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Report for CCDS35132.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35132.1 Public Homo sapiens 9 OR1K1 24 110 108 CCDS HistoryNCBI Gene:392392Re-query CCDS DB by CCDS ID:35132.1Re-query CCDS DB by GeneID:392392See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 35132.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000277309.3 ENSP00000277309.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000277309.3Link to Ensembl Protein Viewer:ENSP00000277309.2Re-query CCDS DB by Nucleotide ID:ENST00000277309Re-query CCDS DB by Protein ID:ENSP00000277309
Original member Current member NCBI NM_080859.1 NP_543135.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_080859.1Link to Protein Sequence:NP_543135.1Re-query CCDS DB by Nucleotide ID:NM_080859Re-query CCDS DB by Protein ID:NP_543135Link to BLAST:NP_543135.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_543135.1 316 Q8NGR3 316 100% 0 0

Chromosomal Locations for CCDS 35132.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 122800123 122801073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGAGGCTGCCAATGAGTCTTCAGAGGGAATCTCATTCGTTTTATTGGGACTGACAACAAGTCCTGGAC
AGCAGCGGCCTCTCTTTGTGCTGTTCTTGCTCTTGTATGTGGCCAGCCTCCTGGGTAATGGACTCATTGT
GGCTGCCATCCAGGCCAGTCCAGCCCTTCATGCACCCATGTACTTCCTGCTGGCCCACCTGTCCTTTGCT
GACCTCTGCTTCGCCTCCGTCACTGTGCCCAAGATGTTGGCCAACTTGTTGGCCCATGACCACTCCATCT
CGCTGGCTGGCTGCCTGACCCAAATGTACTTCTTCTTTGCCCTGGGGGTAACTGATAGCTGTCTTCTGGC
GGCCATGGCCTATGACTGCTACGTGGCCATCCGGCACCCCCTCCCCTATGCCACGAGGATGTCCCGGGCC
ATGTGCGCAGCCCTGGTGGGAATGGCATGGCTGGTGTCCCACGTCCACTCCCTCCTGTATATCCTGCTCA
TGGCTCGCTTGTCCTTCTGTGCTTCCCACCAAGTGCCCCACTTCTTCTGTGACCACCAGCCTCTCTTAAG
GCTCTCGTGCTCTGACACCCACCACATCCAGCTGCTCATCTTCACCGAGGGCGCCGCAGTGGTGGTCACT
CCCTTCCTGCTCATCCTCGCCTCCTATGGGGCCATCGCAGCTGCCGTGCTCCAGCTGCCCTCAGCCTCTG
GGAGGCTCCGGGCTGTGTCCACCTGTGGCTCCCACCTGGCTGTGGTGAGCCTCTTCTATGGGACAGTCAT
TGCAGTCTACTTCCAGGCCACATCCCGACGCGAGGCAGAGTGGGGCCGTGTGGCCACTGTCATGTACACT
GTAGTCACCCCCATGCTGAACCCCATCATCTACAGCCTCTGGAATCGCGATGTACAGGGGGCACTCCGAG
CCCTTCTCATTGGGCGAAGGATCTCAGCTAGTGACTCCTGA

Translation (316 aa):
MEAANESSEGISFVLLGLTTSPGQQRPLFVLFLLLYVASLLGNGLIVAAIQASPALHAPMYFLLAHLSFA
DLCFASVTVPKMLANLLAHDHSISLAGCLTQMYFFFALGVTDSCLLAAMAYDCYVAIRHPLPYATRMSRA
MCAALVGMAWLVSHVHSLLYILLMARLSFCASHQVPHFFCDHQPLLRLSCSDTHHIQLLIFTEGAAVVVT
PFLLILASYGAIAAAVLQLPSASGRLRAVSTCGSHLAVVSLFYGTVIAVYFQATSRREAEWGRVATVMYT
VVTPMLNPIIYSLWNRDVQGALRALLIGRRISASDS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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