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Report for CCDS34708.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34708.1 Public Homo sapiens 7 GIGYF1 24 110 108 CCDS HistoryNCBI Gene:64599Re-query CCDS DB by CCDS ID:34708.1Re-query CCDS DB by GeneID:64599See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34708.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000275732.5 ENSP00000275732.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000275732.5Link to Ensembl Protein Viewer:ENSP00000275732.4Re-query CCDS DB by Nucleotide ID:ENST00000275732Re-query CCDS DB by Protein ID:ENSP00000275732
Original member Current member EBI ENST00000646601.1 ENSP00000494292.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646601.1Link to Ensembl Protein Viewer:ENSP00000494292.1Re-query CCDS DB by Nucleotide ID:ENST00000646601Re-query CCDS DB by Protein ID:ENSP00000494292
Original member Current member EBI ENST00000678049.1 ENSP00000503354.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000678049.1Link to Ensembl Protein Viewer:ENSP00000503354.1Re-query CCDS DB by Nucleotide ID:ENST00000678049Re-query CCDS DB by Protein ID:ENSP00000503354
Original member Current member NCBI NM_001375765.1 NP_001362694.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001375765.1Link to Protein Sequence:NP_001362694.1Re-query CCDS DB by Nucleotide ID:NM_001375765Re-query CCDS DB by Protein ID:NP_001362694Link to BLAST:NP_001362694.1
Original member Current member NCBI NM_001375766.1 NP_001362695.1 Accepted alive Link to Nucleotide Sequence:NM_001375766.1Link to Protein Sequence:NP_001362695.1Re-query CCDS DB by Nucleotide ID:NM_001375766Re-query CCDS DB by Protein ID:NP_001362695Link to BLAST:NP_001362695.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001362694.1 1035 O75420 1035 100% 0 0
NP_001362695.1 1035 O75420 1035 100% 0 0

Chromosomal Locations for CCDS 34708.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100681719 100681771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100681864 100681993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100682072 100682235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100682322 100682482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100682590 100682777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100683012 100683230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100683304 100683444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100683550 100683632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100683818 100683918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100684020 100684157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100684237 100684337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100684450 100684616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100684723 100684894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100685049 100685146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100685344 100685481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100685974 100686079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100686180 100686433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100686649 100686819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100687006 100687046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100687298 100687406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100687505 100687616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100687788 100687883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100687981 100688110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100688204 100688238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3108 nt):
ATGGCAGCAGAGACACTCAACTTTGGGCCTGAGTGGCTCAGGGCCCTGTCCGGGGGCGGCAGCGTGGCCT
CCCCACCCCCGTCCCCTGCCATGCCCAAATACAAGCTGGCTGACTACCGTTATGGGCGAGAGGAAATGCT
GGCTCTCTACGTCAAGGAGAACAAGGTCCCGGAAGAGCTGCAGGACAAGGAGTTCGCCGCGGTGCTGCAG
GACGAGCCACTGCAGCCCCTGGCTCTGGAGCCGCTGACTGAGGAGGAACAGAGAAACTTCTCCCTGTCAG
TGAACAGCGTGGCTGTGCTGAGGCTGATGGGGAAAGGGGCTGGCCCCCCCCTGGCTGGCACCTCCCGAGG
CAGGGGCAGCACGCGGAGCCGAGGCCGCGGCCGTGGTGACAGCTGCTTTTACCAAAGAAGCATCGAAGAA
GGCGATGGGGCCTTTGGACGAAGCCCCCGGGAAATCCAGCGCAGCCAGAGCTGGGATGACAGAGGCGAGA
GGCGGTTTGAGAAGTCAGCAAGGCGGGATGGAGCACGATGTGGCTTTGAGGAGGGAGGGGCTGGCCCAAG
GAAGGAGCACGCCCGCTCAGACAGCGAGAACTGGCGCTCCCTACGGGAGGAACAGGAGGAGGAGGAGGAG
GGCAGCTGGAGGCTCGGAGCAGGGCCCCGGCGAGACGGCGACCGCTGGCGCTCCGCCAGCCCTGATGGTG
GTCCCCGCTCTGCTGGCTGGCGGGAACATGGGGAACGGCGGCGCAAGTTTGAATTTGATTTGCGAGGGGA
TCGAGGAGGGTGTGGTGAAGAGGAGGGGCGGGGAGGGGGAGGCAGCTCTCACCTGCGGCGGTGCCGAGCG
CCTGAAGGCTTTGAGGAGGACAAGGATGGGCTCCCAGAGTGGTGCCTGGACGATGAGGATGAAGAAATGG
GCACCTTTGATGCCTCTGGGGCCTTCTTGCCTCTCAAGAAGGGCCCCAAGGAGCCCATTCCTGAGGAGCA
GGAGCTGGACTTCCAAGGGTTGGAGGAGGAGGAGGAACCTTCCGAAGGGCTAGAGGAGGAAGGGCCTGAG
GCAGGTGGGAAAGAGCTGACCCCACTGCCTCCTCAGGAGGAGAAGTCCAGCTCCCCATCCCCACTGCCCA
CCCTGGGCCCACTCTGGGGGACAAACGGGGATGGGGACGAAACTGCAGAGAAAGAGCCCCCAGCGGCCGA
AGATGATATTCGGGGGATCCAGCTGAGTCCCGGGGTGGGCTCCTCTGCTGGCCCACCCGGAGATCTGGAG
GATGATGAAGGCTTGAAGCACCTGCAGCAGGAGGCGGAGAAGCTGGTGGCCTCCCTGCAGGACAGCTCCT
TGGAGGAGGAGCAGTTCACGGCTGCCATGCAGACCCAGGGCCTGCGCCACTCTGCAGCCGCCACTGCCCT
CCCGCTCAGCCATGGGGCTGCCCGGAAGTGGTTCTACAAGGACCCACAGGGCGAGATCCAAGGCCCCTTC
ACGACACAGGAGATGGCAGAGTGGTTCCAGGCCGGCTACTTTTCCATGTCACTGCTGGTGAAGCGGGGCT
GCGATGAGGGCTTCCAGCCGCTGGGCGAGGTGATCAAGATGTGGGGCCGCGTGCCCTTTGCCCCAGGGCC
CTCACCTCCCCCACTGCTGGGAAACATGGACCAGGAGCGGCTGAAGAAGCAACAGGAGCTGGCCGCGGCG
GCCTTGTACCAGCAGCTGCAGCACCAGCAGTTTCTCCAGCTGGTCAGCAGCCGCCAGCTCCCACAGTGCG
CGCTCCGAGAAAAGGCAGCTCTGGGGGACCTGACACCGCCACCACCGCCGCCGCCACAGCAGCAGCAGCA
GCAGCTCACGGCATTCCTGCAGCAGCTCCAGGCGCTCAAACCCCCCAGAGGCGGGGACCAGAACCTGCTC
CCGACGATGAGCCGGTCCTTGTCGGTGCCAGATTCGGGCCGCCTCTGGGACGTACATACCTCAGCCTCAT
CACAGTCAGGTGGTGAGGCCAGTCTTTGGGACATACCAATTAACTCTTCGACTCAGGGTCCAATTCTAGA
ACAACTCCAGCTGCAACATAAATTCCAGGAGCGCAGAGAAGTGGAGCTCAGGGCGAAGCGGGAGGAAGAG
GAACGCAAGCGTCGAGAGGAGAAGCGCCGCCAGCAGCAGCAGGAGGAGCAGAAGCGGCGGCAGGAGGAGG
AAGAGCTGTTTCGGCGCAAGCACGTGCGGCAGCAGGAGCTATTGCTGAAGTTGCTACAGCAGCAGCAGGC
GGTCCCTGTGCCCCCCGCACCCAGCTCCCCGCCCCCACTCTGGGCTGGCCTGGCCAAGCAGGGGCTGTCC
ATGAAGACGCTCCTGGAGTTGCAGCTGGAGGGCGAGCGGCAGCTGCACAAACAGCCCCCACCTCGGGAGC
CAGCTCGGGCCCAGGCCCCCAACCACCGAGTGCAGCTTGGGGGCCTGGGCACTGCCCCCCTGAACCAGTG
GGTGTCTGAGGCTGGGCCACTGTGGGGCGGGCCAGACAAGAGTGGGGGCGGCAGCAGCGGCCTGGGGCTC
TGGGAGGACACCCCCAAGAGCGGCGGGAGCCTGGTCCGTGGCCTCGGCCTGAAGAACAGCCGGAGCAGCC
CATCTCTCAGTGACTCATACAGCCACCTATCGGGTCGGCCCATTCGCAAAAAGACGGAGGAAGAAGAGAA
GCTGCTGAAGCTGCTGCAGGGCATTCCCAGGCCCCAGGACGGCTTCACCCAGTGGTGCGAGCAGATGCTG
CACACGCTGAGCGCCACGGGCAGCCTGGACGTGCCCATGGCTGTAGCGATCCTCAAGGAGGTGGAATCCC
CCTATGATGTCCACGATTATATCCGTTCCTGCCTGGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACA
ATTCCTGGAGCGGAGGGCCAAGCAGAAAGCCAGCCAGCAGCGGCAGCAGCAGCAGGAGGCATGGCTGAGC
AGCGCCTCGCTGCAGACGGCCTTCCAGGCCAACCACAGCACCAAACTCGGCCCCGGGGAGGGCAGCAAGG
CCAAGAGGCGGGCACTGATGCTGCACTCAGACCCCAGCATCCTGGGGTACTCCCTGCACGGATCTTCTGG
TGAGATCGAGAGCGTGGATGACTACTGA

Translation (1035 aa):
MAAETLNFGPEWLRALSGGGSVASPPPSPAMPKYKLADYRYGREEMLALYVKENKVPEELQDKEFAAVLQ
DEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGPPLAGTSRGRGSTRSRGRGRGDSCFYQRSIEE
GDGAFGRSPREIQRSQSWDDRGERRFEKSARRDGARCGFEEGGAGPRKEHARSDSENWRSLREEQEEEEE
GSWRLGAGPRRDGDRWRSASPDGGPRSAGWREHGERRRKFEFDLRGDRGGCGEEEGRGGGGSSHLRRCRA
PEGFEEDKDGLPEWCLDDEDEEMGTFDASGAFLPLKKGPKEPIPEEQELDFQGLEEEEEPSEGLEEEGPE
AGGKELTPLPPQEEKSSSPSPLPTLGPLWGTNGDGDETAEKEPPAAEDDIRGIQLSPGVGSSAGPPGDLE
DDEGLKHLQQEAEKLVASLQDSSLEEEQFTAAMQTQGLRHSAAATALPLSHGAARKWFYKDPQGEIQGPF
TTQEMAEWFQAGYFSMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLGNMDQERLKKQQELAAA
ALYQQLQHQQFLQLVSSRQLPQCALREKAALGDLTPPPPPPPQQQQQQLTAFLQQLQALKPPRGGDQNLL
PTMSRSLSVPDSGRLWDVHTSASSQSGGEASLWDIPINSSTQGPILEQLQLQHKFQERREVELRAKREEE
ERKRREEKRRQQQQEEQKRRQEEEELFRRKHVRQQELLLKLLQQQQAVPVPPAPSSPPPLWAGLAKQGLS
MKTLLELQLEGERQLHKQPPPREPARAQAPNHRVQLGGLGTAPLNQWVSEAGPLWGGPDKSGGGSSGLGL
WEDTPKSGGSLVRGLGLKNSRSSPSLSDSYSHLSGRPIRKKTEEEEKLLKLLQGIPRPQDGFTQWCEQML
HTLSATGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERRAKQKASQQRQQQQEAWLS
SASLQTAFQANHSTKLGPGEGSKAKRRALMLHSDPSILGYSLHGSSGEIESVDDY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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