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Report for CCDS37325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37325.1 Public Mus musculus 16 Dtx3l 23 108 98 CCDS HistoryNCBI Gene:209200Re-query CCDS DB by CCDS ID:37325.1Re-query CCDS DB by GeneID:209200See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37325.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081933.13 ENSMUSP00000080601.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081933.13Link to Ensembl Protein Viewer:ENSMUSP00000080601.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000081933Re-query CCDS DB by Protein ID:ENSMUSP00000080601
Original member Current member NCBI NM_001013371.2 NP_001013389.2 Accepted alive Link to Nucleotide Sequence:NM_001013371.2Link to Protein Sequence:NP_001013389.2Re-query CCDS DB by Nucleotide ID:NM_001013371Re-query CCDS DB by Protein ID:NP_001013389Link to BLAST:NP_001013389.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013389.2 748 Q3UIR3-1 748 100% 0 0

Chromosomal Locations for CCDS 37325.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 35929299 35929368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 35931373 35931590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 35932276 35933799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 35936377 35936627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 35938694 35938877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2247 nt):
ATGGCTTCCAGTCCCGACCCGCCGTCCCCGCTACTCGTACGGCTGCGGGAGTCCATCCCCAAGGCGCACA
GGAAGCTCGAGATATACTTCCAGAGCCGGGCCTCGGGAGGTGGGGAGTGCTCTGTCCAGCCCGTGGGCCC
CAGCGCCCCGGACACCTACGAGGTGAAGTTCCTAAAAAAAGCAGATAAGGAGAAAGTGTTGAAAAAGAGC
GAACACGAGATGTTGGTCCATAACAAACCTGTGACCATTGTCCTGGAAACTACTAAAAAGCCAGTAGAGG
ACCTGAGACCCAGACTCCCATCCTTGACACAGCCAGTGGAGACACCAAGCTCCAGACCTCCGTCCTTGAC
GGGGTCTCTGGATGAAGCACTTTGTGATGACATACATCCCCAGGACGGGCTCGTTTCTAACTCTGTTGAC
TCAGTTGTCCAAAAGATCTTTCTTGCTGTGACCGCTGAGCTGAACTGTGACCTGCTCTCTAAAGAGCAGA
GAGCATCTATAACCACTGTCTGCCCTCACATCATCAAAAGCATGGAGGGTAGTGATGGAATTAAGAAGGT
GTGTGGCAACTTCAAAGATATTGAAAAGATACATCACTTCTTGAGTGAGCAGCTTTTGGAACGGGAGCAG
AAACGGAAGGGAAGCGAGCAGAAACGGAAGTGCGCCCCACAGAAACACACACCTCCCGATGTGGAGCGGG
AGCCCCCTGATCAGAGCAGTATTCAAGTTCCTGTGCTTCTCCTTGAATATTTCAAGCATGTTAATCCGGG
TAGACTAGAGTTCATAGAGTACAAATTTGGTGTAAACATTGAAATCCAAGCTAGTTCTCCCAATATGGTC
ACTGTAGGCTTCACCTCCAGCCCATTTGGCAACGTAGAAGAAGCAAGTCAGTCCTTTGTCAGAGACTTTC
AGAAATGCTCGCAGTCTCTGAAGCAAGATTGTATCTCTTTAGAGGAGCACCAGAGAGCAAAGGAGGTCAG
ACAGGAGCTGAGTCGCTGCTTCCCAAAGCTCTTGATAAAGGGACAGGGAAGAACGCTGACTCTCCTCGGC
TCTCCTGCTGACATTTCAGCCGCCACAGAAAAAGTCTCCCAAGGTCTTGGCCTGAGACCTGTGAAAATAA
CCGCATCTGGGTACACGACGGGCATCGAGGTCGATTCAACACGCTTTAAGCTTCTAGAGCCTGAACTGCT
CCAGGAAATCTCAGAGATCGAGCAGAAGTTTAACACCCGTGGCAAAGTCCAGGAAAAAGGCCAGAAAACC
TGCATTCTTTTTGTCCCCAAGGATAAAGACTTAGACCTGTCAGTGCAGTCCTACACAGGTTTTACTGATG
CCTTCCAGCGTGCCACGTGGCAGCTGAGGACAGAAGTTCTGTCGCTGAAAGGGTTGGGCAAGGAGAGAGC
TCGCTTACACAATACCAAGTTTGCCGACAACTTTAAAAAAGAGCACCCGAATGTGCACTTTGTGACATCT
CAGGAGTCAGTGACCTTGACTGGCTTGCCACATCACCTTGCGCAGGCAATGCAGTATGTCTCCAAAAGAA
TGGGACTGGCACCGTCATCTGGAGAGAAACTCGCTATGGATCAGGAAACCCCCATGGAGATCAGCAGTAG
TGACCCCCATGGAGATCAGCAGGAGAATGCAGCCTTACCTGCTCCCCGAGGCACCTCTAGCAGCCCTGCA
GCTTCGAAGGGGACTGAGGACTACTGTGTCATCTGCATGGATACCATCAGCAACAAGCACGTGCTCCCCA
AGTGCAAGCATGAATTCTGCACCTCGTGTATCAGCAAAGCCATGCTTATCAAGCCTGTCTGTCCTGTGTG
TCTGACTTCCTACGGCATCCAGAAAGGGAACCAGCCAGAGGGAACCATGTCTTACTCCACTCAAAAAGGG
TCACTTCCAGGTTATGAAGGCTGTGGCACCATTGTGATTAATTATGAAATAAAAGATGGCATCCAAACAA
AAGAGCACCCAAACCCAGGAAAGGCTTATCATGGAACACGGCGAACTGCATACTTGCCTGATAATACTGA
GGGAAGAAAGGTTTTGGATCTGCTCCACGAAGCCTTTAAGCACAGACTGACTTTCACAATAGGATACTCT
CGAGCAACAGGAGTCTCGGATGTCATTACATGGAATGATATTCATCACAAAACATCCAAGTTTGGAGGAC
CAGCAAATTTTGGCTACCCTGATCCTGATTACCTGAAACGTGTCAAGGAGGAGCTGAAAGCAAAAGGCAT
TGAGTAA

Translation (748 aa):
MASSPDPPSPLLVRLRESIPKAHRKLEIYFQSRASGGGECSVQPVGPSAPDTYEVKFLKKADKEKVLKKS
EHEMLVHNKPVTIVLETTKKPVEDLRPRLPSLTQPVETPSSRPPSLTGSLDEALCDDIHPQDGLVSNSVD
SVVQKIFLAVTAELNCDLLSKEQRASITTVCPHIIKSMEGSDGIKKVCGNFKDIEKIHHFLSEQLLEREQ
KRKGSEQKRKCAPQKHTPPDVEREPPDQSSIQVPVLLLEYFKHVNPGRLEFIEYKFGVNIEIQASSPNMV
TVGFTSSPFGNVEEASQSFVRDFQKCSQSLKQDCISLEEHQRAKEVRQELSRCFPKLLIKGQGRTLTLLG
SPADISAATEKVSQGLGLRPVKITASGYTTGIEVDSTRFKLLEPELLQEISEIEQKFNTRGKVQEKGQKT
CILFVPKDKDLDLSVQSYTGFTDAFQRATWQLRTEVLSLKGLGKERARLHNTKFADNFKKEHPNVHFVTS
QESVTLTGLPHHLAQAMQYVSKRMGLAPSSGEKLAMDQETPMEISSSDPHGDQQENAALPAPRGTSSSPA
ASKGTEDYCVICMDTISNKHVLPKCKHEFCTSCISKAMLIKPVCPVCLTSYGIQKGNQPEGTMSYSTQKG
SLPGYEGCGTIVINYEIKDGIQTKEHPNPGKAYHGTRRTAYLPDNTEGRKVLDLLHEAFKHRLTFTIGYS
RATGVSDVITWNDIHHKTSKFGGPANFGYPDPDYLKRVKEELKAKGIE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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