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Report for CCDS35672.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35672.1 Public Mus musculus 1 Dtymk 23 108 98 CCDS HistoryNCBI Gene:21915Re-query CCDS DB by CCDS ID:35672.1Re-query CCDS DB by GeneID:21915See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35672.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112890.2 ENSMUSP00000108511.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112890.2Link to Ensembl Protein Viewer:ENSMUSP00000108511.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112890Re-query CCDS DB by Protein ID:ENSMUSP00000108511
Original member Current member NCBI NM_023136.2 NP_075625.1 Accepted alive Link to Nucleotide Sequence:NM_023136.2Link to Protein Sequence:NP_075625.1Re-query CCDS DB by Nucleotide ID:NM_023136Re-query CCDS DB by Protein ID:NP_075625Link to BLAST:NP_075625.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075625.1 80 P97930-2 80 100% 0 0

Chromosomal Locations for CCDS 35672.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 93800798 93800910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93801698 93801827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (243 nt):
ATGGCGTCGCGTCGGGGAGCGCTCATCGTGCTGGAGGGTGTGGACCGTGCTGGCAAGACCACGCAGGGCC
TCAAGCTGGTGACCGCGCTGTGCGCCTCGGGCCACAGAGCGGAGCTGCTGCGTTTCCCCGAAAGATCAAC
GGAAATCGGCAAGCTTCTGAATTCCTACTTGGAAAAGAAAACGGAACTAGAGGATCACTCCGTGCACCTG
CTCTTCTCTGCAAACCGCTGGGAACAAGTGTAA

Translation (80 aa):
MASRRGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTELEDHSVHL
LFSANRWEQV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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