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Report for CCDS3749.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3749.1 Public Homo sapiens 4 MGST2 24 110 108 CCDS HistoryNCBI Gene:4258Re-query CCDS DB by CCDS ID:3749.1Re-query CCDS DB by GeneID:4258See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3749.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265498.6 ENSP00000265498.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000265498.6Link to Ensembl Protein Viewer:ENSP00000265498.1Re-query CCDS DB by Nucleotide ID:ENST00000265498Re-query CCDS DB by Protein ID:ENSP00000265498
Original member Current member EBI ENST00000503816.1 ENSP00000423008.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000503816.1Link to Ensembl Protein Viewer:ENSP00000423008.1Re-query CCDS DB by Nucleotide ID:ENST00000503816Re-query CCDS DB by Protein ID:ENSP00000423008
Original member Current member EBI ENST00000616265.4 ENSP00000482639.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616265.4Link to Ensembl Protein Viewer:ENSP00000482639.1Re-query CCDS DB by Nucleotide ID:ENST00000616265Re-query CCDS DB by Protein ID:ENSP00000482639
Original member Current member NCBI NM_001204366.2 NP_001191295.1 Accepted alive Link to Nucleotide Sequence:NM_001204366.2Link to Protein Sequence:NP_001191295.1Re-query CCDS DB by Nucleotide ID:NM_001204366Re-query CCDS DB by Protein ID:NP_001191295Link to BLAST:NP_001191295.1
Original member Current member NCBI NM_002413.5 NP_002404.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002413.5Link to Protein Sequence:NP_002404.1Re-query CCDS DB by Nucleotide ID:NM_002413Re-query CCDS DB by Protein ID:NP_002404Link to BLAST:NP_002404.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191295.1 147 Q99735-1 147 100% 0 0
NP_002404.1 147 Q99735-1 147 100% 0 0

Chromosomal Locations for CCDS 3749.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 139666020 139666077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139678543 139678642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139695197 139695267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139703455 139703536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 139704016 139704148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGGCCGGGAACTCGATCCTGCTGGCTGCTGTCTCTATTCTCTCGGCCTGTCAGCAAAGTTATTTTGCTT
TGCAAGTTGGAAAGGCAAGATTAAAATACAAAGTTACGCCCCCAGCAGTCACTGGGTCACCAGAGTTTGA
GAGAGTATTTCGGGCACAACAAAACTGTGTGGAGTTTTATCCTATATTCATAATTACATTGTGGATGGCT
GGGTGGTATTTCAACCAAGTTTTTGCTACTTGTCTGGGTCTGGTGTACATATATGGCCGTCACCTATACT
TCTGGGGATATTCAGAAGCTGCTAAAAAACGGATCACCGGTTTCCGACTGAGTCTGGGGATTTTGGCCTT
GTTGACCCTCCTAGGTGCCCTGGGAATTGCAAACAGCTTTCTGGATGAATATCTGGACCTCAATATTGCC
AAGAAACTGAGGCGGCAATTCTAA

Translation (147 aa):
MAGNSILLAAVSILSACQQSYFALQVGKARLKYKVTPPAVTGSPEFERVFRAQQNCVEFYPIFIITLWMA
GWYFNQVFATCLGLVYIYGRHLYFWGYSEAAKKRITGFRLSLGILALLTLLGALGIANSFLDEYLDLNIA
KKLRRQF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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