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Report for CCDS37748.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37748.1 Public Mus musculus 18 Klhl14 23 108 98 CCDS HistoryNCBI Gene:225266Re-query CCDS DB by CCDS ID:37748.1Re-query CCDS DB by GeneID:225266See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37748.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049105.10 ENSMUSP00000042015.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049105.10Link to Ensembl Protein Viewer:ENSMUSP00000042015.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000049105Re-query CCDS DB by Protein ID:ENSMUSP00000042015
Original member Current member EBI ENSMUST00000122333.1 ENSMUSP00000113755.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122333.1Link to Ensembl Protein Viewer:ENSMUSP00000113755.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122333Re-query CCDS DB by Protein ID:ENSMUSP00000113755
Original member Current member NCBI NM_001081403.2 NP_001074872.1 Accepted alive Link to Nucleotide Sequence:NM_001081403.2Link to Protein Sequence:NP_001074872.1Re-query CCDS DB by Nucleotide ID:NM_001081403Re-query CCDS DB by Protein ID:NP_001074872Link to BLAST:NP_001074872.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074872.1 630 Q69ZK5 630 100% 0 0

Chromosomal Locations for CCDS 37748.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 21552502 21552642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21554612 21554769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21557798 21557956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21558037 21558227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21565511 21565589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21572698 21572787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21624577 21624698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 21651416 21652368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1893 nt):
ATGTCCAGATCCGGGGACAGGACCTCCACCTTCGACCCCAGCCACAGTGACAACCTGCTGCACGGTCTCA
ACCTGCTGTGGAGGAAGCAGCTATTTTGCGACGTAACCCTGACAGCCCAAGGCCAACAGTTCCACTGCCA
CAAGGCCGTGCTGGCCTCCTGCTCGCAGTACTTCCGATCACTCTTCTCCAGCCACCCCCCTCTCGGGGGA
GGGGTCGGCGGCCAGGACGGCCTGGGGGCCCCCAAGGACCAGCAGCAGCAGCAGCAGCCTCAGCAGCAGC
CTCCACAGCAGCAGCAGCCGCCGCCACAGGAGGAGCCCGGGACTCCTTCCTCCTCCCCCGACGACAAGCT
GCTGACCAGCCCCAGAGCCATCAACAACCTAGTGCTGCAGGGCTGCTCGTCCATCGGGCTGCGCCTAGTG
CTTGAATACCTCTACACAGCCAACGTGACCCTCTCCCTGGACACCGTGGAGGAAGTGCTGTCGGTCAGCA
AAATCCTGCACATTCCTCAGGTCACCAAGCTCTGCGTTCAGTTCCTCAACGACCAGATCTCGGTGCAGAA
CTACAAGCAGGTGTGCAAGATCGCCGCACTGCACGGCCTGGAGGAGACCAAGAAGCTGGCCAACAAGTAC
CTGGTGGAAGATGTGCTGTTGCTTAACTTCGAGGAGATGCGTGCCCTGCTGGACTCGCTGCCGCCCCCCG
TGGAGTCGGAGCTGGCACTTTTCCAGATGTCCGTGCTGTGGCTGGAGCACGACCGTGAGACCCGCATGCA
GTACGCGCCCGACCTCATGAAGCGCCTCCGCTTTGCGCTCATCCCCGCCCCGGAGCTGGTAGAGCGGGTC
CAGTCGGTGGATTTCATGCGCACCGACCCGGTCTGCCAGAAGCTGCTGCTGGACGCCATGAACTACCACC
TGATGCCCTTCAGGCAGCACTGCAGGCAGAGCCTGGCCAGCAGAATTCGCTCTAACAAGAAAATGCTGCT
GTTGGTTGGAGGATTGCCTCCCGGACCAGACCGGCTCCCCAGCAATCTGGTTCAGTATTATGATGACGAA
AAGAAGACATGGAAAATCCTCACAATTATGCCTTACAACAGTGCCCACCACTGCGTTGTAGAGGTAGAAA
ATTTCCTGTTCGTGTTGGGTGGAGAGGACCAGTGGAACCCAAATGGAAAACATAGTACAAATTTTGTCAG
CCGGTATGATCCCCGATTTAATAGTTGGATCCAACTTCCACCCATGCAAGAAAGAAGAGCCAGTTTCTAT
GCATGCCGCTTGGACAAGCATTTATATGTGATCGGCGGGAGGAACGAAACCGGTTACCTGTCCAGTGTGG
AGTGCTACAACCTAGACACAAACGAGTGGCGCTATGTGTCATCTCTGCCTCAGCCGCTGGCAGCCCATGC
AGGAGCAGTGCACAATGGGAAAATATATATTTCAGGGGGTGTGCACAACGGAGAGTACGTCCCATGGTTG
TATTGCTATGACCCAGTCATGGATGTCTGGGCCCGAAAACAGGACATGAACACAAAACGTGCTATTCACA
CCCTGGCTGTGATGAATGATCGCTTGTACGCAATCGGAGGGAATCATTTGAAAGGTTTCTCCCACCTGGA
CGTCATGCTTGTGGAGTGTTATGACCCAAAAGGCGACCAGTGGAATATTCTCCAAACTCCCATCCTGGAG
GGTCGAAGTGGCCCTGGCTGTGCGGTGCTTGACGACAGCATTTATCTAGTTGGAGGATACAGCTGGAGTA
TGGGTGCCTACAAGTCATCTACAATCTGCTATTGTCCAGAAAAAGGAACCTGGACAGAACTCGAAGGTGA
TGTGGCTGAACCCCTGGCAGGCCCAGCCTGTGCAACAGTCATTCTACCAGCCTGTGTACCCTACAACAAA
TGA

Translation (630 aa):
MSRSGDRTSTFDPSHSDNLLHGLNLLWRKQLFCDVTLTAQGQQFHCHKAVLASCSQYFRSLFSSHPPLGG
GVGGQDGLGAPKDQQQQQQPQQQPPQQQQPPPQEEPGTPSSSPDDKLLTSPRAINNLVLQGCSSIGLRLV
LEYLYTANVTLSLDTVEEVLSVSKILHIPQVTKLCVQFLNDQISVQNYKQVCKIAALHGLEETKKLANKY
LVEDVLLLNFEEMRALLDSLPPPVESELALFQMSVLWLEHDRETRMQYAPDLMKRLRFALIPAPELVERV
QSVDFMRTDPVCQKLLLDAMNYHLMPFRQHCRQSLASRIRSNKKMLLLVGGLPPGPDRLPSNLVQYYDDE
KKTWKILTIMPYNSAHHCVVEVENFLFVLGGEDQWNPNGKHSTNFVSRYDPRFNSWIQLPPMQERRASFY
ACRLDKHLYVIGGRNETGYLSSVECYNLDTNEWRYVSSLPQPLAAHAGAVHNGKIYISGGVHNGEYVPWL
YCYDPVMDVWARKQDMNTKRAIHTLAVMNDRLYAIGGNHLKGFSHLDVMLVECYDPKGDQWNILQTPILE
GRSGPGCAVLDDSIYLVGGYSWSMGAYKSSTICYCPEKGTWTELEGDVAEPLAGPACATVILPACVPYNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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