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Report for CCDS37908.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37908.1 Public Mus musculus 19 Hnrnpul2 23 108 98 CCDS HistoryNCBI Gene:68693Re-query CCDS DB by CCDS ID:37908.1Re-query CCDS DB by GeneID:68693See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37908.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096753.4 ENSMUSP00000094515.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096753.4Link to Ensembl Protein Viewer:ENSMUSP00000094515.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000096753Re-query CCDS DB by Protein ID:ENSMUSP00000094515
Original member Current member NCBI NM_001081196.1 NP_001074665.1 Accepted alive Link to Nucleotide Sequence:NM_001081196.1Link to Protein Sequence:NP_001074665.1Re-query CCDS DB by Nucleotide ID:NM_001081196Re-query CCDS DB by Protein ID:NP_001074665Link to BLAST:NP_001074665.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074665.1 745 Q00PI9 745 100% 0 0

Chromosomal Locations for CCDS 37908.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 8820282 8820813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8822804 8822939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8823230 8823306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8823530 8823669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8824221 8824311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8824406 8824518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8824860 8825123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8825271 8825393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8825972 8826100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8826644 8826812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8829750 8829950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8830888 8830961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8831225 8831332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8831455 8831535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2238 nt):
ATGGAGGTGAAGCGGCTGAAAGTGACCGAGCTGCGGTCGGAGCTTCAGCGGCGGGGCCTGGATTCGCGCG
GCCTCAAAATGGATCTGGCGCAGCGTCTTCAGGAGGCACTGGATGCTGAGATGCTGGAGGACGAGGCCGG
CGTTGGTGGGGCCGGGCCCGGTGGGGCCTGCAAGGCGGAGCCTCGGCCTGTGGCCGCGTCGGGCGGAGGC
CCGGGCGGGGACGAGGAGGAGGAGGACGACGACGAGGAGGAGGACGAGGAGGCGCTGCTTGAGGACGAAG
ACGAGGAACCACCACCTGCTCAGGCTTTGGGCCAGGCCGCGCAGCCGCCTCCGGAGCCCCCGGAGACGTC
AGCCATGGAGGCCGAGTCCGAAGCTTCCGACACACCGGCGGAGGCCACGGCTGGGTCAGGTGGGGTAAAT
GGTGGCGAAGAGCATGACAACGGCAAGGGGGAGGAAGACGGGCCGGAGGAACGGAGCGGAGACGAGACTC
CGGGATCCGAGGCACCGGGTGACAAGGCCGTAGAGGAACAAGGAGATGACCAAGATAGTGAAAAGTCAAA
ACCAGCAGGCTCAGATGGTGAGCGGCGGGGGGTAAAGAGACAGCGGGATGAGAAGGATGAACATGGCCGA
GCTTACTATGAATTCCGAGAGGAGGCTTACCACAGCCGCTCAAAGTCCCCACCACCTCCAGAAGAAGAAG
CAAAAGATGAAGAGGAGGACCAGACGCTTGTGAACCTGGACACGTATACCTCGGATCTCCATTTTCAAAT
AAGCAAAGACCGATATGGAGGCCAGCCGCTCTTCTCAGAAAAGTTCCCTACCCTTTGGTCTGGGGCAAGA
AGTACTTATGGAGTAACAAAGGGAAAAGTATGCTTTGAAGCCAAGGTAACTCAGAATCTCCCAATGAAAG
AAGGCTGCACAGAAGTCTCTCTCCTTAGAGTTGGGTGGTCTGTTGATTTTTCCTGTTCACAGCTTGGTGA
AGACGAGTTCTCCTACGGTTTTGACGGAAGAGGACTCAAGGCAGAAAACGGGCAGTTTGAGGAATTTGGC
CAGACTTTTGGGGAGAATGATGTTATTGGCTGTTTTGCTAATTTTGAGACTGAAGAAGTTGAGCTTTCCT
TCTCCAAGAATGGAGAAGACTTGGGTGTGGCATTCCGAATTAGCAAGGAGTCTCTGGCAGATCGAGCCCT
TCTACCCCATGTCCTTTGCAAGAATTGTGTCGTAGAATTAAACTTTGGTCAGAAGGAGGAGCCCTTTTTC
CCACCACCAGAAGAGTTTGTGTTCATCCATGCTGTGCCTGTTGAGGAACGTGTGCGGACTGCAGTCCCTC
CCAAGACCATAGAGGAGTGTGAGGTGATTCTGATGGTGGGACTTCCTGGATCTGGAAAGACCCAGTGGGC
ACTGAAATACGCAAAAGACAACCCTGAGAGAAGATACAATGTTCTGGGAGCTGAGACTGTTCTCACGCAA
ATGAGGATGAAGGGACTTGAGGAGCCAGAGATGGACCCCAAAAGCCGAGACCTCTTAGTTCAGCAAGCCT
CCCAGTGCCTTAGTAAGCTGGTCCAGATTGCTTCACGATCAAAGAGGAATTTTATTCTTGATCAGTGTAA
TGTGTACAACTCTGGCCAACGAAGGAAGTTACTGCTGTTCAAGACATTCTCCAGGAAGGTGGTGGTAGTT
GTTCCTAATGAGGAAGATTGGAAGAGGAGGCTGGAGTTGAGGAAAGAAGTGGAGGGAGATGATGTGCCTG
AGTCTATAATGCTGGAGATGAAAGCCAACTTCTCTCTGCCTGAGAAATGCGACTATATGGATGAGGTGAC
ATATGGGGAGCTGGAAAAAGAGGAAGCTCAACCCATTGTTACTAAATACAAGGAGGAAGCAAGGAAGCTA
CTGCCCCCCTCTGAGAAGCGTACAAACCGCCGGAACAACCGCAACAAGAGAAACCGGCAGAACCGAAGCC
GAGGCCAAGGCTATGTGGGCGGGCAGCGCCGAGGCTACGACAACCGGGCCTACGGGCAGCAGTACTGGGG
GCAGTCTGGAAACAGAGGGGGCTACCGTAATTTCTATGATCGATACAGAGGTGACTATGAACGATTCTAC
AGTCGAGATTATGAGTACAACAGATACAGAGACTATTACAGACAATACAACCGGGATTGGCAGAATTACT
ACTACCACCACCAACAGGACAGAGACCGATACTACAGGAATTACTACGGTTACCAAGGGTATCGGTGA

Translation (745 aa):
MEVKRLKVTELRSELQRRGLDSRGLKMDLAQRLQEALDAEMLEDEAGVGGAGPGGACKAEPRPVAASGGG
PGGDEEEEDDDEEEDEEALLEDEDEEPPPAQALGQAAQPPPEPPETSAMEAESEASDTPAEATAGSGGVN
GGEEHDNGKGEEDGPEERSGDETPGSEAPGDKAVEEQGDDQDSEKSKPAGSDGERRGVKRQRDEKDEHGR
AYYEFREEAYHSRSKSPPPPEEEAKDEEEDQTLVNLDTYTSDLHFQISKDRYGGQPLFSEKFPTLWSGAR
STYGVTKGKVCFEAKVTQNLPMKEGCTEVSLLRVGWSVDFSCSQLGEDEFSYGFDGRGLKAENGQFEEFG
QTFGENDVIGCFANFETEEVELSFSKNGEDLGVAFRISKESLADRALLPHVLCKNCVVELNFGQKEEPFF
PPPEEFVFIHAVPVEERVRTAVPPKTIEECEVILMVGLPGSGKTQWALKYAKDNPERRYNVLGAETVLTQ
MRMKGLEEPEMDPKSRDLLVQQASQCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVV
VPNEEDWKRRLELRKEVEGDDVPESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKYKEEARKL
LPPSEKRTNRRNNRNKRNRQNRSRGQGYVGGQRRGYDNRAYGQQYWGQSGNRGGYRNFYDRYRGDYERFY
SRDYEYNRYRDYYRQYNRDWQNYYYHHQQDRDRYYRNYYGYQGYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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