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Report for CCDS35993.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35993.1 Public Mus musculus 10 Eef2 23 108 98 CCDS HistoryNCBI Gene:13629Re-query CCDS DB by CCDS ID:35993.1Re-query CCDS DB by GeneID:13629See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35993.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047864.10 ENSMUSP00000046101.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047864.10Link to Ensembl Protein Viewer:ENSMUSP00000046101.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000047864Re-query CCDS DB by Protein ID:ENSMUSP00000046101
Original member NCBI NM_007907.2 NP_031933.1 Updated not alive Link to Nucleotide Sequence:NM_007907.2Link to Protein Sequence:NP_031933.1Re-query CCDS DB by Nucleotide ID:NM_007907Re-query CCDS DB by Protein ID:NP_031933
Current member NCBI NM_007907.3 NP_031933.1 Accepted alive Link to Nucleotide Sequence:NM_007907.3Link to Protein Sequence:NP_031933.1Re-query CCDS DB by Nucleotide ID:NM_007907Re-query CCDS DB by Protein ID:NP_031933Link to BLAST:NP_031933.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031933.1 858 P58252 858 100% 0 0

Chromosomal Locations for CCDS 35993.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81176727 81176729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81177665 81177879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81178053 81178234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81178681 81178892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81179081 81179259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81179346 81179451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81179544 81179796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81179882 81180077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81180153 81180411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81180565 81180672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81180804 81181157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81181228 81181410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81181493 81181625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81181889 81182082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2577 nt):
ATGGTGAACTTCACAGTAGATCAGATCCGTGCCATCATGGACAAGAAAGCCAACATCCGGAACATGTCAG
TCATCGCCCATGTGGACCACGGCAAGTCCACGCTGACCGACTCCCTTGTGTGCAAGGCTGGCATCATTGC
CTCTGCCCGAGCTGGGGAGACGCGCTTCACTGACACTCGCAAGGATGAGCAGGAGCGCTGCATCACAATC
AAATCCACCGCCATCTCCCTCTTCTACGAGCTCTCTGAGAACGACCTGAACTTCATTAAGCAGAGCAAGG
ATGGCTCGGGCTTCCTCATCAACCTCATCGACTCTCCAGGCCATGTGGACTTCTCTTCAGAGGTGACAGC
TGCCTTGCGTGTCACCGATGGAGCTCTGGTGGTGGTGGACTGTGTGTCTGGCGTGTGTGTGCAGACAGAA
ACTGTGCTGCGCCAGGCCATCGCTGAACGCATCAAGCCCGTCCTGATGATGAACAAGATGGACCGGGCCC
TGCTGGAGCTGCAGCTGGAGCCCGAGGAGCTCTACCAGACCTTCCAGCGCATCGTGGAGAACGTCAACGT
CATCATCTCTACCTACGGCGAGGGCGAGAGTGGGCCCATGGGCAATATCATGATTGACCCCGTCCTGGGC
ACCGTAGGCTTTGGTTCTGGCCTGCATGGCTGGGCCTTCACCCTGAAGCAGTTTGCGGAGATGTATGTGG
CCAAGTTTGCAGCCAAGGGTGAGGGCCAGCTGAGCGCAGCCGAGCGTGCCAAGAAAGTAGAGGACATGAT
GAAGAAGCTGTGGGGAGACCGGTACTTTGATCCGGCCAATGGCAAGTTCAGTAAGTCAGCCAATAGCCCA
GATGGGAAAAAACTTCCCCGCACCTTCTGCCAGCTCATCCTGGACCCCATCTTCAAGGTGTTCGACGCCA
TCATGAACTTCAGGAAGGAGGAGACAGCCAAGCTGATCGAGAAGCTGGACATCAAGCTGGACAGCGAGGA
CAAAGACAAGGAGGGCAAGCCATTGCTCAAGGCTGTGATGCGCCGCTGGCTGCCTGCAGGGGACGCCCTC
CTGCAGATGATCACCATCCACTTACCATCCCCCGTCACTGCACAGAAGTACCGTTGTGAGCTGCTATACG
AGGGGCCTCCCGACGATGAGGCCGCCATGGGTATTAAGAGCTGCGACCCCAAAGGCCCACTTATGATGTA
CATTTCCAAGATGGTGCCAACCTCTGACAAAGGCCGCTTCTATGCCTTTGGTAGAGTGTTCTCTGGGGTG
GTGTCCACGGGCCTGAAGGTCCGGATCATGGGCCCCAACTACACGCCTGGGAAGAAAGAGGACCTATACC
TGAAGCCTATCCAGAGAACCATTCTGATGATGGGCCGCTACGTGGAGCCGATTGAGGACGTGCCATGTGG
AAACATTGTGGGGCTGGTCGGAGTGGACCAGTTCCTTGTGAAGACGGGGACCATCACTACCTTTGAGCAC
GCTCACAACATGCGCGTGATGAAGTTCAGCGTCAGCCCTGTCGTCCGTGTGGCAGTGGAGGCCAAGAACC
CAGCTGACCTGCCCAAGCTGGTGGAGGGGCTGAAGCGGCTGGCTAAGTCTGACCCTATGGTGCAGTGCAT
CATTGAGGAGTCTGGAGAACATATTATTGCTGGCGCCGGTGAGCTGCACCTGGAGATCTGCCTTAAGGAC
CTGGAGGAGGACCATGCCTGCATCCCCATCAAGAAATCTGACCCTGTTGTGTCATATCGGGAGACAGTCA
GTGAGGAATCCAACGTGCTGTGTCTGTCCAAGTCCCCCAATAAGCACAACCGGCTGTACATGAAGGCCAG
GCCCTTCCCTGATGGCCTGGCAGAGGACATCGATAAGGGTGAGGTGTCTGCCCGCCAGGAGCTCAAGGCA
CGTGCCCGCTACCTGGCCGAAAAGTATGAGTGGGACGTTGCTGAAGCCCGCAAGATCTGGTGCTTTGGCC
CTGATGGCACTGGCCCCAACATTCTCACCGACATCACCAAGGGTGTGCAGTACCTGAATGAGATCAAGGA
CAGTGTGGTGGCTGGCTTCCAGTGGGCTACTAAGGAGGGCGCTCTCTGTGAGGAAAACATGCGTGGTGTG
CGGTTTGATGTTCATGATGTGACCCTGCATGCTGATGCCATTCACCGGGGAGGTGGCCAGATCATCCCCA
CAGCACGCCGCTGCCTGTATGCCAGTGTGCTGACCGCACAGCCCCGCCTCATGGAGCCTATCTATCTGGT
GGAGATCCAGTGTCCTGAGCAAGTGGTGGGTGGCATCTACGGTGTCCTGAACAGGAAGCGTGGCCATGTG
TTTGAGGAGTCCCAGGTGGCTGGTACCCCCATGTTTGTGGTCAAGGCATACCTGCCTGTCAATGAGTCCT
TTGGCTTCACCGCTGATCTGCGATCCAACACCGGCGGCCAGGCCTTCCCCCAGTGCGTGTTTGACCACTG
GCAGATCCTGCCTGGGGATCCTTTTGACAACAGCAGCCGCCCCAGCCAAGTGGTAGCTGAGACGCGCAAG
CGCAAGGGCCTGAAAGAGGGCATCCCAGCGCTGGACAACTTCCTGGACAAACTGTAG

Translation (858 aa):
MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITI
KSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTE
TVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLG
TVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEGQLSAAERAKKVEDMMKKLWGDRYFDPANGKFSKSANSP
DGKKLPRTFCQLILDPIFKVFDAIMNFRKEETAKLIEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDAL
LQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGV
VSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH
AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKD
LEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKA
RARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGV
RFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHV
FEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRK
RKGLKEGIPALDNFLDKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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