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Report for CCDS36764.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36764.1 Public Mus musculus 13 Mccc2 23 108 98 CCDS HistoryNCBI Gene:78038Re-query CCDS DB by CCDS ID:36764.1Re-query CCDS DB by GeneID:78038See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36764.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022148.6 ENSMUSP00000022148.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022148.6Link to Ensembl Protein Viewer:ENSMUSP00000022148.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000022148Re-query CCDS DB by Protein ID:ENSMUSP00000022148
Original member Current member NCBI NM_030026.2 NP_084302.1 Accepted alive Link to Nucleotide Sequence:NM_030026.2Link to Protein Sequence:NP_084302.1Re-query CCDS DB by Nucleotide ID:NM_030026Re-query CCDS DB by Protein ID:NP_084302Link to BLAST:NP_084302.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084302.1 563 Q3ULD5 563 100% 0 0

Chromosomal Locations for CCDS 36764.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 99948839 99948956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99952156 99952241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99954136 99954250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99954615 99954771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99958805 99958871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99960900 99960976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99963808 99963880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99967641 99967736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99967834 99967933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99971779 99971843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99976409 99976522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99988536 99988648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99990248 99990375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99991212 99991313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99993567 99993651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100000250 100000316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100015386 100015514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1692 nt):
ATGTGGGGCGCGCTGAGGTCAGCTCTGCGACCGTGCTGTCGGGCTGCTGTACCCCCGCAGCGTGCCTATC
ACGGGGACTCAGTGGCCCGACTGGGCACCCAGCCTGACTCGGCCTCCTCCACCTACCAGGAGAACTATGA
GCAGATGAAAGCTTTAGTGAGTCAACTTCATGAGCGAGCCCAGTATGTGAGACTAGGAGGGAGTGAGAAG
GCCCGGGCGCGGCACACATCCAGAGGAAAACTGCTCCCCAGAGACAGAATCGACAATCTCATAGACCCAG
GGTCTCCCTTTCTGGAATTCTCCCAGTTTGCAGGTTACCAGTTATATGGCGACGAGGAAGTCCCCGCCGG
TGGCATCATCACGGGCATTGGGCGAGTGTCGGGGGTAGAATGCATGATTGTGGCTAACGATGCCACCGTC
AAAGGAGGCACCTACTACCCAGTGACTGTGAAAAAGCACGTGCGGGCACAAGAGATTGCGCTGCAGAACC
GACTCCCATGCATCTATCTGGTTGACTCAGGAGGGGCCAACTTACCTCGGCAAGCAGACACCTTTCCAGA
CCGGGACCACTTTGGCCGCATATTCTATAATCAGGCAATTATGTCTTCTAAAAACATCACACAGATAGCT
GTGGTCATGGGCTCCTGTACGGCAGGAGGTGCGTATGTGCCTGCAATGGCTGATGAAAACATCATTGTAC
AGAAGCAGGGTACCATCTTCTTGGCTGGACCACCCTTGGTGAAGGCAGCTACAGGTGAAGAGGTGTCCGC
TGAGGATCTCGGAGGTGCCGACCTGCATTGCAGAAAGTCTGGGGTCACTGACCACTATGCTTTGGACGAC
CACCACGCCCTCCACTTAACAAGGAAGGTTGTGAGGAGTCTCAATTATCAGAAGAAAATGGATGTTACCA
TTGAGCCTTCTGAGGAGCCCTTGTTCCCTGCAGATGAGCTCTATGGAATAGTTGGTGCAAACCTGAAGAG
GAGCTTTGATGTCCGAGAGGTCATTGCTAGAATCGTGGATGGAAGCAGATTCAATGAGTTCAAGGCCTTA
TATGGAGACACCCTAGTTACAGGATTTGCTCGAATATTTGGGTACCCCGTTGGCATCATTGGAAACAATG
GAGTTTTGTTTTCTGAATCTGCTAAGAAGGGTGCTCACTTCGTCCAGCTGTGCTGCCAGAGAAATATCCC
TCTGCTGTTTCTTCAGAATATCACCGGATTCATGGTTGGCAGAGACTATGAAGCTGAAGGGATTGCCAAG
GATGGTGCCAAAATGGTAGCTGCAGTAGCCTGTGCCAAAGTGCCTAAGATAACTGTCATAATTGGGGGAT
CGTACGGGGCTGGAAACTACGGAATGTGTGGCAGAGCATACAGTCCAAGGTTTCTCTACATGTGGCCAAA
TGCCCGCATCTCTGTGATGGGAGGAGAGCAGGCAGCCACGGTGTTAGCCACAGTGGCTAGAGACCAGAAA
GCACGCGAGGGGAAGCAGTTCTCCAGTGCAGAGGAGGCAGCTTTGAAAGAACCCATCATTAAGAGGTTCG
AAGAGGAAGGGAACCCTTACTACTCTAGTGCAAGGCTGTGGGACGATGGGATTATTGACCCGGTGGACAC
CAGGCTGGTCCTGGGGCTCAGCCTCAGTGCAGCCCTCAATGCGCCCATCCAGAGGACTGACTTTGGCATC
TTCAGGATGTAA

Translation (563 aa):
MWGALRSALRPCCRAAVPPQRAYHGDSVARLGTQPDSASSTYQENYEQMKALVSQLHERAQYVRLGGSEK
ARARHTSRGKLLPRDRIDNLIDPGSPFLEFSQFAGYQLYGDEEVPAGGIITGIGRVSGVECMIVANDATV
KGGTYYPVTVKKHVRAQEIALQNRLPCIYLVDSGGANLPRQADTFPDRDHFGRIFYNQAIMSSKNITQIA
VVMGSCTAGGAYVPAMADENIIVQKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVTDHYALDD
HHALHLTRKVVRSLNYQKKMDVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFNEFKAL
YGDTLVTGFARIFGYPVGIIGNNGVLFSESAKKGAHFVQLCCQRNIPLLFLQNITGFMVGRDYEAEGIAK
DGAKMVAAVACAKVPKITVIIGGSYGAGNYGMCGRAYSPRFLYMWPNARISVMGGEQAATVLATVARDQK
AREGKQFSSAEEAALKEPIIKRFEEEGNPYYSSARLWDDGIIDPVDTRLVLGLSLSAALNAPIQRTDFGI
FRM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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