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Report for CCDS37459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37459.1 Public Mus musculus 17 Has1 23 108 98 CCDS HistoryNCBI Gene:15116Re-query CCDS DB by CCDS ID:37459.1Re-query CCDS DB by GeneID:15116See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37459.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003762.7 ENSMUSP00000003762.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003762.7Link to Ensembl Protein Viewer:ENSMUSP00000003762.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000003762Re-query CCDS DB by Protein ID:ENSMUSP00000003762
Original member Current member NCBI NM_008215.2 NP_032241.1 Accepted alive Link to Nucleotide Sequence:NM_008215.2Link to Protein Sequence:NP_032241.1Re-query CCDS DB by Nucleotide ID:NM_008215Re-query CCDS DB by Protein ID:NP_032241Link to BLAST:NP_032241.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032241.1 583 Q61647 583 100% 0 0

Chromosomal Locations for CCDS 37459.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 17843624 17844299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17847551 17847683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17848148 17848373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17849941 17850648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17855138 17855146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1752 nt):
ATGAGACAGGACATGCCAAAGCCCTCAGAGGCAGCGCGTTGCTGCTCTGGCCTGGCCAGGCGAGCACTCA
CGATCATCTTTGCCCTGCTCATCCTGGGCCTCATGACCTGGGCCTACGCCGCAGGCGTTCCTCTGGCTTC
AGATCGCTATGGACTCCTGGCCTTTGGCCTCTATGGGGCATTCCTCAGCGCACACCTAGTGGCACAGAGC
CTCTTCGCTTACCTGGAGCACCGAAGGGTGGCAGCGGCTGCGCGGCGCTCCTTGGCGAAGGGGCCCCTGG
ATGCGGCCACTGCACGCAGCGTGGCACTCACCATCTCAGCCTACCAAGAGGATCCCGCTTACCTGCGCCA
GTGCTTGACCTCCGCGCGCGCCTTGCTGTACCCGCACACGAGGTTACGCGTGCTCATGGTGGTGGACGGC
AACCGCGCTGAGGATCTGTACATGGTGGACATGTTCCGAGAAGTCTTCGCCGATGAGGACCCCGCCACTT
ATGTGTGGGATGGCAACTACCATCAGCCCTGGGAACCAGCGGAGGCTACGGGCGCTGTCGGTGAAGGTGC
CTACCGGGAGGTGGAGGCGGAGGACCCCGGGCGGTTGGCGGTGGAGGCGCTGGTGAGAACACGCAGGTGC
GTGTGCGTGGCTCAGCGTTGGGGCGGCAAACGTGAGGTCATGTACACAGCTTTCAAGGCACTGGGCGACT
CCGTGGACTACGTGCAGGTCTGTGACTCAGACACAAGACTAGACCCCATGGCACTGCTGGAGCTTGTGCG
AGTGTTGGATGAAGACCCCCGGGTAGGGGCTGTTGGAGGGGATGTGAGGATCCTTAACCCTCTGGACTCC
TGGGTCAGCTTCTTGAGCAGTCTTCGATACTGGGTAGCCTTCAATGTGGAACGAGCTTGTCAGAGCTACT
TCCACTGTGTGTCCTGCATCAGTGGTCCTCTGGGTCTATACAGAAACAATCTCCTGCAGCAGTTCTTGGA
GGCCTGGTACAACCAAAAGTTCCTGGGCACCCACTGCACATTTGGGGATGACAGGCACCTCACCAACCGA
ATGCTTAGCATGGGCTATGCTACCAAGTATACCTCGCGCTCCAGATGCTACTCGGAGACGCCCTCCTCCT
TCCTTCGTTGGTTGAGCCAACAGACCCGCTGGTCCAAATCTTACTTCCGAGAGTGGCTATACAATGCTCT
GTGGTGGCATCGCCACCACGCATGGATGACCTATGAAGCGGTGGTCTCGGGCCTCTTCCCTTTCTTCGTG
GCTGCCACGGTGTTGAGGCTCTTCTATGCAGGGCGCCCGTGGGCTCTGCTCTGGGTGCTGCTCTGTGTGC
AGGGCGTAGCACTGGCAAAGGCAGCCTTTGCAGCCTGGCTGCGTGGCTGCGTGCGCATGGTGCTGCTGTC
ACTCTATGCACCACTCTACATGTGCGGCCTCCTGCCTGCCAAATTCCTAGCGTTGGTTACCATGAATCAA
AGTGGTTGGGGTACCTCGGGCCGGAAGAAACTGGCTGCTAACTACGTCCCCGTGTTGCCCCTGGCACTCT
GGGCTCTACTGCTGCTTGGAGGCCTGGCCCGCAGTGTGGCCCAGGAGGCCAGAGCTGACTGGAGTGGCCC
ATCCCGAGCAGCTGAAGCCTACCACCTTGCTGCTGGGGCTGGTGCCTATGTGGCCTACTGGGTGGTAATG
TTAACTATCTACTGGGTAGGTGTGAGGAGGCTGTGCAGACGTCGGAGCGGTGGTTACCGTGTCCAAGTAT
GA

Translation (583 aa):
MRQDMPKPSEAARCCSGLARRALTIIFALLILGLMTWAYAAGVPLASDRYGLLAFGLYGAFLSAHLVAQS
LFAYLEHRRVAAAARRSLAKGPLDAATARSVALTISAYQEDPAYLRQCLTSARALLYPHTRLRVLMVVDG
NRAEDLYMVDMFREVFADEDPATYVWDGNYHQPWEPAEATGAVGEGAYREVEAEDPGRLAVEALVRTRRC
VCVAQRWGGKREVMYTAFKALGDSVDYVQVCDSDTRLDPMALLELVRVLDEDPRVGAVGGDVRILNPLDS
WVSFLSSLRYWVAFNVERACQSYFHCVSCISGPLGLYRNNLLQQFLEAWYNQKFLGTHCTFGDDRHLTNR
MLSMGYATKYTSRSRCYSETPSSFLRWLSQQTRWSKSYFREWLYNALWWHRHHAWMTYEAVVSGLFPFFV
AATVLRLFYAGRPWALLWVLLCVQGVALAKAAFAAWLRGCVRMVLLSLYAPLYMCGLLPAKFLALVTMNQ
SGWGTSGRKKLAANYVPVLPLALWALLLLGGLARSVAQEARADWSGPSRAAEAYHLAAGAGAYVAYWVVM
LTIYWVGVRRLCRRRSGGYRVQV


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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