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Report for CCDS37558.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37558.1 Public Mus musculus 17 Cyp4f37 23 108 98 CCDS HistoryNCBI Gene:677156Re-query CCDS DB by CCDS ID:37558.1Re-query CCDS DB by GeneID:677156See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 37558.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077639.6 ENSMUSP00000076827.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077639.6Link to Ensembl Protein Viewer:ENSMUSP00000076827.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000077639Re-query CCDS DB by Protein ID:ENSMUSP00000076827
Original member Current member NCBI NM_001100187.1 NP_001093657.1 Accepted alive Link to Nucleotide Sequence:NM_001100187.1Link to Protein Sequence:NP_001093657.1Re-query CCDS DB by Nucleotide ID:NM_001100187Re-query CCDS DB by Protein ID:NP_001093657Link to BLAST:NP_001093657.1

Chromosomal Locations for CCDS 37558.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 32621695 32621892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32625122 32625266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32627597 32627650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32627738 32627865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32629035 32629156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32629807 32630077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32631299 32631365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32631560 32631689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32634179 32634312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32634429 32634493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32634658 32634740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32634976 32635219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1641 nt):
ATGCTGCGGCTAAGTGTGTCTGGGCTGGACCTGGGCTCTGTGGTGACCTTGTCATGGCATCTTCTGCTGC
TTGGAGCGGCATCTTGGATTTTGGCCAGAATCCTTGCCTGGACTTACTCATTCTGTGAGAACTGCTCCCG
CCTCAGATGTTTCCCTCAGCCTCCTAAAAGAAACTGGTTTTTGGGTCACTTGGGCATGATTGAGCACAAT
GAGGAAGGCATGCAGCTGATGACTGAAGCAGGCCAGACTTACCGAGATGTCCATCTCTGTTGGCTGGGAC
CAGTGATCCCTGTGCTGAGGATTGTTGACCCTGCATTTGTTGCCCCCCTGCTCCTGGCCTCAGCTTTGGT
GGCCCCAAAGGACACGACTTTCCATACCTTTGTGAAGCCCTGGCTGGGGGATGGGCTCTTCCTGAATTCA
GGTGACAAGTGGAGCCGCCATCGCCGTCTGCTGACACCTGCCTTCCACTTTGACATCCTGAAGCCCTATG
TGAAGATATTTAACCAGAGTGTGAACATCATGCACGCCAAGTGGAAGCACCTATCCTCGGAAGGCAGTGC
ACGTCTGGAAATGTTTGAGCACATCAGCCTCATGACCTTGGACAGTCTGCAGAAATGCCTCTTTGGCTTT
GACAGCAACTGTCAGGAGTCTCCCAGTGAATACATTTCTGCCATCTTGGAACTCAGCTCCCTCGTAATAA
AAAGGTCACATCAGCTCTTCTTGTTCGTGGACTTCCTGTATTACCACACTGCTGATGGGCGGCGCTTCCG
CAAGGCCTGTGACCTGGTGCACAACTTCACAGATGCTGTCATTAGGGAGAGACGGCACACTCTCTCCAGC
CAAAACCATGATGAGTTCTTGAAGTCCAAGACTAAGTCTAAGACTCTGGACTTCATTGACGTTCTCTTGT
TGGCCAAGGATGAACATGGAAAGGAGCTGTCAGATGAGGACATCCGGGCAGAGGCTGACACCTTTATGTT
TGGAGGCCATGACACGACAGCCAGTGCACTCTCCTGGATCCTGTACAACCTGGCGAGGCACCCCGAATAC
CAGGAGCGCTGCCGGCAGGAGGTTCAGGAGCTGCTGAGGGGCCGAGAGCCCCAGGAGATTGAATGGGACG
ACCTGGCCCAGCTACCCTTCCTGACCATGTGCATCAAGGAGAGTCTGCGGCTGCATCCCCCAGTCATAGA
TCTCCTCCGCCGCTGCACCCGGGACATTGTGCTACCTGATGGCCGGGTCATCCCTAAAGGGAACATCTGT
GTCATCAGCATCTTTGGTATTCATCACAATCCATCAGTCTGGCCAGACCCTGAGGTCTATGACCCCTTCC
GCTTTGACCCAGAAAACGCACACAAGAGGCCTCCTCTGGCTTTTATTCCCTTTTCTGCCGGGCCCAGGAA
CTGCATAGGACAGACTTTCGCTATGAATGAGATGATGGTGGCACTGGCGTTGACTCTGCTGCGCTTCCGC
ATCCTGCCGGATGACAAGGAGCCGCGCCGGAAGCCAGAGATAATCCTGCGGGCGGAGGGCGGGTTGTGGC
TGCGGGTGGAGCCGCTGAGCACAGTGCTGAAGGACTCCAAACCTGACCTTGAGGCTTCTTTACCCCACCC
TCCAATTGTTCTCTCCGGTTCTCAGAATTAG

Translation (546 aa):
MLRLSVSGLDLGSVVTLSWHLLLLGAASWILARILAWTYSFCENCSRLRCFPQPPKRNWFLGHLGMIEHN
EEGMQLMTEAGQTYRDVHLCWLGPVIPVLRIVDPAFVAPLLLASALVAPKDTTFHTFVKPWLGDGLFLNS
GDKWSRHRRLLTPAFHFDILKPYVKIFNQSVNIMHAKWKHLSSEGSARLEMFEHISLMTLDSLQKCLFGF
DSNCQESPSEYISAILELSSLVIKRSHQLFLFVDFLYYHTADGRRFRKACDLVHNFTDAVIRERRHTLSS
QNHDEFLKSKTKSKTLDFIDVLLLAKDEHGKELSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEY
QERCRQEVQELLRGREPQEIEWDDLAQLPFLTMCIKESLRLHPPVIDLLRRCTRDIVLPDGRVIPKGNIC
VISIFGIHHNPSVWPDPEVYDPFRFDPENAHKRPPLAFIPFSAGPRNCIGQTFAMNEMMVALALTLLRFR
ILPDDKEPRRKPEIILRAEGGLWLRVEPLSTVLKDSKPDLEASLPHPPIVLSGSQN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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