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Report for CCDS34778.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34778.1 Public Homo sapiens 7 GIMAP6 24 110 108 CCDS HistoryNCBI Gene:474344Re-query CCDS DB by CCDS ID:34778.1Re-query CCDS DB by GeneID:474344See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34778.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328902.9 ENSP00000330374.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328902.9Link to Ensembl Protein Viewer:ENSP00000330374.5Re-query CCDS DB by Nucleotide ID:ENST00000328902Re-query CCDS DB by Protein ID:ENSP00000330374
Original member Current member NCBI NM_024711.6 NP_078987.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024711.6Link to Protein Sequence:NP_078987.3Re-query CCDS DB by Nucleotide ID:NM_024711Re-query CCDS DB by Protein ID:NP_078987Link to BLAST:NP_078987.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078987.3 292 Q6P9H5-1 292 100% 0 0

Chromosomal Locations for CCDS 34778.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 150627719 150628512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150630058 150630142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGGAGGAAGAAGAATATGAACAAATTCCCCAGGAGAATCCCCCAGAAGAGCTGTCCCAGGATCCTGTGC
TGGAGCTGTCAGGAGGTCTAAGGGAGAAAGAACAGAAGACCCCAAGGAGACTGAGGCTCATTCTCATGGG
GAAAACAGGGAGTGGGAAGAGTGCAACAGGAAACAGCATCCTCGGCAGGGACGTCTTCGAGTCTAAACTC
AGCACCAGACCCGTGACCAAGACCTCCCAGAGACGGAGCCGAGAGTGGGCTGGGAAGGAGCTTGAGGTGA
TTGACACACCCAACATTCTGTCCCCCCAGGTCTCGCCAGAGGTGGCAGACGCTATCTGCCAAGCCATCGT
CTTATCCGCCCCAGGGCCCCACGCCGTGCTCCTGGTGACACAACTGGGCCGGTTCACGGATGAGGATCAG
CAGGTGGTCAGGCGCCTGCAGGAGGTCTTTGGAGTGGGGGTTCTGGGTCACACCATCCTGGTGTTCACCC
GGAAGGAAGACCTGGCTGGCGGCTCCCTGGAAGACTATGTGCGAGAGACCAACAACCAGGCCCTTGCCTG
GCTGGATGTGACCCTTGCACGGCGCCATTGCGGCTTCAACAACAGGGCACAGGGGGAGGAGCAGGAGGCC
CAACTGCGAGAGCTCATGGAGAAAGTTGAAGCCATTATGTGGGAAAACGAAGGAGATTATTACAGCAACA
AGGCTTACCAATATACCCAGCAAAACTTTCGGCTGAAAGAACTACAGGAAAGGCAAGTAAGCCAGGGCCA
AGGCTCTGAGGACGTGCCTGGTGAGGAGTCTTGGCTGGAAGGACTGTCCCAGATCCAGAAGGAATCTGAG
GAAGCCCACAGATGCCTGCTGGGGAAGGCTGACCTTTGA

Translation (292 aa):
MEEEEYEQIPQENPPEELSQDPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFESKL
STRPVTKTSQRRSREWAGKELEVIDTPNILSPQVSPEVADAICQAIVLSAPGPHAVLLVTQLGRFTDEDQ
QVVRRLQEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQEA
QLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQGSEDVPGEESWLEGLSQIQKESE
EAHRCLLGKADL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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