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Report for CCDS34770.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34770.1 Public Homo sapiens 7 ARHGEF35 24 110 108 CCDS HistoryNCBI Gene:445328Re-query CCDS DB by CCDS ID:34770.1Re-query CCDS DB by GeneID:445328See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34770.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378115.3 ENSP00000367355.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378115.3Link to Ensembl Protein Viewer:ENSP00000367355.3Re-query CCDS DB by Nucleotide ID:ENST00000378115Re-query CCDS DB by Protein ID:ENSP00000367355
Original member Current member EBI ENST00000688754.1 ENSP00000510684.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000688754.1Link to Ensembl Protein Viewer:ENSP00000510684.1Re-query CCDS DB by Nucleotide ID:ENST00000688754Re-query CCDS DB by Protein ID:ENSP00000510684
Original member Current member NCBI NM_001003702.3 NP_001003702.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001003702.3Link to Protein Sequence:NP_001003702.2Re-query CCDS DB by Nucleotide ID:NM_001003702Re-query CCDS DB by Protein ID:NP_001003702Link to BLAST:NP_001003702.2
Original member Current member NCBI NM_001368318.1 NP_001355247.1 Accepted alive Link to Nucleotide Sequence:NM_001368318.1Link to Protein Sequence:NP_001355247.1Re-query CCDS DB by Nucleotide ID:NM_001368318Re-query CCDS DB by Protein ID:NP_001355247Link to BLAST:NP_001355247.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003702.2 484 A5YM69 484 100% 0 0
NP_001355247.1 484 A5YM69 484 100% 0 0

Chromosomal Locations for CCDS 34770.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 144186929 144188383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1455 nt):
ATGGAGGCTGAGGAGGCCCAGCATGGAGCCTCTCCTCCCATCTCTGCCATAGAGGAATTCAGCATTATCC
CTGAGGCTCCCATGAGGAGCAGCCAGGTCTCTGCCTTGGGGCTTGAAGCTCAAGAAGATGAGGACCCATC
CTATAAGTGGAGAGAGGAACACAGACTCTCAGCAACTCAGCAGAGTGAGTTAAGGGATGTGTGTGACTAT
GCGATTGAGACGATGCCCTCTTTTCCCAAGGAAGGTTCTGCAGATGTGGAGCCCAATCAGGAAAGCCTTG
TGGCTGAGGCCTGTGACACTCCGGAACACTGGGAGGCAGTACCCCAGAGCCTAGCAGGCCGACAAGCAAG
GACTCTAGCTCCCCCAGAGCTCTGGGCCTGCCCCATTCAGAGTGAGCATCTAGACATGGCCCCATTTTCC
AGTGACCTGGGAAGCGAAGAAGAGGAGGTGGAATTTTGGCCAGGACTTACTTCTTTGACATTGGGATCTG
GACAGGCAGAAGAAGAAGAGGAAACCTCTTCAGATAACTCTGGTCAGACCAGATATTATTCTCCCTGCGA
AGAGCATCCTGCAGAGACCAACCAGAATGAAGGCGCTGAAAGTGGGACTATCAGGCAGGGGGAAGAGCTG
CCATCTGAGGAGCTGCAGGAAAGTCAAGGGCTCTTGCATCCCCAGGAGGTCCAAGTTCTGGAGGAGCAGG
GACAGCAGGAAGCAGGATTTCGGGGGGAAGGAACTCTGAGGGAGGATGTTTGTGCCGATGGGCTATTAGG
GGAGGAACAGATGATAGAGCAGGTTAATGATGAAAAGGGAGAACAGAAGCAAAAACAGGAACAGGTACAA
GATGTGATGCTTGGGAGACAAGGAGAAAGAATGGGGCTCACTGGGGAGCCAGAGGGTCTGAATGACGGTG
AGTGGGAGCAGGAGGATATGGAGAGGAAGGCTCAGGGTCAGGGAGGTCCAGAACAGGGAGAAGAGAGGAA
GAGGGAGCTGCAGGTGCCAGAAGAGAACAGGGCGGACTCTCAGGACGAAAAGAGTCAAACCTTTTTGGGA
AAATCAGAGGAAGTAACTGGAAAGCAAGAAGATCATGGTATAAAGGAGAAAGGGGTCCCAGTCAGCGGGC
AGGAGGCGAAAGAGCCAGAGAGTTGGGATGGGGGCAGGCTGGGGGCAGTGGGAAGAGCGAGGAGCAGGGA
AGAGGAGAATGAGCATCATGGGCCTTCAATGCCCGCTCTGATAGCCCCTGAGGACTCTCCTCACTGTGAC
CTGTTTCCAGGTGCCTCATATCTCGTGACTCAGATTCCCGGGACTCAGACAGAGTCCAGGGCTGAGGAAC
TGTCCCCCGCAGCTCTGTCTCCCTTGCTAGAGCCCATCAGATGCTCTCACCAGCCCATTTCTCTACTGGG
CTCCTTTTTGACTGAGGAGTCACCTGACAAGGAAAAACTTCTATCAGTACTTTGA

Translation (484 aa):
MEAEEAQHGASPPISAIEEFSIIPEAPMRSSQVSALGLEAQEDEDPSYKWREEHRLSATQQSELRDVCDY
AIETMPSFPKEGSADVEPNQESLVAEACDTPEHWEAVPQSLAGRQARTLAPPELWACPIQSEHLDMAPFS
SDLGSEEEEVEFWPGLTSLTLGSGQAEEEEETSSDNSGQTRYYSPCEEHPAETNQNEGAESGTIRQGEEL
PSEELQESQGLLHPQEVQVLEEQGQQEAGFRGEGTLREDVCADGLLGEEQMIEQVNDEKGEQKQKQEQVQ
DVMLGRQGERMGLTGEPEGLNDGEWEQEDMERKAQGQGGPEQGEERKRELQVPEENRADSQDEKSQTFLG
KSEEVTGKQEDHGIKEKGVPVSGQEAKEPESWDGGRLGAVGRARSREEENEHHGPSMPALIAPEDSPHCD
LFPGASYLVTQIPGTQTESRAEELSPAALSPLLEPIRCSHQPISLLGSFLTEESPDKEKLLSVL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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