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Report for CCDS38229.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38229.1 Public Mus musculus 2 Cep152 23 108 98 CCDS HistoryNCBI Gene:99100Re-query CCDS DB by CCDS ID:38229.1Re-query CCDS DB by GeneID:99100See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38229.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000089776.2 ENSMUSP00000087208.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000089776.2Link to Ensembl Protein Viewer:ENSMUSP00000087208.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000089776Re-query CCDS DB by Protein ID:ENSMUSP00000087208
Original member Current member NCBI NM_001081091.1 NP_001074560.1 Accepted alive Link to Nucleotide Sequence:NM_001081091.1Link to Protein Sequence:NP_001074560.1Re-query CCDS DB by Nucleotide ID:NM_001081091Re-query CCDS DB by Protein ID:NP_001074560Link to BLAST:NP_001074560.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074560.1 1736 A2AUM9 1736 100% 0 0

Chromosomal Locations for CCDS 38229.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 125563400 125564397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125566209 125566321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125566533 125566689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125568824 125568927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125569555 125569651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125571669 125571833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125576714 125576855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125579374 125580024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125581696 125581827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125583792 125584064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125586331 125586474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125587601 125587727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125587893 125588021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125589456 125589565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125590110 125590232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125594873 125595071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125601149 125601312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125602842 125602933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125605336 125605483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125611008 125611208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125612937 125613076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125614288 125614431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125618373 125618541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125619666 125619890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125619997 125620069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125620287 125620390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 125621173 125621259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5211 nt):
ATGTCATTGGAGTTTGGCAGTGTAGCACTGCAGACACAAAATGAAGATGAAGAATTTGACAAAGAAGACT
TTGAAAGGGAAAAAGAGTTGCAGCAGCTACTCACAGACCTCCCTCACGACATGCTGGACGATGAGCTCTC
CTCTCCTGAGCGCCACGATTCTGACTGCAGTATGGACGGCAGAGCGGCAGAACCGCATCCTTCTGAGCAT
CTGGAAAGGAAGTGGATTGAGCGGGATATACTGCCCAAGCCTCACAGCATGAACTGTGGCAATGGCTGGG
AAGAAAATCGAAGTAAAACCGAAGACCAGCATCTTGGGTACCACCCTGGAGAAGGTGGGGATGAAGGCGG
AAGTGGCTATAGCCCTCCAGGTAAACGGGAGCAGGCAGATTTGTATCGCCTTCCTGAAGACTTTAGGCCA
TACACCGGCGGTTCGAAGCAGGCAGCCAGCGTGATTACGTTTTCAGATCCTCAGAGGGACAATTTTCAGC
AATTTGGTTTATCTCGAGGACCCAGCTGTGGAGCTTTGGAGCCGTATAAAGCTGTATATAAGCCTTACCG
TAACTCCTCTGTGCAGAAGAACAGCTCGCCAGCCCAGGAGGTAGCAGCAAGTGACATGTTTGAAGGCTTG
CAGCAACAGTTTTTAGGAGCTAATGAAACAGACTCTGCAGAAAATATACATATTATTCAACTCCAGGTTC
TTAACAAAGCAAAGGAGAGACAACTGGACAGCTTGGTTGAAAAGCTGAAGGACAGCGAACGCCAGGTTCG
GTATCTGAGCCACCAGCTGCTGATAGTCCAAGATGAAAAGGATGGCTTGGCCCTCAGCCTTCGGGAATCC
CAGCAGCTCTTTCAGAATGGCAAGGAGAGGGAGATGCAGCTTGAAGCTCAGATTGCAGCACTGGAGGCGC
AGGTCGAGGCCTTCCGAGTTAGTGAAGAGAAGCTCACCAAGAAGCTCAGAACAACCGAGATCACCCTGGA
AAGCCTGAAACAGCAACTGGTGGAGCTCCATCATTCTGAGTCACTTCAGCGAGCCAGAGAGCACCATGAA
AGCATCGTTGCCAGCCTCACACAGAAGCACGAAGAGCAGGTGTCATCCTTACAGAAGAATTTGGACGCTA
CCATAACGGCCCTTCAGGAACAGGAAAGTATTTGCACGCGTTTGAAGGACCACGTGCAACAACTGGAGCG
GAACCAGGAAGCAGTCAGATTAGAGAAGACGGAGCTCATTAATAGGCTGACGAGGAGTCTAGAGGACAGT
CAGAAGCAATGTGCCCACCTGCTGCAATCAGGCTCTGTGCAGGAGGTGGCTCAGCTACAGCTACAGTTGC
AGCAAGCACAGAAGGCCCACGTCCTAAGTGAGAGCATGAATAAGGCTTTGCAAGAGGAATTAACAGAGCT
TAAAGATGAGATTTCGCTCTATGAATCTGCTGCAGAACTCGGAGTCCTTCCAGGTGACTCCGAAGGAGAC
CTGAGTATAGAGCTCACTGAATCATGTGTGGACTTGGGCATTAAAAAAGTCAATTGGAAACAATCCAAAG
CTAACAGGGTCACACAGCAGGAGTCCCCAGATGAAGACCCTTCGAAGGATGAGCTTATCCTGAAGCTGAA
AACGCAAGTCCAGCGCTTGCTGACTAGCAACTCCGTGAAGCGACATCTGGTGTCTCAGCTGCAGAGCGAT
CTCAGAGAGTGCCGGGAGACAATGGAAGCTTTCCAGCAATCCAAGGATGGTGACAGCGGCATGGAGACTA
AAACAGACACCTCTGAAAAAACAACTAAGCAGTTATGGCTCGAATCTTCTGAGGCAATTAACAGAGAAGA
TATTCTGCAACTGAAAAATGAAGTTCAAGTTTTACAAAAACAGAATCAGGAACTGAAAGAGGCTGAAGAA
AAACTGAGAAGTACAAATCAAGACTTGTGTAATCAGATGAGACAGATGGTGCAGGAGTTTGACCACGATA
AGCAGGAAGCTGTGGCTAGGTGTGAGAGGACTTACCAGCAGCACCACGAAGCCATGAAGGCGCAGATCCG
AGAGAGCCTTCTAGCAAAGCACGCTGTGGAGAAGCAGCATCTCTTGGAGGTCTATGAGGGGACCCAGTCA
CAGCTCAGGTCTGACCTGGATAAGATGAACAAGGAGATGGCTGCTGTGCAGGAGTGTTACCTGGAGGTAT
GCAGAGAGAAGGATGGGCTGGAGTCCACTCTCAGGAAGACCATGGAAAAGGCTCAGGAGCAGAAGAGACA
GCTTTTGGAAGCCAGAGAAGAATACGTGCGCAAGCTGAAGTTAGAACTGGAAGAGAAGTACCAAGAAACT
CTGAAGACGGAAAGGCAGAGCTGGCTGCAGGAGCAAGCTGCTGGAGCTACACAGCAGGCTGAGAAGGAGA
GCAGACAAAAACTCATTCAACAGCTGGAAAAGGAGTGGCAGTCCAAACTGGATGACAGTCTTGCGGCTTG
GAGAAAGACCACCTCAGACCGCGGCAGCCAGACCGAGCAGGTGGCCTGTCCTGCTGCCGTGTCTAAGGCA
GAGGCAGCAGCAGTCCTGGCAGAGGAGCAGGCTCGCCAAGTCCAGCAGGAGAAGGAGCTTGCTACCAAGG
AGGCTCTGAGGAAGCCCGAAGTTGAGTTGGAGCTCAAGTACTGTGAGATTATTGCACAAAAGGTGGAAAC
AGCTGTGCAGAATGCCCGAAGTCGCTGGATACAGGAGCTGCCCATGCTTGCAGAGTACAAGGCTCTGCTC
AGAGCCCAGCAGCAGGAGTGGGCAAAGCAGCAGGAGCTGGCTGTGGCCCATAGGCTGTCACTCGCACTCT
CTGAAGCTAAAGAGAAGTGGAAAAGTGAGCTGGAAAATATGAAGCCAAATGTCATGTCTGTCAAGGAGCT
GGAGGAGAAAGTCCACTCTCTGCAGAAGGAGCTGGAGTTGAAGGATGAGGAAGTCCCAGTGATTGTCAGA
GCTGAGGTGGCTAAGGCCAGAACTGAGTGGAACAAAGAAAAACAGGAAGAAATCCACAAGATTCAAGAAC
AAAACGAGGAGGATTATCGGCAGTTTTTAGAGGATCATCGAAATAAAATTAATGAGGTGCTTGCAGCAGC
TAAAGAGGACTTTGTGAAGCAAAAAGCTGAACTACTTCTTCAGAAGGAGACAGAATTCCAGGCATGTTTG
GACCAGAGTCGCAAGGAGTGGACACTGCAGGAAGCCCAGCAGACACAAGTGGAAATCCGTCAGTATGAGG
AAGACACCCTCACTGTACTTGCCTATCTTCTAAAGGACACGCAGCTGGAGTACGGTGGGGACTCACAGGA
CAAGCAGCTTTTGGAAGCCATGTCAGCTTGTTCTTCCAAATGGATATCTGTACAGTACTTTGAGAAAGTA
AAAGCCTGCATACAAAAAGCTCTTCACGATATGCTGTCCTTGCTTACAGACAGTGTCGCCTCAGAGCAGG
AGAAGAGAAAGGTGGTCAAGAGCTCTGCAGACACTGTCAGCTGGACCAGTAGCGAAGGAGACTCTGCGGT
CCCAGTGCCCCTTCCTGACTCCACCTCTGTACGCTGTGCTCAGTCCTCGGCCTGGCTGAAAGCAGAAGCA
GAAACTGATAAAAAGATCTGTGAAATTAAAGGTTTACGCTGTGGACACTGCTTTCAAGAGCTTGAAAAGG
AAAAGCAGGAGTGTCAAGATCTGAGAAGGAAACTGGAGAAGTGCCGTAGGCACCTTCAGCATTTAGAAAG
GACACACAGAGCCGCAGTGGAGAAACTTGGAGAGGAGAACAGCAGGGTGGTTGAAGAATTAATAGAGGAG
AACCATGACATGAAGAATAAACTGGAGGCACTGAGGGCCCTTTGCAGAACGCCACCACGGTCACTGTCTG
CAGGAGCCGCTGAGAGTGCTGGGCCGTCATGCAGTAGGCAGGCCTTGGAAGAACTCCGCGGGCAGTACAT
TAAAGCTGTGAGAAAAATTAAACGTGACATGCTTCGGTATATTCAGGAGAGCAAGGAAAGAGCTGCAGAG
ATGGTAAAAGCGGAAGTGTTGCGGGAACGGCAGGAAACTGCACGGAAGATGCGCAATTATTACCTGAGTT
GTCTTCAGCAGATCTTGCAGGATAATGGAAAAGAGGAGGGAGCTGAGAAAAAGATTATGAGTGCTGCTAG
CAAACTCGCTACAATGGCGGAGTTGCTGGGGACGATCGCGGAGTCAGACTGCAGAGTCCGGTGTGCCCAG
GCAGGCCGCTCAGTAGCACTTCCTTTGGCTTCAGAGATGCTGACGGGCACTGAAAGATCAGAAAGGAGTG
GTGTGAATCACAATATTCCACATTACGTTGAAAGCAAACCAAACAGTGGAAAGACCCTCCCCAGGAGTGT
GTGTGAGCAGCTGCCTGGGAGGAAGGCTGCGCCCAGGTCACAGAGGCGGTTAGAGGAATCGAAGCACAGA
GAGATGAGACCCATGGCTTCCACAGCTTTGCCTTCAGACTGTCGCTGTGGGGATGCGAGTTGCAGGCACT
CAGGCGTCTTGGCAAAGGATGTTGCTCCTGAATTTGTTCCGTGCCAGGGCGAGGGAGGCTTTGACTTGCA
CGAGAAGAGAGATGCACTTGGAGCTGGCTCTGAGCCGCTGCTCTATTCAGCTGCTCACTCCTTCCTTGGA
GGTGCCGAAAAGAACTCTTCTCCTAGATGCATCTCAGAGTCCAGGCACACAACCCTGAGAAGTCCCAGTG
AAATGCCAAGGTTAAAGGCATTGATGTGTGGTTCTCCTACAGAAACTGACAGTATTGCATCTGAGAAGAG
TCAGGGAGTGGGCTCTCAGGACTCCCCAGTGAAGGATGGCGTGGGGCCCAGCAGCTCTCCAGCCTGGCCT
TCTGACAGTACCTTACCCTGTGGCAGTCCTGCAGTGCTGTTTCTTGGGGATGGGTCACAAAGGACTCAGG
AGATGCTGGGGGACTCTGTTCAGTGGAAACAATTCTCAGCAACCAGTTGTCATCCAGATGCCCAGAAAAG
TAATATGGTTTGTCGGAGTAGTCACACTCTAGATCTGCCCAAAGAAACCCTGCATTCCCAACAAGGGAAG
ATGGGTGCAACTCTGGGACACCCATCTCCACAGAGCACTGATATGTTAAAGACAGATTTCAAGAGACTCA
GTGGCACAGGACCATCTTCATTGTGTCAGAAGCCTTTGATAAAGTTAACTGCTCCGATGCCCAGCCAACA
GGATAGTGGCTTTGACAGCCCGCTTGAGTAA

Translation (1736 aa):
MSLEFGSVALQTQNEDEEFDKEDFEREKELQQLLTDLPHDMLDDELSSPERHDSDCSMDGRAAEPHPSEH
LERKWIERDILPKPHSMNCGNGWEENRSKTEDQHLGYHPGEGGDEGGSGYSPPGKREQADLYRLPEDFRP
YTGGSKQAASVITFSDPQRDNFQQFGLSRGPSCGALEPYKAVYKPYRNSSVQKNSSPAQEVAASDMFEGL
QQQFLGANETDSAENIHIIQLQVLNKAKERQLDSLVEKLKDSERQVRYLSHQLLIVQDEKDGLALSLRES
QQLFQNGKEREMQLEAQIAALEAQVEAFRVSEEKLTKKLRTTEITLESLKQQLVELHHSESLQRAREHHE
SIVASLTQKHEEQVSSLQKNLDATITALQEQESICTRLKDHVQQLERNQEAVRLEKTELINRLTRSLEDS
QKQCAHLLQSGSVQEVAQLQLQLQQAQKAHVLSESMNKALQEELTELKDEISLYESAAELGVLPGDSEGD
LSIELTESCVDLGIKKVNWKQSKANRVTQQESPDEDPSKDELILKLKTQVQRLLTSNSVKRHLVSQLQSD
LRECRETMEAFQQSKDGDSGMETKTDTSEKTTKQLWLESSEAINREDILQLKNEVQVLQKQNQELKEAEE
KLRSTNQDLCNQMRQMVQEFDHDKQEAVARCERTYQQHHEAMKAQIRESLLAKHAVEKQHLLEVYEGTQS
QLRSDLDKMNKEMAAVQECYLEVCREKDGLESTLRKTMEKAQEQKRQLLEAREEYVRKLKLELEEKYQET
LKTERQSWLQEQAAGATQQAEKESRQKLIQQLEKEWQSKLDDSLAAWRKTTSDRGSQTEQVACPAAVSKA
EAAAVLAEEQARQVQQEKELATKEALRKPEVELELKYCEIIAQKVETAVQNARSRWIQELPMLAEYKALL
RAQQQEWAKQQELAVAHRLSLALSEAKEKWKSELENMKPNVMSVKELEEKVHSLQKELELKDEEVPVIVR
AEVAKARTEWNKEKQEEIHKIQEQNEEDYRQFLEDHRNKINEVLAAAKEDFVKQKAELLLQKETEFQACL
DQSRKEWTLQEAQQTQVEIRQYEEDTLTVLAYLLKDTQLEYGGDSQDKQLLEAMSACSSKWISVQYFEKV
KACIQKALHDMLSLLTDSVASEQEKRKVVKSSADTVSWTSSEGDSAVPVPLPDSTSVRCAQSSAWLKAEA
ETDKKICEIKGLRCGHCFQELEKEKQECQDLRRKLEKCRRHLQHLERTHRAAVEKLGEENSRVVEELIEE
NHDMKNKLEALRALCRTPPRSLSAGAAESAGPSCSRQALEELRGQYIKAVRKIKRDMLRYIQESKERAAE
MVKAEVLRERQETARKMRNYYLSCLQQILQDNGKEEGAEKKIMSAASKLATMAELLGTIAESDCRVRCAQ
AGRSVALPLASEMLTGTERSERSGVNHNIPHYVESKPNSGKTLPRSVCEQLPGRKAAPRSQRRLEESKHR
EMRPMASTALPSDCRCGDASCRHSGVLAKDVAPEFVPCQGEGGFDLHEKRDALGAGSEPLLYSAAHSFLG
GAEKNSSPRCISESRHTTLRSPSEMPRLKALMCGSPTETDSIASEKSQGVGSQDSPVKDGVGPSSSPAWP
SDSTLPCGSPAVLFLGDGSQRTQEMLGDSVQWKQFSATSCHPDAQKSNMVCRSSHTLDLPKETLHSQQGK
MGATLGHPSPQSTDMLKTDFKRLSGTGPSSLCQKPLIKLTAPMPSQQDSGFDSPLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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