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Report for CCDS37027.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37027.1 Public Mus musculus 15 Rpl37 23 108 98 CCDS HistoryNCBI Gene:67281Re-query CCDS DB by CCDS ID:37027.1Re-query CCDS DB by GeneID:67281See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37027.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045356.8 ENSMUSP00000046506.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045356.8Link to Ensembl Protein Viewer:ENSMUSP00000046506.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000045356Re-query CCDS DB by Protein ID:ENSMUSP00000046506
Original member NCBI NM_026069.3 NP_080345.1 Updated not alive Link to Nucleotide Sequence:NM_026069.3Link to Protein Sequence:NP_080345.1Re-query CCDS DB by Nucleotide ID:NM_026069Re-query CCDS DB by Protein ID:NP_080345
Current member NCBI NM_026069.4 NP_080345.1 Accepted alive Link to Nucleotide Sequence:NM_026069.4Link to Protein Sequence:NP_080345.1Re-query CCDS DB by Nucleotide ID:NM_026069Re-query CCDS DB by Protein ID:NP_080345Link to BLAST:NP_080345.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080345.1 97 Q9D823 97 100% 0 0

Chromosomal Locations for CCDS 37027.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 5116682 5116684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 5117287 5117422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 5117619 5117703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 5118567 5118636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (294 nt):
ATGACGAAGGGAACGTCATCCTTTGGTAAGCGTCGCAACAAGACGCACACGCTGTGCCGCCGCTGTGGCT
CCAAGGCCTACCACCTTCAGAAGTCGACTTGTGGCAAGTGTGGCTACCCTGCCAAGCGCAAGAGGAAGTA
TAACTGGAGTGCCAAGGCTAAGAGACGAAACACTACCGGGACTGGTCGGATGAGGCACCTAAAGATTGTC
TACCGCAGATTCAGACATGGATTCCGTGAGGGAACAACGCCGAAACCCAAGAGGGCAGCTGTCGCAGCAT
CCAGTTCTTCTTAA

Translation (97 aa):
MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIV
YRRFRHGFREGTTPKPKRAAVAASSSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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