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Report for CCDS37369.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37369.1 Public Mus musculus 16 Or5ac19 23 108 98 CCDS HistoryNCBI Gene:258996Re-query CCDS DB by CCDS ID:37369.1Re-query CCDS DB by GeneID:258996See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37369.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099656.1 ENSMUSP00000097248.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099656.1Link to Ensembl Protein Viewer:ENSMUSP00000097248.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000099656Re-query CCDS DB by Protein ID:ENSMUSP00000097248
Original member Current member EBI ENSMUST00000216834.1 ENSMUSP00000150660.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216834.1Link to Ensembl Protein Viewer:ENSMUSP00000150660.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216834Re-query CCDS DB by Protein ID:ENSMUSP00000150660
Original member Current member NCBI NM_146994.2 NP_667205.2 Accepted alive Link to Nucleotide Sequence:NM_146994.2Link to Protein Sequence:NP_667205.2Re-query CCDS DB by Nucleotide ID:NM_146994Re-query CCDS DB by Protein ID:NP_667205Link to BLAST:NP_667205.2

Chromosomal Locations for CCDS 37369.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 59268739 59269665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGGCAGAAGGAAACCGCACTCTGGTCACTGAGTTTATCCTCATGGGACTCACCGACCATCCCACGCTAA
AGGCTGCCCTGTTCCCACTGTTCCTTGTCATCTACCTCATCACCATGGTGGGAAATCTCGGACTGATTGC
TCTCATCTGGAAGGACTCTCACCTCCACACCCCTATGTACTTATTCCTCAGTAGCCTGGCCTTTGCTGAC
TCATGCACTACATCCTCTGTGACTCCCAGAATGATTCTCAACTTTTTATCTACAAATCATGAGATAACCC
TGGTTGAGTGCTTTGCTCAATTTTATTTTATGGGTTCCAGTGCAACCACGGAATGCTTTCTCCTATCTGT
GATGGCCTATGACCGCTATCTGGCCATCTGTAACCCCTTGCTTTATCCAGTGTTGATGTCTAATAGACTC
TGTACTCAGTTTATAGCCGTGACATACTTACTTGGTGTTCTGCACTTGGCAATTCACGTGGGTTTGTTAC
TTAGACTGACTTTCTGCAGATCCAACATTATACAATATTACTATTGTGAAATTTTACAACTTTTCAACAT
TTCTTGCACTGATCCAACAATTAACGTGTTTGTGCTTTTAATCTTTTCAATTTCTATACAAGCCTTCACC
TTTGTAACCATCTTGGTTTCATATATCCGTGTCCTCTTTGCCATCCTGAGAAAGAAGTCTGAAAAGGGCA
GAAGCAAAGCCTTCTCTACATGCAGTGCCCATCTACTCTCTGTCTCTTTGTTCTATGGAACTCTTTTTCT
CATTTATGTTTGTCCTGGGTCTGGGCCTGTGGGAGACAAAGAAAAAATGCTTTCTTTATTTTATACAGTC
ATAATTCCTCTGCTCAACCCATTTGTTTACAGTCTGAGAAACAAAGAGGTTATAAGTGCTTTTAGAAGAG
TAATGAAGAACACCTGA

Translation (308 aa):
MAEGNRTLVTEFILMGLTDHPTLKAALFPLFLVIYLITMVGNLGLIALIWKDSHLHTPMYLFLSSLAFAD
SCTTSSVTPRMILNFLSTNHEITLVECFAQFYFMGSSATTECFLLSVMAYDRYLAICNPLLYPVLMSNRL
CTQFIAVTYLLGVLHLAIHVGLLLRLTFCRSNIIQYYYCEILQLFNISCTDPTINVFVLLIFSISIQAFT
FVTILVSYIRVLFAILRKKSEKGRSKAFSTCSAHLLSVSLFYGTLFLIYVCPGSGPVGDKEKMLSLFYTV
IIPLLNPFVYSLRNKEVISAFRRVMKNT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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