGGCCCTGCTAGTCAAGCGATTCCATCACACCATCCGCAGCCGCAAGGACTTTGTGGCTCAGATTGT TCTCCCTGCCACTTTCGTGTTCTTGGCTCTGATGCTTTCAATCATTGTGCCTCCGTTTGGTGAATTTCCA GCTTTGACTCTTCATCCCTGGATGTATGGGCATCAATATACCTTCTTCAGCATGGACGAACCCAACAATG AACACCTTGAAGTACTGGCAGATGTCCTTCTGAACAGGCCAGGCTTTGGCAACCGTTGTCTAAAGGAAGA GTGGCTTCCGGAGTACCCATGCATTAATGCAACCTCCTGGAAGACGCCCTCCGTGTCCCCGAACATCACC CACCTGTTCCAGAAGCAGAAATGGACAGCAGCCCACCCCTCTCCCTCCTGCAAGTGCAGCACCAGAGAGA AGCTCACCATGTTGCCCGAGTGCCCCGAGGGTGCTGGAGGGCTCCCACCCCCACAGAGGACACAGCGCAG CACTGAAGTCCTACAAGACCTCACGAACAGGAACATCTCCGACTACTTGGTAAAAACGTACCCTGCTCTC ATAAGAAGCAGCTTAAAGAGCAAATTCTGGGTCAATGAACAGAGGTATGGAGGAATTTCCATCGGAGGAA AACTCCCTGCTATCCCCATCAGCGGGGAAGCACTTGTTGGCTTTCTAAGTGGCCTTGGCCAGATGATGAA CGTGAGCGGGGGTCCTGTCACCAGGGAGGCCTCCAAAGAAATGTTAGATTTCCTCAAACATCTTGAAACC ACAGACAACATTAAGGTATGGTTTAACAACAAGGGCTGGCATGCCCTGGTCAGCTTTCTGAATGTGGCTC ACAACGCCATCTTACGGGCCAGCCTGCCCAGGGACAGGGACCCTGAGGAGTATGGAATCACTGTCATCAG CCAGCCTCTGAACCTGACCAAGGAGCAGCTCTCGGACATCACAGTACTGACTACTTCCGTGGATGCCGTG GTTGCCATATGTGTGATTTTCGCCATGTCCTTCGTTCCAGCCAGCTTTGTCCTTTACTTGATCCAGGAGA GGGTGACGAAAGCTAAACATTTGCAGTTTATCAGTGGTGTGAGCCCCACCACCTACTGGCTGACCAACTT CCTCTGGGATATTATGAATTATGCTGTGAGTGCGGGATTGGTGGTGGGCATCTTCATTGGATTTCAAAAG AAAGCCTACACATCCCCAGACAACCTTCCTGCTCTCGTCTCTCTGCTCATGCTGTATGGATGGGCAGTCA TTCCTATGATGTATCCAGCATCCTTCCTGTTTGAAGTCCCCAGCACAGCCTATGTGGCTTTGTCCTGTGC TAACCTGTTCATCGGCATCAACAGCAGCGCCATCACCTTCGTCCTGGAATTATTTGAGAATAACCGGACG CTGCTCAGGTTCAATGCCATGTTGAGGAAGTTGCTCATTGTCTTCCCCCACTTCTGCCTGGGCAGGGGCC TCATTGACCTGGCACTGAGCCAAGCTGTGACAGACGTCTATGCCCAGTTTGGTGAGGAGTACTCTGCAAA CCCATTCCAGTGGGACCTGATTGGGAAGAACCTGGTTGCTATGGCAATAGAAGGGGTGGTATACTTCCTT CTGACCCTGCTCATCCAACACCATTTTTTCCTCACCCGGTGGATCGCTGAGCCTGCTAGAGAGCCCGTTT TTGATGAAGATGACGATGTGGCTGAAGAAAGACAAAGAGTTATGAGTGGGGGAAATAAAACCGACATCTT AAAGCTAAACGAACTAACCAAGGTTTACTCAGGCTCTTCCAGTCCAGCAGTAGATCGGTTATGTGTTGGA GTTCGACCTGGAGAGTGCTTTGGCCTCCTGGGAGTGAATGGTGCAGGCAAAACCACCACATTCAAGATGC TCACTGGGGACACCACAGTGACATCGGGGGATGCTACTGTGGCAGGCAAGAGCATTTTAACTAGTATTTC TGATGTCCATCAAAACATGGGCTACTGTCCTCAGTTTGATGCAATCGATGACCTGCTCACAGGCAGAGAA CACCTTTACCTCTATGCCAGGCTGCGGGGCGTGCCATCGAAGGAAATCGAGAAGGTTGCCAACTGGGGTA TCCAGAGCCTGGGCTTGTCTCTCTACGCTGACCGCCTGGCAGGCACCTACAGTGGAGGCAATAAGAGGAA ACTCTCTACAGCCATAGCTCTCACTGGCTGCCCTCCCCTGCTGCTGCTGGATGAGCCCACGACAGGGATG GATCCCCAGGCACGCCGCATGCTGTGGAACACCATTGTGAGCATCATCAGAGAAGGGAGAGCTGTGGTTC TCACCTCCCACAGCATGGAAGAATGTGAAGCTCTGTGTACGCGGCTGGCCATCATGGTGAAGGGCACCTT TCAGTGTCTGGGTACCATCCAACACCTCAAGTACAAGTTTGGAGACGGCTACATTGTCACAATGAAAATC AAATCTCCAAAGGACGACTTGCTTCCCGATTTGAATCCTGTGGAGCAGTTCTTCCAGGGCAACTTCCCTG GCAGCGTGCAGAGGGAGAGACACCACAGCATGCTCCAGTTCCAGGTCCCCTCGTCCTCCCTGGCCAGGAT CTTCCAGCTGCTCATTTCCCACAAGGACAGCCTGCTCATCGAGGAGTACTCAGTCACCCAGACCACGCTG GACCAGGTGTTTGTAAACTTCGCTAAACAGCAGACTGAGACCTATGACCTCCCTCTGCACCCCCGGGCTG CTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAATCCGGACGGCTGCAGACACAGGAGCCTTTGCCCGC AGGATCTGAACAACTGGCTAACGGAAGCAACCCCACGGCAGCAGAAGATAAGCACACCAGGAGTCCACAG TGA
Translation (2310 aa): MGFLRQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSQHECHFPNKAMPSAGLLPWL QGIFCNMNNPCFQNPTPGESPGTVSNYNNSILARVYRDFQELFMDTPEVQHLGQVWAELRTLSQFMDTLR THPERFAGRGLQIRDILKDEEALTLFLMRNIGLSDSVAHLLVNSQVRVEQFAYGVPDLELTDIACSEALL QRFIIFSQRRGAQTVRDALCPLSQVTLQWIEDTLYADVDFFKLFHVLPTLLDSSSQGINLRFWGGILSDL SPRMQKFIHRPSVQDLLWVSRPLLQNGGPETFTQLMSILSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLG IDSTRKDPAYSYDKRTTSFCNSLIQSLESNPLTKIAWRAAKPLLMGKILFTPDSPAARRIMKNANSTFEE LDRVRKLVKAWEEVGPQIWYFFEKSTQMTVIRDTLQHPTVKDFINRQLGEEGITTEAVLNFFSNGPQEKQ ADDMTSFDWRDIFNITDRFLRLANQYLECLVLDKFESYDDEVQLTQRALSLLEENRFWAGVVFPGMYPWA SSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGIVKSQMQAEPPI GVYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKGIVLEKELRLKETLKNQGVSNAVIWCTW FLDSFSIMALSIFLLTLFIMHGRILHYSDPFILFLFLLAFATATIMQSFLLSTLFSKASLAAACSGVIYF TLYLPHVLCFAWQDRMTADLKTTVSLLSSVAFGFGTEYLVRFEEQGLGLQWSNIGKSPLEGDEFSFLLSM KMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPLTEEMEDPEHP EGMNDSFFERELPGLVPGVCVKNLVKVFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLL PPTSGTVLIGGKDIETNLDVVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTG LHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHM DEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRGGCEGVCSCTSKGFSTRCPT RVDEITEEQVLDGDVQELMDLVYHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLS SFGISDTPLEEIFLKVTEDAGAGSMFVGGAQQKREQAGLRHPCSAPTEKLRQYAQAPHTCSPGQVDPPKG QPSPEPEDPGVPFNTGARLILQHVQALLVKRFHHTIRSRKDFVAQIVLPATFVFLALMLSIIVPPFGEFP ALTLHPWMYGHQYTFFSMDEPNNEHLEVLADVLLNRPGFGNRCLKEEWLPEYPCINATSWKTPSVSPNIT HLFQKQKWTAAHPSPSCKCSTREKLTMLPECPEGAGGLPPPQRTQRSTEVLQDLTNRNISDYLVKTYPAL IRSSLKSKFWVNEQRYGGISIGGKLPAIPISGEALVGFLSGLGQMMNVSGGPVTREASKEMLDFLKHLET TDNIKVWFNNKGWHALVSFLNVAHNAILRASLPRDRDPEEYGITVISQPLNLTKEQLSDITVLTTSVDAV VAICVIFAMSFVPASFVLYLIQERVTKAKHLQFISGVSPTTYWLTNFLWDIMNYAVSAGLVVGIFIGFQK KAYTSPDNLPALVSLLMLYGWAVIPMMYPASFLFEVPSTAYVALSCANLFIGINSSAITFVLELFENNRT LLRFNAMLRKLLIVFPHFCLGRGLIDLALSQAVTDVYAQFGEEYSANPFQWDLIGKNLVAMAIEGVVYFL LTLLIQHHFFLTRWIAEPAREPVFDEDDDVAEERQRVMSGGNKTDILKLNELTKVYSGSSSPAVDRLCVG VRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTSISDVHQNMGYCPQFDAIDDLLTGRE HLYLYARLRGVPSKEIEKVANWGIQSLGLSLYADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGM DPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFGDGYIVTMKI KSPKDDLLPDLNPVEQFFQGNFPGSVQRERHHSMLQFQVPSSSLARIFQLLISHKDSLLIEEYSVTQTTL DQVFVNFAKQQTETYDLPLHPRAAGASWQAKLEEKSGRLQTQEPLPAGSEQLANGSNPTAAEDKHTRSPQ
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