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Report for CCDS37133.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37133.1 Public Mus musculus 15 Tmprss6 23 108 98 CCDS HistoryNCBI Gene:71753Re-query CCDS DB by CCDS ID:37133.1Re-query CCDS DB by GeneID:71753See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37133.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000017086.4 ENSMUSP00000017086.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000017086.4Link to Ensembl Protein Viewer:ENSMUSP00000017086.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000017086Re-query CCDS DB by Protein ID:ENSMUSP00000017086
Original member Current member NCBI NM_027902.2 NP_082178.2 Accepted alive Link to Nucleotide Sequence:NM_027902.2Link to Protein Sequence:NP_082178.2Re-query CCDS DB by Nucleotide ID:NM_027902Re-query CCDS DB by Protein ID:NP_082178Link to BLAST:NP_082178.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082178.2 811 Q9DBI0-1 811 100% 0 0

Chromosomal Locations for CCDS 37133.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 78440214 78440372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78440608 78440744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78442282 78442553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78443677 78443845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78444096 78444212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78445284 78445397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78446204 78446302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78446663 78446808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78452476 78452585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78452792 78452904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78454145 78454281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78454914 78455118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78459430 78459471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78459745 78459923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78460440 78460507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78461245 78461378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78465109 78465343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2436 nt):
ATGCCGAGATGTTTCCAGCTCCCCTGTTCTACCAGGATGCCCACCACCGAGGTCCCCCAAGCGGCTGATG
GTCAGGGCGATGCGGGTGATGGAGAGGAAGCTGCTGAGCCAGAGGGGAAGTTCAAGCCCCCAAAAAACAC
CAAGAGAAAAAACCGGGACTACGTCCGCTTCACGCCACTGTTGCTGGTCTTGGCTGCGCTGGTCTCAGCA
GGGGTCATGCTTTGGTATTTCCTAGGGTACAAAGCGGAAGTGACCGTAAGCCAGGTGTACTCTGGCAGCC
TCCGGGTGCTCAACCGTCATTTCTCCCAGGACCTGGGCCGACGGGAGTCTATTGCTTTCCGCAGTGAATC
TGCCAAAGCCCAGAAGATGCTCCAAGAACTGGTTGCCAGCACCCGCCTGGGTACTTACTACAACTCTAGT
TCTGTCTACTCCTTTGGGGAGGGACCCCTCACCTGCTTCTTCTGGTTTATCCTTGACATCCCTGAGTACC
AGCGACTGACCCTGAGCCCTGAAGTAGTGCGCGAGCTCCTGGTGGATGAGCTACTGTCCAACAGCTCAAC
CCTGGCTTCCTATAAGACCGAATATGAGGTGGACCCGGAAGGCCTGGTGATCCTGGAAGCCAGTGTGAAC
GACATAGTCGTACTGAATTCCACGCTGGGCTGTTATCGCTACAGCTATGTGAACCCAGGCCAGGTCCTCC
CATTGAAGGGGCCTGACCAGCAGACCACAAGCTGCCTGTGGCATCTGCAAGGGCCCGAAGACCTCATGAT
CAAAGTGCGGCTGGAGTGGACCCGGGTCGATTGCAGAGACAGGGTGGCGATGTACGACGCAGCTGGGCCC
CTGGAGAAGAGACTTATCACCTCGGTCTATGGGTGCAGCCGCCAGGAACCTGTGATGGAGGTGCTGGCAT
CGGGCTCCGTCATGGCCGTGGTGTGGAAAAAGGGCATGCATAGCTACTATGACCCTTTCCTGCTCTCAGT
GAAGTCTGTGGCCTTCCAGGACTGCCAGGTGAACCTGACACTGGAGGGCCGGCTGGACACACAGGGCTTC
CTCCGTACACCCTACTACCCCAGTTACTACTCTCCCAGTACCCACTGCTCCTGGCATCTCACGGTACCCT
CTCTGGACTACGGCTTGGCGCTCTGGTTCGATGCCTACGCACTGAGGAGGCAGAAGTACAACCGACTGTG
TACTCAGGGCCAGTGGATGATCCAGAACAGGAGGCTGTGTGGCTTCCGTACCCTGCAGCCATATGCTGAG
AGGATCCCCATGGTGGCCTCAGATGGTGTCACCATCAACTTCACCTCCCAGATCTCCCTCACAGGCCCGG
GTGTGCAAGTGTACTACAGCTTGTACAACCAATCAGACCCCTGCCCTGGTGAGTTCCTCTGCTCTGTGAA
TGGACTGTGTGTCCCTGCGTGTGACGGGATCAAGGACTGCCCCAATGGCCTGGATGAGAGAAACTGTGTC
TGCAGAGCCATGTTCCAGTGCCAAGAGGACAGCACGTGCATTTCACTGCCTAGAGTCTGTGACCGGCAGC
CCGACTGTCTCAATGGCAGTGACGAAGAACAGTGCCAAGAAGGAGTGCCCTGTGGGACATTCACTTTCCA
GTGTGAGGACCGGAGCTGTGTGAAGAAGCCCAACCCAGAGTGTGACGGCCAGTCAGATTGCAGAGACGGC
TCAGATGAGCAACACTGTGACTGTGGCCTCCAGGGCCTCTCCAGCCGTATTGTGGGCGGGACCGTGTCCT
CCGAGGGTGAGTGGCCATGGCAGGCCAGCCTCCAGATTCGGGGTCGACACATCTGTGGGGGGGCTCTCAT
CGCTGACCGCTGGGTCATAACGGCCGCCCACTGCTTCCAGGAGGACAGCATGGCCTCCCCGAAGCTGTGG
ACCGTGTTCCTGGGAAAGATGCGGCAGAACTCGCGCTGGCCAGGCGAGGTGTCCTTCAAGGTGAGCCGTC
TGTTCCTGCACCCGTACCACGAGGAGGACAGCCATGACTACGACGTGGCCCTGCTGCAGCTCGACCACCC
CGTGGTGTACTCGGCCACTGTGCGCCCCGTCTGCCTGCCTGCCCGCTCCCACTTCTTTGAGCCAGGCCAG
CACTGCTGGATCACAGGCTGGGGAGCCCAGCGAGAGGGTGGTCCGGTGAGCAACACCCTGCAGAAGGTGG
ACGTACAGCTGGTCCCTCAGGACCTCTGCAGTGAGGCCTACCGCTACCAGGTGTCCCCACGCATGCTCTG
TGCTGGCTACCGCAAGGGCAAGAAAGATGCCTGCCAGGGTGACTCTGGAGGCCCACTGGTTTGCAGGGAG
CCCAGTGGCCGCTGGTTCCTGGCAGGGTTGGTTAGCTGGGGCCTGGGCTGTGGCCGACCCAATTTCTTTG
GCGTCTACACCCGTGTCACACGTGTGATCAACTGGATCCAGCAGGTGCTGACCTGA

Translation (811 aa):
MPRCFQLPCSTRMPTTEVPQAADGQGDAGDGEEAAEPEGKFKPPKNTKRKNRDYVRFTPLLLVLAALVSA
GVMLWYFLGYKAEVTVSQVYSGSLRVLNRHFSQDLGRRESIAFRSESAKAQKMLQELVASTRLGTYYNSS
SVYSFGEGPLTCFFWFILDIPEYQRLTLSPEVVRELLVDELLSNSSTLASYKTEYEVDPEGLVILEASVN
DIVVLNSTLGCYRYSYVNPGQVLPLKGPDQQTTSCLWHLQGPEDLMIKVRLEWTRVDCRDRVAMYDAAGP
LEKRLITSVYGCSRQEPVMEVLASGSVMAVVWKKGMHSYYDPFLLSVKSVAFQDCQVNLTLEGRLDTQGF
LRTPYYPSYYSPSTHCSWHLTVPSLDYGLALWFDAYALRRQKYNRLCTQGQWMIQNRRLCGFRTLQPYAE
RIPMVASDGVTINFTSQISLTGPGVQVYYSLYNQSDPCPGEFLCSVNGLCVPACDGIKDCPNGLDERNCV
CRAMFQCQEDSTCISLPRVCDRQPDCLNGSDEEQCQEGVPCGTFTFQCEDRSCVKKPNPECDGQSDCRDG
SDEQHCDCGLQGLSSRIVGGTVSSEGEWPWQASLQIRGRHICGGALIADRWVITAAHCFQEDSMASPKLW
TVFLGKMRQNSRWPGEVSFKVSRLFLHPYHEEDSHDYDVALLQLDHPVVYSATVRPVCLPARSHFFEPGQ
HCWITGWGAQREGGPVSNTLQKVDVQLVPQDLCSEAYRYQVSPRMLCAGYRKGKKDACQGDSGGPLVCRE
PSGRWFLAGLVSWGLGCGRPNFFGVYTRVTRVINWIQQVLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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