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Report for CCDS36712.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36712.1 Public Mus musculus 13 Zfp595 23 108 98 CCDS HistoryNCBI Gene:218314Re-query CCDS DB by CCDS ID:36712.1Re-query CCDS DB by GeneID:218314See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36712.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109735.8 ENSMUSP00000105357.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109735.8Link to Ensembl Protein Viewer:ENSMUSP00000105357.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000109735Re-query CCDS DB by Protein ID:ENSMUSP00000105357
Original member Current member EBI ENSMUST00000168892.8 ENSMUSP00000126862.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168892.8Link to Ensembl Protein Viewer:ENSMUSP00000126862.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168892Re-query CCDS DB by Protein ID:ENSMUSP00000126862
Original member Current member EBI ENSMUST00000169142.7 ENSMUSP00000129905.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169142.7Link to Ensembl Protein Viewer:ENSMUSP00000129905.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169142Re-query CCDS DB by Protein ID:ENSMUSP00000129905
Original member Current member NCBI NM_177622.3 NP_808290.1 Accepted alive Link to Nucleotide Sequence:NM_177622.3Link to Protein Sequence:NP_808290.1Re-query CCDS DB by Nucleotide ID:NM_177622Re-query CCDS DB by Protein ID:NP_808290Link to BLAST:NP_808290.1

Chromosomal Locations for CCDS 36712.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 67316329 67317977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67320272 67320367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67320828 67320954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67332467 67332472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1878 nt):
ATGGAGGATATGCTGTCATTCTGGGATGTGGCTATGTATTTCTCTGCAGAGGAGTGGGAATACCTGGGTC
CTGCTCAGTGGAAAATGTACAGAGATGTGATGCTGGAGAATTACAGCAACCTTGTGTTCCTGGGTCTTGC
TTCCACTAAGCCATATCTAGTCACATTTCTGGAGCAAAGACAAGAGCTTTCAGATGTGAAGAGACAAGCG
GCCACTGCTAAGTACTCAGGGGGGAAAAGCTATACGTGTAAAGAATGTGGCAAAGTCTTTGAGGCGGAAA
AAGGATTTCAAAATCATCAGATAATTCATTTAGGAGTGAAGTCCTGCAAGTGTGAAGAGTGTGGCAAGTC
CTTCCATTTTTCATCACTACTTTCTGAACACAAAAGGATTCATACAGGAGAAAAACCCTACAAGTGTGAA
ATACATAGCAAGGCCTTTCATGTTCCATCAAAACTTTTTCAACACAGGATAATTCACACAGGAGAAAAAC
CCTACAACTGTGAAGTATGTGGCAAGGCCTTCTGCACTTCATTATTCCTTTCTAAACACAAGATAATTCA
TATGGGAAAGAATCCTTGCAAGTGTGAAGTATGTGGCAAGGCCTTCGAATATCCATCAAGACTTTCAAAA
CATAAGAAAATTCATACAGGAGAGAAACCATACAAGTGTAAAGTATGTGGAAAGGCCTACCGCTCTCCAT
CATCACTTTGTGAACACAAGAGAACTCATACAGGAGGGAAACCCTACAAGTGTGAAGTATGTGGCAAGGC
CTTCCACTATCCATCATTACTTTCAAAACACAAGATAATTCATACAGAAGAAAAACCCTACAAGTGTGAA
GTATGTGGTAAGGCCTTCCATTATCTGTCAAGACTTTCTAACCATAAGACAATTCATACAGGAGAGAAAC
CGTACAAGTGTGAAGTATGTGGGAAGGCCTTTCATGTTCCATCATCACTTTCTGAACACAAGAGAACTCA
TACAGGAAAGAAACCTTACAAATGTGAAGTGTGTGGCAAGGAGTTTCGTTGTCCATCATTATTTTCTAAC
CACAAGAGAATACATACAGGTGAAAAACCCTATAGTTGTGAAGTATGTGGCAAGGCCTTCCATACTACAA
CTTTATGTTCTATACACAAGAGAATTCACACAGGAGAGAAACCTTACAAGTGTGAAGTATGTGGCAAGGC
CTTCCATTATTCATCAAGACTTTCCAACCATAAGAAAATTCATGCCGGAGAGAAACCATACAAGTGTGAA
GTATGTGGCAAGGCCTTCCATTATCCATCCATACTTTCTAAACACAAGACAATTCATACAGAAGATAATC
CCTACAAGTGTGAAGTATGTGGCAAAGCATTTGATTATCCATCAAGACTTTCCAACCATAAGAAAGTTCA
TACAGAAGAGAAACCATACCAGTGTGACATATGTGGCAAGGCCTTCCATTATGCATCATTACTTTCTAAA
CACAAGATAATTCATATTGGAGAAAAGCCCTATAAGTGTGAAGTATGTGACAAGGCCTTTCATTACCCAT
CAAGACTTTCCAACCATAAGAAAATTCATACAGGAGAGAAACCATACAAGTGTGAAATATGTGGAAATGT
CTTCCGTTTTCCATCATCCCTTTCTGAACATAAGAGAATTCACACTGGAGACAAACCATACAAGTGCCAA
ATATGTGGCAAGGCCTTCCATTATCCATCATTACTTTCTAAACACAAGATAATTCATACAGGAGAAAATC
CCTACAAGTGTGAAGTATGTGGCAAGTTCTTTAATTATTCATCAAGACTTTACAAACATAAGAAAATTCA
TACACGAGAGAAGTCCTACAAATATAAAGAATGTGGCCTAGCTTTCTATTGTCAATAA

Translation (625 aa):
MEDMLSFWDVAMYFSAEEWEYLGPAQWKMYRDVMLENYSNLVFLGLASTKPYLVTFLEQRQELSDVKRQA
ATAKYSGGKSYTCKECGKVFEAEKGFQNHQIIHLGVKSCKCEECGKSFHFSSLLSEHKRIHTGEKPYKCE
IHSKAFHVPSKLFQHRIIHTGEKPYNCEVCGKAFCTSLFLSKHKIIHMGKNPCKCEVCGKAFEYPSRLSK
HKKIHTGEKPYKCKVCGKAYRSPSSLCEHKRTHTGGKPYKCEVCGKAFHYPSLLSKHKIIHTEEKPYKCE
VCGKAFHYLSRLSNHKTIHTGEKPYKCEVCGKAFHVPSSLSEHKRTHTGKKPYKCEVCGKEFRCPSLFSN
HKRIHTGEKPYSCEVCGKAFHTTTLCSIHKRIHTGEKPYKCEVCGKAFHYSSRLSNHKKIHAGEKPYKCE
VCGKAFHYPSILSKHKTIHTEDNPYKCEVCGKAFDYPSRLSNHKKVHTEEKPYQCDICGKAFHYASLLSK
HKIIHIGEKPYKCEVCDKAFHYPSRLSNHKKIHTGEKPYKCEICGNVFRFPSSLSEHKRIHTGDKPYKCQ
ICGKAFHYPSLLSKHKIIHTGENPYKCEVCGKFFNYSSRLYKHKKIHTREKSYKYKECGLAFYCQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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