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Report for CCDS36971.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36971.1 Public Mus musculus 14 Phyhip 23 108 98 CCDS HistoryNCBI Gene:105653Re-query CCDS DB by CCDS ID:36971.1Re-query CCDS DB by GeneID:105653See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36971.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003561.9 ENSMUSP00000003561.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003561.9Link to Ensembl Protein Viewer:ENSMUSP00000003561.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000003561Re-query CCDS DB by Protein ID:ENSMUSP00000003561
Original member Current member NCBI NM_145981.3 NP_666093.1 Accepted alive Link to Nucleotide Sequence:NM_145981.3Link to Protein Sequence:NP_666093.1Re-query CCDS DB by Nucleotide ID:NM_145981Re-query CCDS DB by Protein ID:NP_666093Link to BLAST:NP_666093.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666093.1 330 Q8K0S0 330 100% 0 0

Chromosomal Locations for CCDS 36971.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 70461759 70461923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70463240 70463414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70465450 70465567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70466801 70467335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGGAGCTTCTGTCTACCCCCCACAGCATCGAGATCAACAATATCACCTGTGACTCTTTCCGTATCTCCT
GGGCCATGGAGGACAGTGACCTGGAGAGGGTCACCCATTATTTTATTGACCTGAACAAGAAGGAGAATAA
GAATTCCAACAAGTTCAAGCACCGAGATGTCCCCACCAAGCTTGTGGCCAAGGCCGTGCCTCTGCCCATG
ACGGTGAGAGGCCACTGGTTCCTGAGTCCCCGGACAGAGTACAGTGTGGCAGTGCAGACTGCGGTGAAGC
AGAGTGATGGAGAGTACCTGGTGTCTGGCTGGAGTGAGACTGTGGAGTTCTGCACTGGGGACTATGCCAA
GGAACACCTTGCCCAGCTGCAGGAGAAGGCTGAGCAGATCGCTGGCCGCATGCTCCGCTTCTCTGTGTTC
TACCGCAACCATCACAAGGAGTACTTCCAGCATGCCAGGACCCACTGTGGGAACGTACTGCAGCCTTACC
TGAAGGACAACAGCGGTAGCCACGGCTCCCCCACCAGCGGCATGCTGCACGGGGTCTTCTTCAGCTGCAA
CACGGAGTTCAACACAGGCCAGCCCCCGCAGGACTCCCCTTACGGCCGCTGGCGCTTCCAGATCCCTGCC
CAGCGCCTCTTCAACCCCAGCACCAACCTCTACTTTGCGGACTTCTACTGTATGTACACAGCCTACCACT
ATGCCATCTTGGTGCTGGCACCCAAAGGCTCCCTGGGGGACCGCTTCTGTCGTGACCGGCTGCCCCTCCT
GGACATTGCCTGCAACAAGTTCCTGACCTGCAGTGTGGAGGATGGAGAGCTGATCTTCCGCCACGCTCAG
GACCTCATCTTGGAGATCATCTACACCGAGCCTGTCGACCTGTCCCTGGGCACCCTGGGAGAGATCAGCG
GGCACCAGCTCATGAGCCTGTCCACTGCTGACGCCAAGAAAGATCCCAGCTGCAAGACCTGCAACATCAG
CGTGGGCCGCTAG

Translation (330 aa):
MELLSTPHSIEINNITCDSFRISWAMEDSDLERVTHYFIDLNKKENKNSNKFKHRDVPTKLVAKAVPLPM
TVRGHWFLSPRTEYSVAVQTAVKQSDGEYLVSGWSETVEFCTGDYAKEHLAQLQEKAEQIAGRMLRFSVF
YRNHHKEYFQHARTHCGNVLQPYLKDNSGSHGSPTSGMLHGVFFSCNTEFNTGQPPQDSPYGRWRFQIPA
QRLFNPSTNLYFADFYCMYTAYHYAILVLAPKGSLGDRFCRDRLPLLDIACNKFLTCSVEDGELIFRHAQ
DLILEIIYTEPVDLSLGTLGEISGHQLMSLSTADAKKDPSCKTCNISVGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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