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Report for CCDS37670.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37670.1 Public Mus musculus 17 C3 23 108 98 CCDS HistoryNCBI Gene:12266Re-query CCDS DB by CCDS ID:37670.1Re-query CCDS DB by GeneID:12266See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37670.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024988.14 ENSMUSP00000024988.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024988.14Link to Ensembl Protein Viewer:ENSMUSP00000024988.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000024988Re-query CCDS DB by Protein ID:ENSMUSP00000024988
Original member Current member NCBI NM_009778.3 NP_033908.2 Accepted alive Link to Nucleotide Sequence:NM_009778.3Link to Protein Sequence:NP_033908.2Re-query CCDS DB by Nucleotide ID:NM_009778Re-query CCDS DB by Protein ID:NP_033908Link to BLAST:NP_033908.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033908.2 1663 P01027-1 1663 100% 0 0

Chromosomal Locations for CCDS 37670.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 57204013 57204154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57204251 57204386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57204467 57204550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57205297 57205380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57205656 57205745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57206190 57206295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57207334 57207423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57207532 57207619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57209239 57209290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57209411 57209501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57209589 57209648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57210165 57210323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57211572 57211735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57212605 57212761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57213766 57213864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57214676 57214835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57215114 57215189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57215729 57215932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57217085 57217171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57217266 57217332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57218459 57218671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57218798 57218940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57219540 57219625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57220094 57220202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57220973 57221173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57221323 57221394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57221889 57222018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57222196 57222351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57222789 57222995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57223121 57223330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57223831 57223977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57224063 57224178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57224287 57224413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57224644 57224746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57224853 57224943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57225035 57225117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57225216 57225310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57225997 57226067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57226166 57226331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57226693 57226882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57227956 57228035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4992 nt):
ATGGGACCAGCTTCAGGGTCCCAGCTACTAGTGCTACTGCTGCTGTTGGCCAGCTCCCCATTAGCTCTGG
GGATCCCCATGTATTCCATCATTACTCCCAATGTCCTACGGCTGGAGAGCGAAGAGACCATCGTACTGGA
GGCCCACGATGCTCAGGGTGACATCCCAGTCACAGTCACTGTGCAAGACTTCCTAAAGAGGCAAGTGCTG
ACCAGTGAGAAGACAGTGTTGACAGGAGCCAGTGGACATCTGAGAAGCGTCTCCATCAAGATTCCAGCCA
GTAAGGAATTCAACTCAGATAAGGAGGGGCACAAGTACGTGACAGTGGTGGCAAACTTCGGGGAAACGGT
GGTGGAGAAAGCAGTGATGGTAAGCTTCCAGAGTGGGTACCTCTTCATCCAGACAGACAAGACCATCTAC
ACCCCTGGCTCCACTGTCTTATATCGGATCTTCACTGTGGACAACAACCTACTGCCCGTGGGCAAGACAG
TCGTCATCCTCATTGAGACCCCCGATGGCATTCCTGTCAAGAGAGACATTCTGTCTTCCAACAACCAACA
CGGCATCTTGCCTTTGTCTTGGAACATTCCTGAACTGGTCAACATGGGGCAGTGGAAGATCCGAGCCTTT
TACGAACATGCGCCGAAGCAGATCTTCTCCGCAGAGTTTGAGGTGAAGGAATACGTGCTGCCCAGTTTTG
AGGTCCGGGTGGAGCCCACAGAGACATTTTATTACATCGATGACCCAAATGGCCTGGAAGTTTCCATCAT
AGCCAAGTTCCTGTACGGGAAAAACGTGGACGGGACAGCCTTCGTGATTTTTGGGGTCCAGGATGGCGAT
AAGAAGATTTCTCTGGCCCACTCCCTCACGCGCGTAGTGATTGAGGATGGTGTGGGGGATGCAGTGCTGA
CCCGGAAGGTGCTGATGGAGGGGGTACGGCCTTCCAACGCCGACGCCCTGGTGGGGAAGTCCCTGTATGT
CTCCGTCACTGTCATCCTGCACTCAGGTAGTGACATGGTAGAGGCAGAGCGCAGTGGGATCCCGATTGTC
ACTTCCCCGTACCAGATCCACTTCACCAAGACACCCAAATTCTTCAAGCCAGCCATGCCCTTTGACCTCA
TGGTGTTCGTGACCAACCCCGATGGCTCTCCGGCCAGCAAAGTGCTGGTGGTCACTCAGGGATCTAATGC
AAAGGCTCTCACCCAAGATGATGGCGTGGCCAAGCTAAGCATCAACACACCCAACAGCCGCCAACCCCTG
ACCATCACAGTCCGCACCAAGAAGGACACTCTCCCAGAATCACGGCAGGCCACCAAGACAATGGAGGCCC
ATCCCTACAGCACTATGCACAACTCCAACAACTACCTACACTTGTCAGTGTCACGAATGGAGCTCAAGCC
GGGGGACAACCTCAATGTCAACTTCCACCTGCGCACAGACCCAGGCCATGAGGCCAAGATCCGATACTAC
ACCTACCTGGTTATGAACAAGGGGAAGCTCCTGAAGGCAGGCCGCCAGGTTCGGGAGCCTGGCCAGGACC
TGGTGGTCTTGTCCCTGCCCATCACTCCAGAGTTTATTCCTTCATTTCGCCTGGTGGCTTACTACACCCT
GATTGGAGCTAGTGGCCAGAGGGAGGTGGTGGCTGACTCTGTGTGGGTGGATGTGAAGGATTCCTGTATT
GGCACGCTGGTGGTGAAGGGTGACCCAAGAGATAACCATCTCGCACCTGGGCAACAAACGACACTCAGGA
TTGAAGGAAACCAGGGGGCCCGAGTGGGGCTAGTGGCTGTGGACAAGGGAGTGTTTGTGCTGAACAAGAA
GAACAAACTCACACAGAGCAAGATCTGGGATGTGGTAGAGAAGGCAGACATTGGCTGCACCCCAGGCAGT
GGGAAGAACTATGCTGGTGTCTTCATGGATGCAGGCCTGGCCTTCAAGACAAGCCAAGGACTGCAGACTG
AACAGAGAGCAGATCTTGAGTGCACCAAGCCAGCAGCCCGCCGCCGTCGCTCAGTACAGTTGATGGAAAG
AAGGATGGACAAAGCTGGTCAGTACACTGACAAGGGTCTTCGGAAGTGTTGTGAGGATGGTATGCGGGAT
ATCCCTATGAGATACAGCTGCCAGCGCCGGGCACGCCTCATCACCCAGGGCGAGAACTGCATAAAGGCCT
TCATAGACTGCTGCAACCACATCACCAAGCTGCGTGAACAACACAGAAGAGACCACGTGCTGGGCCTGGC
CAGGAGTGAATTGGAGGAAGACATAATTCCAGAAGAAGATATTATCTCTAGAAGCCACTTCCCACAGAGC
TGGTTGTGGACCATAGAAGAGTTGAAAGAACCAGAGAAAAATGGAATCTCTACGAAGGTCATGAACATCT
TTCTCAAAGATTCCATCACCACCTGGGAGATTCTGGCAGTGAGCTTGTCAGACAAGAAAGGGATCTGTGT
GGCAGACCCCTATGAGATCAGAGTGATGCAGGACTTCTTCATTGACCTGCGGCTGCCCTACTCTGTAGTG
CGCAACGAACAGGTGGAGATCAGAGCTGTGCTCTTCAACTACCGTGAACAGGAGGAACTTAAGGTGAGGG
TGGAACTGTTGCATAATCCAGCCTTCTGCAGCATGGCCACCGCCAAGAATCGCTACTTCCAGACCATCAA
AATCCCTCCCAAGTCCTCGGTGGCTGTACCGTATGTCATTGTCCCCTTGAAGATCGGCCAACAAGAGGTG
GAGGTCAAGGCTGCTGTCTTCAATCACTTCATCAGTGATGGTGTCAAGAAGACACTGAAGGTCGTGCCAG
AAGGAATGAGAATCAACAAAACTGTGGCCATCCATACACTGGACCCAGAGAAGCTCGGTCAAGGGGGAGT
GCAGAAGGTGGATGTGCCTGCCGCAGACCTTAGCGACCAAGTGCCAGACACAGACTCTGAGACCAGAATT
ATCCTGCAAGGGAGCCCGGTGGTTCAGATGGCTGAAGATGCTGTGGACGGGGAGCGGCTGAAACACCTGA
TCGTGACCCCCGCAGGCTGTGGGGAACAGAACATGATTGGCATGACACCAACAGTCATTGCGGTACACTA
CCTGGACCAGACCGAACAGTGGGAGAAGTTCGGCATAGAGAAGAGGCAAGAGGCCCTGGAGCTCATCAAG
AAAGGGTACACCCAGCAGCTGGCCTTCAAACAGCCCAGCTCTGCCTATGCTGCCTTCAACAACCGGCCCC
CCAGCACCTGGCTGACAGCCTACGTGGTCAAGGTCTTCTCTCTAGCTGCCAACCTCATCGCCATCGACTC
TCACGTCCTGTGTGGGGCTGTTAAATGGTTGATTCTGGAGAAACAGAAGCCGGATGGTGTCTTTCAGGAG
GATGGGCCCGTGATTCACCAAGAAATGATTGGTGGCTTCCGGAACGCCAAGGAGGCAGATGTGTCACTCA
CAGCCTTCGTCCTCATCGCACTGCAGGAAGCCAGGGACATCTGTGAGGGGCAGGTCAATAGCCTTCCTGG
GAGCATCAACAAGGCAGGGGAGTATATTGAAGCCAGTTACATGAACCTGCAGAGACCATACACAGTGGCC
ATTGCTGGGTATGCCCTGGCCCTGATGAACAAACTGGAGGAACCTTACCTCGGCAAGTTTCTGAACACAG
CCAAAGATCGGAACCGCTGGGAGGAGCCTGACCAGCAGCTCTACAACGTAGAGGCCACATCCTACGCCCT
CCTGGCCCTGCTGCTGCTGAAAGACTTTGACTCTGTGCCCCCTGTAGTGCGCTGGCTCAATGAGCAAAGA
TACTACGGAGGCGGCTATGGCTCCACCCAGGCTACCTTCATGGTATTCCAAGCCTTGGCCCAATATCAAA
CAGATGTCCCTGACCATAAGGACTTGAACATGGATGTGTCCTTCCACCTCCCCAGCCGTAGCTCTGCAAC
CACGTTTCGCCTGCTCTGGGAAAATGGCAACCTCCTGCGATCGGAAGAGACCAAGCAAAATGAGGCCTTC
TCTCTAACAGCCAAAGGAAAAGGCCGAGGCACATTGTCGGTGGTGGCAGTGTATCATGCCAAACTCAAAA
GCAAAGTCACCTGCAAGAAGTTTGACCTCAGGGTCAGCATAAGACCAGCCCCTGAGACAGCCAAGAAGCC
CGAGGAAGCCAAGAATACCATGTTCCTTGAAATCTGCACCAAGTACTTGGGAGATGTGGACGCCACTATG
TCCATCCTGGACATCTCCATGATGACTGGCTTTGCTCCAGACACAAAGGACCTGGAACTGCTGGCCTCTG
GAGTAGATAGATACATCTCCAAGTACGAGATGAACAAAGCCTTCTCCAACAAGAACACCCTCATCATCTA
CCTAGAAAAGATTTCACACACCGAAGAAGACTGCCTGACCTTCAAAGTTCACCAGTACTTTAATGTGGGA
CTTATCCAGCCCGGGTCGGTCAAGGTCTACTCCTATTACAACCTCGAGGAATCATGCACCCGGTTCTATC
ATCCAGAGAAGGACGATGGGATGCTCAGCAAGCTGTGCCACAGTGAAATGTGCCGGTGTGCTGAAGAGAA
CTGCTTCATGCAACAGTCACAGGAGAAGATCAACCTGAATGTCCGGCTAGACAAGGCTTGTGAGCCCGGA
GTCGACTATGTGTACAAGACCGAGCTAACCAACATAGAGCTGTTGGATGATTTTGATGAGTACACCATGA
CCATCCAGCAGGTCATCAAGTCAGGCTCAGATGAGGTGCAGGCAGGGCAGCAACGCAAGTTCATCAGCCA
CATCAAGTGCAGAAACGCCCTGAAGCTGCAGAAAGGGAAGAAGTACCTCATGTGGGGCCTCTCCTCTGAC
CTCTGGGGAGAAAAGCCCAACACCAGCTACATCATTGGGAAGGACACGTGGGTGGAGCACTGGCCTGAGG
CAGAAGAATGCCAGGATCAGAAGTACCAGAAACAGTGCGAAGAACTTGGGGCATTCACAGAATCTATGGT
GGTTTATGGTTGTCCCAACTGA

Translation (1663 aa):
MGPASGSQLLVLLLLLASSPLALGIPMYSIITPNVLRLESEETIVLEAHDAQGDIPVTVTVQDFLKRQVL
TSEKTVLTGASGHLRSVSIKIPASKEFNSDKEGHKYVTVVANFGETVVEKAVMVSFQSGYLFIQTDKTIY
TPGSTVLYRIFTVDNNLLPVGKTVVILIETPDGIPVKRDILSSNNQHGILPLSWNIPELVNMGQWKIRAF
YEHAPKQIFSAEFEVKEYVLPSFEVRVEPTETFYYIDDPNGLEVSIIAKFLYGKNVDGTAFVIFGVQDGD
KKISLAHSLTRVVIEDGVGDAVLTRKVLMEGVRPSNADALVGKSLYVSVTVILHSGSDMVEAERSGIPIV
TSPYQIHFTKTPKFFKPAMPFDLMVFVTNPDGSPASKVLVVTQGSNAKALTQDDGVAKLSINTPNSRQPL
TITVRTKKDTLPESRQATKTMEAHPYSTMHNSNNYLHLSVSRMELKPGDNLNVNFHLRTDPGHEAKIRYY
TYLVMNKGKLLKAGRQVREPGQDLVVLSLPITPEFIPSFRLVAYYTLIGASGQREVVADSVWVDVKDSCI
GTLVVKGDPRDNHLAPGQQTTLRIEGNQGARVGLVAVDKGVFVLNKKNKLTQSKIWDVVEKADIGCTPGS
GKNYAGVFMDAGLAFKTSQGLQTEQRADLECTKPAARRRRSVQLMERRMDKAGQYTDKGLRKCCEDGMRD
IPMRYSCQRRARLITQGENCIKAFIDCCNHITKLREQHRRDHVLGLARSELEEDIIPEEDIISRSHFPQS
WLWTIEELKEPEKNGISTKVMNIFLKDSITTWEILAVSLSDKKGICVADPYEIRVMQDFFIDLRLPYSVV
RNEQVEIRAVLFNYREQEELKVRVELLHNPAFCSMATAKNRYFQTIKIPPKSSVAVPYVIVPLKIGQQEV
EVKAAVFNHFISDGVKKTLKVVPEGMRINKTVAIHTLDPEKLGQGGVQKVDVPAADLSDQVPDTDSETRI
ILQGSPVVQMAEDAVDGERLKHLIVTPAGCGEQNMIGMTPTVIAVHYLDQTEQWEKFGIEKRQEALELIK
KGYTQQLAFKQPSSAYAAFNNRPPSTWLTAYVVKVFSLAANLIAIDSHVLCGAVKWLILEKQKPDGVFQE
DGPVIHQEMIGGFRNAKEADVSLTAFVLIALQEARDICEGQVNSLPGSINKAGEYIEASYMNLQRPYTVA
IAGYALALMNKLEEPYLGKFLNTAKDRNRWEEPDQQLYNVEATSYALLALLLLKDFDSVPPVVRWLNEQR
YYGGGYGSTQATFMVFQALAQYQTDVPDHKDLNMDVSFHLPSRSSATTFRLLWENGNLLRSEETKQNEAF
SLTAKGKGRGTLSVVAVYHAKLKSKVTCKKFDLRVSIRPAPETAKKPEEAKNTMFLEICTKYLGDVDATM
SILDISMMTGFAPDTKDLELLASGVDRYISKYEMNKAFSNKNTLIIYLEKISHTEEDCLTFKVHQYFNVG
LIQPGSVKVYSYYNLEESCTRFYHPEKDDGMLSKLCHSEMCRCAEENCFMQQSQEKINLNVRLDKACEPG
VDYVYKTELTNIELLDDFDEYTMTIQQVIKSGSDEVQAGQQRKFISHIKCRNALKLQKGKKYLMWGLSSD
LWGEKPNTSYIIGKDTWVEHWPEAEECQDQKYQKQCEELGAFTESMVVYGCPN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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