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Report for CCDS35981.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35981.1 Public Mus musculus 10 Uqcr11 23 108 98 CCDS HistoryNCBI Gene:66594Re-query CCDS DB by CCDS ID:35981.1Re-query CCDS DB by GeneID:66594See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35981.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020372.5 ENSMUSP00000020372.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020372.5Link to Ensembl Protein Viewer:ENSMUSP00000020372.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000020372Re-query CCDS DB by Protein ID:ENSMUSP00000020372
Original member Current member NCBI NM_025650.2 NP_079926.1 Accepted alive Link to Nucleotide Sequence:NM_025650.2Link to Protein Sequence:NP_079926.1Re-query CCDS DB by Nucleotide ID:NM_025650Re-query CCDS DB by Protein ID:NP_079926Link to BLAST:NP_079926.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079926.1 56 Q9CPX8 56 100% 0 0

Chromosomal Locations for CCDS 35981.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80404166 80404286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80406696 80406745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (171 nt):
ATGCTGAGCAGGTTTCTAGGCCCGCGCTACCGGGAACTGGCCAGAAACTGGATTCCCACAGCCGGCATGT
GGGGCACTGTGGGTGCCGTGGGACTGGTGTGGGCCACGGACTGGCGGCTGATCCTGGACTGGGTGCCTTA
CATCAACGGCAAGTTTAAGAAGGACGATTAG

Translation (56 aa):
MLSRFLGPRYRELARNWIPTAGMWGTVGAVGLVWATDWRLILDWVPYINGKFKKDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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