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Report for CCDS36028.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36028.1 Public Mus musculus 10 Bltp3b 23 108 98 CCDS HistoryNCBI Gene:75089Re-query CCDS DB by CCDS ID:36028.1Re-query CCDS DB by GeneID:75089See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36028.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020112.6 ENSMUSP00000020112.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020112.6Link to Ensembl Protein Viewer:ENSMUSP00000020112.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000020112Re-query CCDS DB by Protein ID:ENSMUSP00000020112
Original member Current member NCBI NM_029166.2 NP_083442.2 Accepted alive Link to Nucleotide Sequence:NM_029166.2Link to Protein Sequence:NP_083442.2Re-query CCDS DB by Nucleotide ID:NM_029166Re-query CCDS DB by Protein ID:NP_083442Link to BLAST:NP_083442.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083442.2 1457 A2RSJ4 1457 100% 0 0

Chromosomal Locations for CCDS 36028.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 89745245 89745288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89772587 89772749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89774080 89774118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89775939 89776030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89779835 89780024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89781127 89781267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89782570 89782740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89787105 89787285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89789298 89789381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89790551 89790733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89791363 89791481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89794483 89794624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89803019 89803212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89804712 89806213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89806624 89806796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89808518 89808660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89809628 89809778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89811487 89811740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89812044 89812152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89816040 89816221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 89817935 89818051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4374 nt):
ATGGCTGGGATCATCAAGAAACAGATCCTGAAGCACCTCTCCAGATTCACTAAAAACTTATCTCCTGACA
AAATAAACCTCAGCACCCTTAAAGGAGAGGGGGAGCTGAAGAACCTGGAGCTGGACGAGGAGGTGCTGCA
GAACATGCTGGACCTGCCCACCTGGCTGGCCATCAGCAAGGTGTTCTGCAATAAAGCCTCCATCAGGATT
CCATGGACAAAACTGAAAACACAGCCTATCTGTTTGTCTCTAGATAAGGTGATAATGGAGATGAGTACAT
GTGAAGAGCCACGAGCCCCTAACGGTCCGTCACCGATTGCAACTGCCTCAGGACAGAGTGAGTACGGCTT
TGCTGAGAAGGTTGTTGAGGGAATTACTGTTTCTGTCAACTCTATCGTCATCAGAATTGGAGCGAAAGCT
TTCAATGCTTCCTTTGAGCTTTCTCAGCTCCGTATCTACAGTGTCAATGCACAGTGGGAGCACGGAGACC
TGAGATTTACTCGGATTCAGGATCCGCAGAGAGGAGAGGTTTTGACATTTAAAGAAATAAATTGGCAGAT
GATTCGAATTGAGGCAGATGCTACCCAAAGTTCACATCTTGAAATTATGTGTGCTCCTGTTCGATTAATA
ACTAATCAGTCAAAAATCCGAGTCACCCTTAAAAGAAGATTAAAAGACTGCAATGTCATTGCAACAAAGT
TAGTTCTAATTCTGGATGATTTGTTATGGGTTTTAACGGATTCCCAGTTGAAGGCTATGGTGCAATATGC
AAAGTCTCTTAGTGAAGCAATAGAGAAATCAACGGAGCAAAGGAAGAGCATGGCTCCTGAACCTACTCAG
AGCTCTACAGTCACTTCATCTGCACAGCACGTCAAGACCCCACAGGCTGCCAATGCTCCCGACCTGAGTG
ATGCAATTGTGAAACTGTTCAATGACTTTGATGTGAAGGAAACCTCCCATCATCTAGTGATTTCCCATCT
AGATCTACACATCTGTGATGATATCCATGCAAAAGAAAAAGAGTCAAATAGACGCGTTAGTGGAGGTGCT
ATGCAACTCTCTTTCACACAGCTGACCATAGACTATTATCCTTATCATAAAGCAGGAGATAGTTGCAGTC
ACTGGATGTATTTCAGTGATGCAACTAAAACAAAAAACGGATGGGCTAATGAGTTGTTACATGAATTCGA
ATGCAACGTGGAAATGCTTAAGCAGGCCATGAAGGACCGTAATTTAGGTTCACCTCCTAAATCCCCGACA
CATGCCTCTCCCCAGCACACACAAACAGAGAAAGACTCAACTCTGAAAGGGACTCCTAAAACACCTTCAG
TATTACCTCAACCGTCAAAAGCTAAGCTCATGTCTAGTTCTGTTGTTGTTAGACTTGCAGATTTCAATAT
ATATCAGGTCTCTACAGCAGAACAATGTCGATCTTCCCCTAAAAGTATGATTTCCTGCAACAAAAAATCT
CTGTATCTTCCACAAGAAATGTCAGCTATCTATATAGAATTCACAGAATATTATTATCCAGATGGGAAGG
ATTTTCCAATTCCATCTCCCAACCTATATAGCCAGCTGAATGCTCTACAGTTTACTGTAGATGAAAGGAG
CATTCTGTGGTTAAACCAGTTTCTGCTGGATTTAAAACAAAGTCTTAATCAGTTCATGGCTGTGTACAAG
TTGAATGACAGCTCAAAATCCGATGAGCATGTTGACATCCGAGTTGACGGCTTAATGCTAAAGTTTGTCA
TTCCTTCTGAAGTGAAGGCAGGTTGCCATCAAGATCAGCCTCACACGGTGTCTATTCAGAGCTCTGAAAT
GATAGCCACCAACACGAGGCACTGTCCGAACTGCCGCCATTCTGATCTAGAAGCTTTGTGTCAAGACTTT
AAAGAGTGTGACTTTTTTAGCAAAACTTATACTAGATTCCCCAAATCCTGTGACAGTTTTAATCTTCTAC
ATCCCATCTTCCAGAGACATGCCCACGAACAAGATACCAAAATGCATGAGGTTTATAAAGGGAATATTAT
CCCTAAATTGAATAAAAACACTCTTAAAACATCTGCTGCCACCGATGTGTGGGCGGTGTACTTTTCCCAG
TTTTGGATAGACTATGAAGGGATGAAAAGCGGGAAGGGGCGGCCAGTAAGCTTTGTAGATGCTTTCCCTC
TGTCTATCTGGATTTGCCAGCCAACAAGATACGCAGAGCTACAGAAAGAGTTCCAGACTTGTGATCAAGT
GACCCTTAATACCTCACAAAGTGAGTCCAGTGATCTGGCTGGCCGAATGAAGAGGAAGAAACTCTTGAAG
GAGTATTACAGTACAGAGTCTGAGCCTCTGACAAATGGCGGCCAAAGACCTTCATCAGACACATTTTTAA
GGTTTTCCTCTTCCTCTTCAGATGCGGATGTTCATGTCTTGGTCCGTGTTCATAAACATGTCAGTATGCA
GATCAATCACTACCAATATCTGCTGCTGCTTTTCATACACGAGTCTCTCGTTCTGCTTTCGGATACCTTG
CGGAGGGATGTGGAAGCTGTGATTGGAAGCCCCGCTTCCCAGACTTCTGTTTGCGTTGGAATTTTACTTC
GCAGTGCGGAGCTTGCCCTGCTGCTTCATCCAGTGAATCCCACAAGTGCTCTGCGCTCTCCTGCTTCTGA
AAGTGGGAGCCCATTGCTTCCTGACTTCCTGCCAGCAGAAAATGGGGGGTTTTTGTCTTCAAAGAGAAAA
CAAGGTGGTAGTGGTATACACCGAATTAGAAATGCTACTCTCAATCACATGTCAGACAACAGGTCAATGA
GTGTTGACCTCAGCCACGCCCCTTTAAAGGATCCGTTGCTTTTCAAATCAGCCAGTGACACAAACCTGCA
AAAAGGCACTTCTTTTCTAGACTACTTATCAGATAAACATTTAGGGAAAATAAGTGAAGATGAAAGTAGT
GGACTTTCTCACAAGAGTGGCTCAGGAGAAATGACCTCAGAAGGGAGTCACACAAAGGATGTGGCTTCCA
CAGACTCAGATAGTGTCTTAAACTACAGAGATGGCTCAACTAGGCTTTCCCTGGATGATGACGGCAACCA
TAACCCACCTTCAAACCCTGTAACTGGTAAGGGAATTGACGCCATACACTCCATCTTCAGAGCTGAAGAC
TTCCTTCCTGAAGCAGCTTCCCTCTCTGAGAACCCGGAGAGCAGTAAAGAGGAGGCGCCCCCAGCCAGAG
CACCTAAATCCCAGACGTCCTTAAGTGCTAAATCTAAGGAACGTTGCCCACCCTCCCCAGCTCCACTCTC
TGTTTCCTACAAGAACATGAAAAGGAGCGCCTCACAGGTCTCCCTGGATACCCTTTCCCTGGACAGCATG
GTATTGGAAGAGCAGGCGGAGAGCGATGGAAGCGACAGCCACGTGTTGCTGGGGAAGGCAATGAAAAGGA
ACTCAAATACAAGCTGCCAGAGCCCAGCAGAGAGTGTGAACACAAGTGCAAATACGCAGACTTGTGGGGA
AGCCTCTCCAGAGGCTGTCAGCACCAACTCAGAGGGCACGCAGGAGAACCGCGACGATCTGATGTCAGTC
GTGGTGTTTAGAATCACTGGTGTTAATGGAGAAATTGACATCCGAGGGGAAGACACAGAAGTCTGTCTGC
AGGTGAACCAGGTGACGCCAAGTCAGTTAGGCAACGTCAGTCTGCGGCATTACCTTGGTAACCGTCCAGT
TGGTTCTGACCAGAAAGCTATAATTCATCCTAAATCCTCGCCTGAGATTTCTCTGAGGTTTGAAAGTGGG
CCAGGTGCTGTCGTGCACTCTCTGCTTGCAGAAAAAAATGGATTTCTCCAATGCCACATTGAGAACTTTA
CTACTGAGTTCCTTACCTCTTCCCTTCTGAATATTCAACACTTTCTGGAGGATGAAACTGTTGCAACAGT
AATGCCAATGAAAATACAAGTTTCTAACACAAAGATAAACTTGAAAGATGACAGTCCCCGGGGCAGCACG
GTGTCCCTGCAGCCGAGCCCTGTGACTGTGCATATTGACCGTCTCGTGGTGGAGAGGAGTGATGATGGCT
CTTTCCACATCAGAGATTCTCACCTGTTTAACACTGGGACTGATTTCAAAGACGGTGCCAGCAGTGATTC
AGTAGTGCGGACCCGGGGGATGTGTGACGTGAGGATGCACAGCAGTGTCACCCAAGCCACCCAGACGAGC
CCAGAGGTTCCTTTGCCTTCACAGTCAGCCAACTTTCTCGACATTACAAGGGAACAGCTCATGGAGGAAA
ACGAATGTCTCAGGCAGAGACTAGCTCAAGCTAAAATGGAGCTCGCGGAGGCTCACTCGGCCAGAGATGA
GCTTCTCCATCAAATGAAGAGGATGGGCCTGTAG

Translation (1457 aa):
MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAISKVFCNKASIRI
PWTKLKTQPICLSLDKVIMEMSTCEEPRAPNGPSPIATASGQSEYGFAEKVVEGITVSVNSIVIRIGAKA
FNASFELSQLRIYSVNAQWEHGDLRFTRIQDPQRGEVLTFKEINWQMIRIEADATQSSHLEIMCAPVRLI
TNQSKIRVTLKRRLKDCNVIATKLVLILDDLLWVLTDSQLKAMVQYAKSLSEAIEKSTEQRKSMAPEPTQ
SSTVTSSAQHVKTPQAANAPDLSDAIVKLFNDFDVKETSHHLVISHLDLHICDDIHAKEKESNRRVSGGA
MQLSFTQLTIDYYPYHKAGDSCSHWMYFSDATKTKNGWANELLHEFECNVEMLKQAMKDRNLGSPPKSPT
HASPQHTQTEKDSTLKGTPKTPSVLPQPSKAKLMSSSVVVRLADFNIYQVSTAEQCRSSPKSMISCNKKS
LYLPQEMSAIYIEFTEYYYPDGKDFPIPSPNLYSQLNALQFTVDERSILWLNQFLLDLKQSLNQFMAVYK
LNDSSKSDEHVDIRVDGLMLKFVIPSEVKAGCHQDQPHTVSIQSSEMIATNTRHCPNCRHSDLEALCQDF
KECDFFSKTYTRFPKSCDSFNLLHPIFQRHAHEQDTKMHEVYKGNIIPKLNKNTLKTSAATDVWAVYFSQ
FWIDYEGMKSGKGRPVSFVDAFPLSIWICQPTRYAELQKEFQTCDQVTLNTSQSESSDLAGRMKRKKLLK
EYYSTESEPLTNGGQRPSSDTFLRFSSSSSDADVHVLVRVHKHVSMQINHYQYLLLLFIHESLVLLSDTL
RRDVEAVIGSPASQTSVCVGILLRSAELALLLHPVNPTSALRSPASESGSPLLPDFLPAENGGFLSSKRK
QGGSGIHRIRNATLNHMSDNRSMSVDLSHAPLKDPLLFKSASDTNLQKGTSFLDYLSDKHLGKISEDESS
GLSHKSGSGEMTSEGSHTKDVASTDSDSVLNYRDGSTRLSLDDDGNHNPPSNPVTGKGIDAIHSIFRAED
FLPEAASLSENPESSKEEAPPARAPKSQTSLSAKSKERCPPSPAPLSVSYKNMKRSASQVSLDTLSLDSM
VLEEQAESDGSDSHVLLGKAMKRNSNTSCQSPAESVNTSANTQTCGEASPEAVSTNSEGTQENRDDLMSV
VVFRITGVNGEIDIRGEDTEVCLQVNQVTPSQLGNVSLRHYLGNRPVGSDQKAIIHPKSSPEISLRFESG
PGAVVHSLLAEKNGFLQCHIENFTTEFLTSSLLNIQHFLEDETVATVMPMKIQVSNTKINLKDDSPRGST
VSLQPSPVTVHIDRLVVERSDDGSFHIRDSHLFNTGTDFKDGASSDSVVRTRGMCDVRMHSSVTQATQTS
PEVPLPSQSANFLDITREQLMEENECLRQRLAQAKMELAEAHSARDELLHQMKRMGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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