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Report for CCDS36305.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36305.1 Public Mus musculus 11 Krt24 23 108 98 CCDS HistoryNCBI Gene:75706Re-query CCDS DB by CCDS ID:36305.1Re-query CCDS DB by GeneID:75706See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36305.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000017255.3 ENSMUSP00000017255.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000017255.3Link to Ensembl Protein Viewer:ENSMUSP00000017255.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000017255Re-query CCDS DB by Protein ID:ENSMUSP00000017255
Original member Current member NCBI NM_029393.2 NP_083669.1 Accepted alive Link to Nucleotide Sequence:NM_029393.2Link to Protein Sequence:NP_083669.1Re-query CCDS DB by Nucleotide ID:NM_029393Re-query CCDS DB by Protein ID:NP_083669Link to BLAST:NP_083669.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083669.1 512 A1L317 512 100% 0 0

Chromosomal Locations for CCDS 36305.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 99280212 99280315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 99280969 99281045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 99281249 99281466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 99282093 99282218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 99282314 99282475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 99282642 99282798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 99283545 99283627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 99284596 99285207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1539 nt):
ATGTTCTGCTCAGCTCAGAAAGGGTCCTGCTCCTCCCGAGTCTCCTCCTCCGGGGCTGTGGGCAGCAGGG
GGTGCACTGGGGGAAGTTCCTTTGGCGGTGGGAGCAGCTGTGGGCTAGGGGGAGGCTCTGCCTGGGGCTT
CCAGGGGAGCAGCAACAGCTGGAGCCTGAGTGGGGGATCTAAGGGTAGCATGGGAGGGGGCTTCGGCAGC
TGCTCAGTAAGGGGTGGATTCGGAGCAGCCTCTAGCTACGGTGGAGGGTCGGGCTTTGGCGGGAGCTCTG
GCTTTGGTGGGGGCTCTGGCTTTGGTGGGGGCTCTGGCTTTGGTGGGGGATCTAGTGGAGGCTTCTCTAG
CTATGGAGGTAGTATGGGGTGCGGTCTTGGTGGCGTCAGTGGCTATGATGGGGGCCTTCTCTCTGGAAGC
GAAAAGCAAACTATGCAAGACCTCAATGACCGGCTAGCCAACTACCTAGACAAAGTCCGAGCCCTGGAGG
AAGCCAACACGGATCTGGAGTGTAAAATCAAGGACTGGTATGGCAAGCATGGGTCTGTAAAAGGTGGGTC
TGGAAGAGACTACAGCCAATACTACTCAATCATCGAAGATCTGAAGAAGCAGATCCTTTCAGCCACTTGT
GAAAACGCCAGAATGACTCTGCAGATTGACAACGCTAGGCTGGCTGCTGATGACTTCAGAATGAAGTATG
AGCATGAACTCTGCCTTCGAGAGTGCTTGGAGGCCGACATCAATGGCCTGCGCAAAGTGCTGGACGAAAT
GACCATGACTCGCTGTGACCTGGAGATGCAGATTGAGGGTCTGACTGAGGAGCTGGTCTTCCTGAGGAAG
AACCACGAGGAGGAAATGAAGTGTATGCAAGGAAGCTCTGGAGGGGATGTGACAGTAGAAATGAATGCTG
CCCCAGGAGTCGACCTGACCAAACTACTGAATGACATGAGGGCTCAGTATGAGGCGATGGCCGAGCAGAA
CCGCCAGGAAGCTGAGAGACAGTTCAACGAGCGGAGTGCATCCCTGCAAGCCCAAATCTCTTCAGATGCA
GGGGAAGCCAATTGCGCCAGGAGTGAAGTAATGGAATTGAAGCGCACAGTGCAGACCCTGGAAATTGAGC
TTCAGTCTCAGCTGGCCCTGAAATGCTCTCTGGAAGGGACCCTGGCTGACACAGAAGCTGGCTATGTGGC
TCAGCTGTCTGGAATCCAGGCACAGATTAGCAGCCTGGAGGAGCAGCTTAGCCAGATCCGGGCTGAGACC
CAGTGCCAGAGTGCTGAGTACGAATGCCTGCTGAACATCAAGACCCGCCTGGAGCAGGAGATTGAGACCT
ACCGCCGCCTGCTCAACGGAGACGGGGGTGGATGTGACTATAGAAACTTAGTATCCAAGAATGTGGTATT
GAGTGACTCAGGAAGCTGTGCTGGCCAAGGAAAAGATCCCAGCAAGACAAGGGTGACAAAGACCATCATA
GAGGAGGTGGTGGATGGTAGAGTTGTCTCGTCTCAAGTCAGCAACATTTCTGAAGTGAAAATAAAATAA

Translation (512 aa):
MFCSAQKGSCSSRVSSSGAVGSRGCTGGSSFGGGSSCGLGGGSAWGFQGSSNSWSLSGGSKGSMGGGFGS
CSVRGGFGAASSYGGGSGFGGSSGFGGGSGFGGGSGFGGGSSGGFSSYGGSMGCGLGGVSGYDGGLLSGS
EKQTMQDLNDRLANYLDKVRALEEANTDLECKIKDWYGKHGSVKGGSGRDYSQYYSIIEDLKKQILSATC
ENARMTLQIDNARLAADDFRMKYEHELCLRECLEADINGLRKVLDEMTMTRCDLEMQIEGLTEELVFLRK
NHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQNRQEAERQFNERSASLQAQISSDA
GEANCARSEVMELKRTVQTLEIELQSQLALKCSLEGTLADTEAGYVAQLSGIQAQISSLEEQLSQIRAET
QCQSAEYECLLNIKTRLEQEIETYRRLLNGDGGGCDYRNLVSKNVVLSDSGSCAGQGKDPSKTRVTKTII
EEVVDGRVVSSQVSNISEVKIK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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